Protein–RNA interactions for Protein: Q8WUY3

PRUNE2, Protein prune homolog 2, humanhuman

Predictions only

Length 3,088 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRUNE2Q8WUY3 EMILIN3-201ENST00000332312 3796 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
PRUNE2Q8WUY3 MIR503HG-202ENST00000440570 760 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
PRUNE2Q8WUY3 AC061961.1-201ENST00000443901 432 ntTSL 3 BASIC16.42■□□□□ 0.22
PRUNE2Q8WUY3 AL161670.2-201ENST00000557650 1227 ntBASIC16.42■□□□□ 0.22
PRUNE2Q8WUY3 SMIM22-211ENST00000615889 1047 ntAPPRIS P4 TSL 5 BASIC16.42■□□□□ 0.22
PRUNE2Q8WUY3 GOLGA2P7-201ENST00000316967 2525 ntTSL 2 BASIC16.42■□□□□ 0.22
PRUNE2Q8WUY3 HNRNPR-204ENST00000427764 1788 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
PRUNE2Q8WUY3 SLC41A3-211ENST00000508835 1480 ntTSL 2 BASIC16.42■□□□□ 0.22
PRUNE2Q8WUY3 XRCC1-202ENST00000543982 1994 ntTSL 2 BASIC16.42■□□□□ 0.22
PRUNE2Q8WUY3 CHRDL1-205ENST00000482160 1537 ntTSL 2 BASIC16.42■□□□□ 0.22
PRUNE2Q8WUY3 SUPT20H-203ENST00000360252 2843 ntAPPRIS P3 TSL 1 (best) BASIC16.42■□□□□ 0.22
PRUNE2Q8WUY3 C14orf180-202ENST00000410013 2009 ntAPPRIS P3 TSL 1 (best) BASIC16.42■□□□□ 0.22
PRUNE2Q8WUY3 TP73-AS1-203ENST00000423764 2875 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
PRUNE2Q8WUY3 HYAL1-204ENST00000395144 2081 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
PRUNE2Q8WUY3 PPP1CC-201ENST00000335007 2559 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
PRUNE2Q8WUY3 ALG1L2-201ENST00000425059 969 ntAPPRIS P1 TSL 5 BASIC16.42■□□□□ 0.22
PRUNE2Q8WUY3 VEGFB-202ENST00000426086 979 ntAPPRIS ALT1 TSL 1 (best) BASIC16.42■□□□□ 0.22
PRUNE2Q8WUY3 AC073413.1-201ENST00000603927 732 ntBASIC16.42■□□□□ 0.22
PRUNE2Q8WUY3 AC087045.2-201ENST00000606279 1003 ntBASIC16.42■□□□□ 0.22
PRUNE2Q8WUY3 HTR4-213ENST00000631296 1224 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
PRUNE2Q8WUY3 EIF4H-201ENST00000265753 2679 ntAPPRIS P4 TSL 2 BASIC16.42■□□□□ 0.22
PRUNE2Q8WUY3 C8orf33-201ENST00000331434 2677 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
PRUNE2Q8WUY3 HIPK1-207ENST00000369561 3777 ntTSL 5 BASIC16.42■□□□□ 0.22
PRUNE2Q8WUY3 KRT8P35-201ENST00000483942 1338 ntBASIC16.42■□□□□ 0.22
PRUNE2Q8WUY3 GSDMA-203ENST00000635792 1546 ntAPPRIS P1 TSL 5 BASIC16.42■□□□□ 0.22
PRUNE2Q8WUY3 HYMAI-201ENST00000635591 3347 ntBASIC16.42■□□□□ 0.22
PRUNE2Q8WUY3 SSUH2-202ENST00000341795 1799 ntAPPRIS P3 TSL 1 (best) BASIC16.42■□□□□ 0.22
PRUNE2Q8WUY3 SLC35E4-201ENST00000343605 2714 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
PRUNE2Q8WUY3 AKTIP-202ENST00000394657 2426 ntAPPRIS P3 TSL 2 BASIC16.42■□□□□ 0.22
PRUNE2Q8WUY3 BST2-201ENST00000252593 1019 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
PRUNE2Q8WUY3 PRSS55-201ENST00000328655 1124 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
PRUNE2Q8WUY3 AC078991.1-201ENST00000437297 610 ntBASIC16.42■□□□□ 0.22
