Protein–RNA interactions for Protein: Q8TBC4

UBA3, NEDD8-activating enzyme E1 catalytic subunit, humanhuman

Predictions only

Length 463 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBA3Q8TBC4 LRRFIP2-205ENST00000421276 2522 ntTSL 2 BASIC17.03■□□□□ 0.32
UBA3Q8TBC4 FEN1-201ENST00000305885 2296 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
UBA3Q8TBC4 CDKN1A-203ENST00000405375 2267 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
UBA3Q8TBC4 GATA6-201ENST00000269216 3770 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
UBA3Q8TBC4 SESN1-204ENST00000436639 3509 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
UBA3Q8TBC4 ZAP70-201ENST00000264972 2437 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
UBA3Q8TBC4 AC096667.1-201ENST00000640078 3465 ntTSL 5 BASIC17.02■□□□□ 0.32
UBA3Q8TBC4 U73166.1-201ENST00000439898 2625 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
UBA3Q8TBC4 ITGA7-202ENST00000347027 4084 ntAPPRIS ALT2 TSL 5 BASIC17.02■□□□□ 0.32
UBA3Q8TBC4 TGIF1-201ENST00000330513 1980 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
UBA3Q8TBC4 PPP1R15A-201ENST00000200453 2378 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
UBA3Q8TBC4 PRSS50-201ENST00000460241 2960 ntAPPRIS P1 TSL 2 BASIC17.02■□□□□ 0.32
UBA3Q8TBC4 INTS4P1-202ENST00000587624 2985 ntTSL 5 BASIC17.02■□□□□ 0.32
UBA3Q8TBC4 VPS16-203ENST00000380469 2318 ntTSL 2 BASIC17.02■□□□□ 0.32
UBA3Q8TBC4 SLC4A3-204ENST00000373760 4134 ntAPPRIS P1 TSL 5 BASIC17.02■□□□□ 0.32
UBA3Q8TBC4 CD34-202ENST00000356522 2874 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
UBA3Q8TBC4 PBX1-215ENST00000559240 2866 ntTSL 5 BASIC17.02■□□□□ 0.32
UBA3Q8TBC4 ZFAND5-204ENST00000376960 2686 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
UBA3Q8TBC4 ATXN7-213ENST00000538065 6842 ntAPPRIS ALT2 TSL 1 (best) BASIC17.02■□□□□ 0.32
UBA3Q8TBC4 OTUB1-202ENST00000422031 2297 ntAPPRIS ALT1 TSL 5 BASIC17.02■□□□□ 0.32
UBA3Q8TBC4 KRT8-215ENST00000552150 1687 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
UBA3Q8TBC4 PIP5KL1-201ENST00000300432 1104 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
UBA3Q8TBC4 SEMA4B-202ENST00000411539 3807 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
UBA3Q8TBC4 AC018685.2-201ENST00000414065 547 ntTSL 4 BASIC17.02■□□□□ 0.32
UBA3Q8TBC4 CTDSP1-204ENST00000443891 1109 ntTSL 3 BASIC17.02■□□□□ 0.32
UBA3Q8TBC4 NRK-203ENST00000536164 908 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
UBA3Q8TBC4 AC007406.4-201ENST00000539568 765 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
UBA3Q8TBC4 OBP2A-206ENST00000539850 914 ntAPPRIS P1 TSL 5 BASIC17.02■□□□□ 0.32
UBA3Q8TBC4 AC027088.1-201ENST00000557966 1117 ntTSL 2 BASIC17.02■□□□□ 0.32
UBA3Q8TBC4 AC243562.2-201ENST00000561247 970 ntBASIC17.02■□□□□ 0.32
UBA3Q8TBC4 DM1-AS-201ENST00000586251 483 ntTSL 2 BASIC17.02■□□□□ 0.32
