Protein–RNA interactions for Protein: Q8NFU0

BEST4, Bestrophin-4, humanhuman

Predictions only

Length 473 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BEST4Q8NFU0 SFXN3-202ENST00000393459 3098 ntAPPRIS P1 TSL 5 BASIC13.98□□□□□ -0.17
BEST4Q8NFU0 SUGP2-202ENST00000337018 3640 ntAPPRIS P3 TSL 1 (best) BASIC13.98□□□□□ -0.17
BEST4Q8NFU0 TBRG4-215ENST00000494076 2190 ntAPPRIS P1 TSL 2 BASIC13.98□□□□□ -0.17
BEST4Q8NFU0 KCNG4-202ENST00000568181 2199 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
BEST4Q8NFU0 TCP10-210ENST00000617120 2182 ntAPPRIS ALT2 TSL 5 BASIC13.98□□□□□ -0.17
BEST4Q8NFU0 CFAP53-201ENST00000398545 1851 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
BEST4Q8NFU0 FAM84A-201ENST00000295092 6355 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
BEST4Q8NFU0 TMEM88-201ENST00000301599 875 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
BEST4Q8NFU0 PLAC8-202ENST00000411416 786 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
BEST4Q8NFU0 NAT6-202ENST00000417393 1163 ntAPPRIS ALT2 TSL 1 (best) BASIC13.98□□□□□ -0.17
BEST4Q8NFU0 IGHV3-47-201ENST00000425060 335 ntBASIC13.98□□□□□ -0.17
BEST4Q8NFU0 TSSC2-201ENST00000450217 709 ntBASIC13.98□□□□□ -0.17
BEST4Q8NFU0 POLR2M-203ENST00000464277 910 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
BEST4Q8NFU0 PDZD7-203ENST00000470414 1057 ntTSL 2 BASIC13.98□□□□□ -0.17
BEST4Q8NFU0 EIF5A2-203ENST00000474096 570 ntTSL 4 BASIC13.98□□□□□ -0.17
BEST4Q8NFU0 TMEM258-204ENST00000537328 575 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
BEST4Q8NFU0 MIR22HG-204ENST00000571595 767 ntTSL 5 BASIC13.98□□□□□ -0.17
BEST4Q8NFU0 MCRIP1-206ENST00000573478 1123 ntTSL 2 BASIC13.98□□□□□ -0.17
BEST4Q8NFU0 TNNT1-204ENST00000585321 995 ntAPPRIS ALT2 TSL 5 BASIC13.98□□□□□ -0.17
BEST4Q8NFU0 TMEM114-203ENST00000620492 945 ntAPPRIS P1 TSL 2 BASIC13.98□□□□□ -0.17
BEST4Q8NFU0 C1QTNF8-202ENST00000621771 897 ntTSL 5 BASIC13.98□□□□□ -0.17
BEST4Q8NFU0 UBR5-201ENST00000220959 9418 ntAPPRIS ALT1 TSL 1 (best) BASIC13.98□□□□□ -0.17
BEST4Q8NFU0 PUS1-202ENST00000376649 4094 ntAPPRIS P3 TSL 1 (best) BASIC13.98□□□□□ -0.17
BEST4Q8NFU0 SDR16C5-201ENST00000303749 1840 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
BEST4Q8NFU0 ZNF568-203ENST00000427117 1827 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
BEST4Q8NFU0 ALOX15B-205ENST00000573359 1809 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
BEST4Q8NFU0 AC112229.3-201ENST00000603767 3202 ntAPPRIS P1 TSL 2 BASIC13.98□□□□□ -0.17
BEST4Q8NFU0 AC013271.1-201ENST00000640669 3202 ntAPPRIS P1 TSL 2 BASIC13.98□□□□□ -0.17
BEST4Q8NFU0 LCAT-201ENST00000264005 1507 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
BEST4Q8NFU0 HLA-F-218ENST00000376861 1544 ntAPPRIS ALT2 BASIC13.98□□□□□ -0.17
BEST4Q8NFU0 GOLGA2P2Y-202ENST00000423852 1506 ntBASIC13.98□□□□□ -0.17
BEST4Q8NFU0 PIDD1-202ENST00000411829 2886 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
BEST4Q8NFU0 PDPK1-201ENST00000268673 4728 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