PRUNE2Q8WUY3 AC103988.2-201ENST00000561804 725 ntBASIC16.42■□□□□ 0.22
PRUNE2Q8WUY3 AC008537.4-201ENST00000595728 1103 ntTSL 5 BASIC16.42■□□□□ 0.22
PRUNE2Q8WUY3 LINC00595-204ENST00000434974 2692 ntTSL 2 BASIC16.42■□□□□ 0.22
PRUNE2Q8WUY3 WDR25-202ENST00000402312 1969 ntAPPRIS P1 TSL 2 BASIC16.41■□□□□ 0.22
PRUNE2Q8WUY3 INSIG1-201ENST00000340368 3010 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
PRUNE2Q8WUY3 PAX4-202ENST00000341640 2010 ntAPPRIS P2 TSL 1 (best) BASIC16.41■□□□□ 0.22
PRUNE2Q8WUY3 NEU3-206ENST00000532963 1643 ntTSL 2 BASIC16.41■□□□□ 0.22
PRUNE2Q8WUY3 PACRGL-202ENST00000360916 2073 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
PRUNE2Q8WUY3 HS3ST2-201ENST00000261374 2314 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
PRUNE2Q8WUY3 PPP4R3A-208ENST00000555462 3236 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
PRUNE2Q8WUY3 MIDN-206ENST00000591446 3243 ntAPPRIS P2 TSL 1 (best) BASIC16.41■□□□□ 0.22
PRUNE2Q8WUY3 SSR4-201ENST00000320857 1671 ntAPPRIS P1 TSL 2 BASIC16.41■□□□□ 0.22
PRUNE2Q8WUY3 ARF5-201ENST00000000233 1103 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
PRUNE2Q8WUY3 ACYP1-201ENST00000238618 627 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
PRUNE2Q8WUY3 LINC01433-201ENST00000419003 697 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
PRUNE2Q8WUY3 AL355483.2-201ENST00000421637 675 ntTSL 3 BASIC16.41■□□□□ 0.22
PRUNE2Q8WUY3 FTLP5-201ENST00000586853 534 ntBASIC16.41■□□□□ 0.22
PRUNE2Q8WUY3 AC107373.2-201ENST00000607735 490 ntBASIC16.41■□□□□ 0.22
PRUNE2Q8WUY3 NEU1-206ENST00000375631 2045 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
PRUNE2Q8WUY3 STK4-AS1-201ENST00000434401 2065 ntTSL 2 BASIC16.41■□□□□ 0.22
PRUNE2Q8WUY3 FAM168A-204ENST00000450446 1364 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
PRUNE2Q8WUY3 PTGDR-201ENST00000306051 2942 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
PRUNE2Q8WUY3 TXNRD2-218ENST00000542719 2024 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
PRUNE2Q8WUY3 SPACA3-201ENST00000269053 817 ntAPPRIS P2 TSL 1 (best) BASIC16.41■□□□□ 0.22
PRUNE2Q8WUY3 IQCF3-203ENST00000444293 450 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
PRUNE2Q8WUY3 AC019193.1-201ENST00000506678 823 ntBASIC16.41■□□□□ 0.22
PRUNE2Q8WUY3 SPACA3-205ENST00000580599 949 ntAPPRIS ALT2 TSL 1 (best) BASIC16.41■□□□□ 0.22
PRUNE2Q8WUY3 SPHK2-211ENST00000600537 2136 ntAPPRIS ALT2 TSL 2 BASIC16.41■□□□□ 0.22
PRUNE2Q8WUY3 C20orf202-201ENST00000400633 1604 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
PRUNE2Q8WUY3 AGBL5-202ENST00000360131 3177 ntAPPRIS P3 TSL 1 (best) BASIC16.41■□□□□ 0.22
PRUNE2Q8WUY3 RNF165-204ENST00000587853 2011 ntTSL 5 BASIC16.41■□□□□ 0.22
PRUNE2Q8WUY3 AC010478.1-202ENST00000559112 2367 ntTSL 2 BASIC16.41■□□□□ 0.22
PRUNE2Q8WUY3 TUBB8-201ENST00000561967 1413 ntTSL 5 BASIC16.41■□□□□ 0.22
PRUNE2Q8WUY3 CYP2S1-201ENST00000310054 2782 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