UBA3Q8TBC4 COQ4-205ENST00000609948 956 ntTSL 2 BASIC17.02■□□□□ 0.32
UBA3Q8TBC4 AC093512.1-201ENST00000617969 520 ntBASIC17.02■□□□□ 0.32
UBA3Q8TBC4 SRSF12-201ENST00000452027 3599 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
UBA3Q8TBC4 TUBGCP6-204ENST00000439308 6078 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
UBA3Q8TBC4 FEM1C-201ENST00000274457 5816 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
UBA3Q8TBC4 NR4A3-202ENST00000338488 2588 ntTSL 1 (best) BASIC17.02■□□□□ 0.31
UBA3Q8TBC4 IGSF8-202ENST00000368086 2366 ntAPPRIS P2 TSL 1 (best) BASIC17.02■□□□□ 0.31
UBA3Q8TBC4 SPCS2-201ENST00000263672 2708 ntAPPRIS P2 TSL 1 (best) BASIC17.02■□□□□ 0.31
UBA3Q8TBC4 ZNF707-223ENST00000532205 2865 ntAPPRIS P1 TSL 2 BASIC17.02■□□□□ 0.31
UBA3Q8TBC4 AL035456.1-201ENST00000456064 1369 ntBASIC17.02■□□□□ 0.31
UBA3Q8TBC4 WDR45-240ENST00000635003 1376 ntTSL 3 BASIC17.02■□□□□ 0.31
UBA3Q8TBC4 PML-215ENST00000565898 5393 ntAPPRIS ALT2 TSL 1 (best) BASIC17.02■□□□□ 0.31
UBA3Q8TBC4 ZDHHC13-201ENST00000399351 2283 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
UBA3Q8TBC4 LFNG-205ENST00000402506 2268 ntTSL 2 BASIC17.01■□□□□ 0.31
UBA3Q8TBC4 PCDHA3-201ENST00000522353 5260 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
UBA3Q8TBC4 MLEC-201ENST00000228506 6626 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
UBA3Q8TBC4 MPIG6B-204ENST00000375809 2396 ntAPPRIS ALT2 TSL 1 (best) BASIC17.01■□□□□ 0.31
UBA3Q8TBC4 CHAT-205ENST00000395562 2528 ntAPPRIS ALT2 TSL 1 (best) BASIC17.01■□□□□ 0.31
UBA3Q8TBC4 AP001282.1-201ENST00000531301 1499 ntBASIC17.01■□□□□ 0.31
UBA3Q8TBC4 HACD3-206ENST00000565299 1465 ntTSL 5 BASIC17.01■□□□□ 0.31
UBA3Q8TBC4 CLCNKA-203ENST00000439316 1997 ntTSL 2 BASIC17.01■□□□□ 0.31
UBA3Q8TBC4 ARHGEF10-201ENST00000349830 5590 ntAPPRIS P3 TSL 1 (best) BASIC17.01■□□□□ 0.31
UBA3Q8TBC4 SNAPC4-201ENST00000298532 5010 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
UBA3Q8TBC4 TNNC2-201ENST00000372555 710 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
UBA3Q8TBC4 C6orf52-202ENST00000379586 430 ntAPPRIS ALT2 TSL 2 BASIC17.01■□□□□ 0.31
UBA3Q8TBC4 AC004987.2-201ENST00000395959 1148 ntBASIC17.01■□□□□ 0.31
UBA3Q8TBC4 LINC01273-201ENST00000411453 685 ntTSL 2 BASIC17.01■□□□□ 0.31
UBA3Q8TBC4 PABPN1L-201ENST00000411789 873 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
UBA3Q8TBC4 RNF183-202ENST00000416588 849 ntAPPRIS P1 TSL 3 BASIC17.01■□□□□ 0.31
UBA3Q8TBC4 AC107890.1-201ENST00000422478 521 ntBASIC17.01■□□□□ 0.31
UBA3Q8TBC4 CD28-203ENST00000458610 705 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
UBA3Q8TBC4 INS-205ENST00000512523 297 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
UBA3Q8TBC4 SLCO2B1-205ENST00000525650 2121 ntTSL 2 BASIC17.01■□□□□ 0.31
UBA3Q8TBC4 AC015911.4-201ENST00000588022 1070 ntBASIC17.01■□□□□ 0.31
UBA3Q8TBC4 AL589739.1-201ENST00000607720 493 ntBASIC17.01■□□□□ 0.31
UBA3Q8TBC4 KCNMA1-251ENST00000639090 4319 ntAPPRIS ALT2 TSL 5 BASIC17.01■□□□□ 0.31
UBA3Q8TBC4 PEX6-202ENST00000304611 3478 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
UBA3Q8TBC4 PRKCZ-202ENST00000400921 2294 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
UBA3Q8TBC4 PEX5-206ENST00000434354 2253 ntTSL 2 BASIC17.01■□□□□ 0.31
UBA3Q8TBC4 AL365203.3-201ENST00000609742 2057 ntBASIC17.01■□□□□ 0.31
UBA3Q8TBC4 SLITRK4-201ENST00000338017 3357 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
UBA3Q8TBC4 BEND5-201ENST00000371833 1716 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
UBA3Q8TBC4 TRPC3-202ENST00000379645 3548 ntAPPRIS ALT2 TSL 1 (best) BASIC17.01■□□□□ 0.31
UBA3Q8TBC4 UCHL5-206ENST00000367455 5327 ntAPPRIS P3 TSL 1 (best) BASIC17.01■□□□□ 0.31
UBA3Q8TBC4 ACSS1-201ENST00000323482 3680 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
UBA3Q8TBC4 PLCB1-203ENST00000378641 7323 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
UBA3Q8TBC4 ROR2-202ENST00000375715 2993 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
UBA3Q8TBC4 LINC00472-203ENST00000426635 2958 ntTSL 2 BASIC17.01■□□□□ 0.31
UBA3Q8TBC4 PAUPAR-201ENST00000630360 2965 ntBASIC17.01■□□□□ 0.31
UBA3Q8TBC4 ASTN2-202ENST00000313400 4747 ntAPPRIS ALT2 TSL 5 BASIC17.01■□□□□ 0.31
UBA3Q8TBC4 FRA10AC1-201ENST00000359204 3089 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
UBA3Q8TBC4 DLGAP1-220ENST00000581699 2258 ntTSL 2 BASIC17■□□□□ 0.31
UBA3Q8TBC4 GLYCTK-207ENST00000477382 1304 ntTSL 1 (best) BASIC17■□□□□ 0.31
UBA3Q8TBC4 FBLN1-202ENST00000327858 2896 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
UBA3Q8TBC4 TBC1D9B-202ENST00000356834 5173 ntAPPRIS ALT2 TSL 1 (best) BASIC17■□□□□ 0.31
UBA3Q8TBC4 HDAC5-201ENST00000225983 5326 ntAPPRIS P3 TSL 5 BASIC17■□□□□ 0.31
UBA3Q8TBC4 PLPPR5-201ENST00000263177 3288 ntAPPRIS P4 TSL 1 (best) BASIC17■□□□□ 0.31
UBA3Q8TBC4 FAM214B-206ENST00000603301 3256 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
UBA3Q8TBC4 TMEM219-201ENST00000279396 999 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
UBA3Q8TBC4 NBL1-201ENST00000289749 731 ntAPPRIS ALT2 TSL 2 BASIC17■□□□□ 0.31
UBA3Q8TBC4 POLR1C-201ENST00000304004 1280 ntTSL 1 (best) BASIC17■□□□□ 0.31
UBA3Q8TBC4 FKBP2-201ENST00000309366 657 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
UBA3Q8TBC4 SLC26A5-202ENST00000339444 2474 ntTSL 1 (best) BASIC17■□□□□ 0.31
UBA3Q8TBC4 ASMT-201ENST00000381229 1087 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
UBA3Q8TBC4 CSHL1-204ENST00000392824 823 ntAPPRIS ALT1 TSL 1 (best) BASIC17■□□□□ 0.31
UBA3Q8TBC4 BAD-202ENST00000394531 631 ntTSL 3 BASIC17■□□□□ 0.31
UBA3Q8TBC4 TREML5P-201ENST00000421694 576 ntBASIC17■□□□□ 0.31
UBA3Q8TBC4 MUSTN1-201ENST00000446157 721 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
UBA3Q8TBC4 LAMTOR4-206ENST00000473459 720 ntTSL 2 BASIC17■□□□□ 0.31
Retrieved 100 of 98,524 protein–RNA pairs in 36 ms