PRUNE2Q8WUY3 FAM53A-201ENST00000308132 2802 ntAPPRIS P1 TSL 2 BASIC16.4■□□□□ 0.22
PRUNE2Q8WUY3 CCDC51-204ENST00000442740 1554 ntTSL 3 BASIC16.4■□□□□ 0.22
PRUNE2Q8WUY3 PSMD13-215ENST00000621534 1572 ntTSL 5 BASIC16.4■□□□□ 0.22
PRUNE2Q8WUY3 CELA3B-201ENST00000337107 897 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
PRUNE2Q8WUY3 MPV17-205ENST00000402310 906 ntTSL 5 BASIC16.4■□□□□ 0.22
PRUNE2Q8WUY3 AL354877.1-201ENST00000424412 413 ntBASIC16.4■□□□□ 0.22
PRUNE2Q8WUY3 PAQR9-AS1-203ENST00000497652 516 ntTSL 3 BASIC16.4■□□□□ 0.22
PRUNE2Q8WUY3 RPL17P45-201ENST00000586289 509 ntBASIC16.4■□□□□ 0.22
PRUNE2Q8WUY3 NSMF-204ENST00000371473 3556 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
PRUNE2Q8WUY3 EIPR1-202ENST00000398659 1795 ntTSL 5 BASIC16.4■□□□□ 0.22
PRUNE2Q8WUY3 TIGAR-201ENST00000179259 2782 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
PRUNE2Q8WUY3 SLC44A3-209ENST00000532427 1912 ntTSL 2 BASIC16.4■□□□□ 0.22
PRUNE2Q8WUY3 RGMB-207ENST00000513185 2052 ntAPPRIS ALT2 TSL 2 BASIC16.4■□□□□ 0.22
PRUNE2Q8WUY3 VGLL2-202ENST00000352536 1709 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
PRUNE2Q8WUY3 GATD1-203ENST00000397472 790 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
PRUNE2Q8WUY3 AL133267.1-201ENST00000398220 340 ntBASIC16.4■□□□□ 0.22
PRUNE2Q8WUY3 ALG1L13P-202ENST00000519320 584 ntBASIC16.4■□□□□ 0.22
PRUNE2Q8WUY3 RN7SL48P-201ENST00000579283 293 ntBASIC16.4■□□□□ 0.22
PRUNE2Q8WUY3 ULBP2-201ENST00000367351 1349 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
PRUNE2Q8WUY3 LINC02405-201ENST00000512624 1361 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
PRUNE2Q8WUY3 ARFIP2-201ENST00000254584 2543 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
PRUNE2Q8WUY3 LINGO1-204ENST00000561030 2677 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
PRUNE2Q8WUY3 TFEB-203ENST00000358871 2188 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
PRUNE2Q8WUY3 DDX17-211ENST00000640332 2190 ntAPPRIS P3 TSL 1 (best) BASIC16.4■□□□□ 0.22
PRUNE2Q8WUY3 DDX17-212ENST00000640668 2196 ntAPPRIS ALT2 TSL 1 (best) BASIC16.4■□□□□ 0.22
PRUNE2Q8WUY3 TTLL5-219ENST00000556977 1961 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
PRUNE2Q8WUY3 PLEKHF2-201ENST00000315367 2881 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.22
PRUNE2Q8WUY3 IGHV3-13-201ENST00000390602 430 ntAPPRIS P1 BASIC16.39■□□□□ 0.22
PRUNE2Q8WUY3 AL157392.1-201ENST00000412388 373 ntTSL 2 BASIC16.39■□□□□ 0.22
PRUNE2Q8WUY3 AC145207.1-201ENST00000415556 691 ntTSL 4 BASIC16.39■□□□□ 0.22
PRUNE2Q8WUY3 POLR2H-203ENST00000430783 1159 ntTSL 2 BASIC16.39■□□□□ 0.22
PRUNE2Q8WUY3 ELP6-209ENST00000446787 894 ntTSL 3 BASIC16.39■□□□□ 0.22
PRUNE2Q8WUY3 AC069208.1-205ENST00000456299 576 ntTSL 4 BASIC16.39■□□□□ 0.22
PRUNE2Q8WUY3 SCARNA21-201ENST00000517026 139 ntBASIC16.39■□□□□ 0.22
Retrieved 100 of 98,524 protein–RNA pairs in 40.2 ms