BEST4Q8NFU0 STAT6-225ENST00000640254 2037 ntTSL 5 BASIC13.98□□□□□ -0.17
BEST4Q8NFU0 MYH11-201ENST00000300036 6029 ntAPPRIS P3 TSL 1 (best) BASIC13.98□□□□□ -0.17
BEST4Q8NFU0 CNOT8-201ENST00000285896 2528 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
BEST4Q8NFU0 NWD2-201ENST00000309447 8325 ntAPPRIS P1 TSL 5 BASIC13.98□□□□□ -0.17
BEST4Q8NFU0 KIFC3-207ENST00000543930 3018 ntTSL 2 BASIC13.98□□□□□ -0.17
BEST4Q8NFU0 SPHK2-202ENST00000340932 2492 ntTSL 5 BASIC13.98□□□□□ -0.17
BEST4Q8NFU0 KXD1-201ENST00000222307 1426 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
BEST4Q8NFU0 NCF1C-201ENST00000438382 1427 ntBASIC13.98□□□□□ -0.17
BEST4Q8NFU0 IQCF3-205ENST00000456080 1685 ntAPPRIS P1 TSL 2 BASIC13.98□□□□□ -0.17
BEST4Q8NFU0 PLEKHO2-201ENST00000323544 3720 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
BEST4Q8NFU0 EPHA2-201ENST00000358432 3964 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
BEST4Q8NFU0 BUD13-201ENST00000260210 2196 ntAPPRIS P3 TSL 1 (best) BASIC13.98□□□□□ -0.17
BEST4Q8NFU0 GALNT14-201ENST00000324589 2169 ntTSL 2 BASIC13.98□□□□□ -0.17
BEST4Q8NFU0 PRKRIP1-201ENST00000397912 2159 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
BEST4Q8NFU0 RAB37-206ENST00000392615 2655 ntTSL 3 BASIC13.98□□□□□ -0.17
BEST4Q8NFU0 CUL3-201ENST00000264414 6741 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
BEST4Q8NFU0 CNGA4-201ENST00000379936 1863 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
BEST4Q8NFU0 ARHGAP6-204ENST00000380718 3632 ntAPPRIS ALT2 TSL 1 (best) BASIC13.97□□□□□ -0.17
BEST4Q8NFU0 SPATA7-203ENST00000393545 2123 ntAPPRIS P3 TSL 1 (best) BASIC13.97□□□□□ -0.17
BEST4Q8NFU0 LINC00900-201ENST00000499809 3322 ntTSL 2 BASIC13.97□□□□□ -0.17
BEST4Q8NFU0 LTBP3-221ENST00000532932 3327 ntTSL 2 BASIC13.97□□□□□ -0.17
BEST4Q8NFU0 AC092384.2-204ENST00000565053 2566 ntTSL 2 BASIC13.97□□□□□ -0.17
BEST4Q8NFU0 TIRAP-203ENST00000392680 2068 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
BEST4Q8NFU0 FLOT2-201ENST00000394906 2756 ntTSL 5 BASIC13.97□□□□□ -0.17
BEST4Q8NFU0 PDCL3-201ENST00000264254 1337 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
BEST4Q8NFU0 PITPNM3-201ENST00000262483 7086 ntAPPRIS P3 TSL 1 (best) BASIC13.97□□□□□ -0.17
BEST4Q8NFU0 TNFSF13-202ENST00000349228 2036 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
BEST4Q8NFU0 GOLGA5-201ENST00000163416 2969 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
BEST4Q8NFU0 GTF2IRD1-201ENST00000265755 3430 ntAPPRIS P3 TSL 1 (best) BASIC13.97□□□□□ -0.17
BEST4Q8NFU0 SLC11A2-204ENST00000541174 2470 ntAPPRIS P3 TSL 1 (best) BASIC13.97□□□□□ -0.17
BEST4Q8NFU0 ETV5-206ENST00000434744 2213 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
BEST4Q8NFU0 BRAT1-201ENST00000340611 2915 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
BEST4Q8NFU0 CACNG7-201ENST00000222212 1016 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
BEST4Q8NFU0 GOSR2-201ENST00000225567 1245 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
BEST4Q8NFU0 RBCK1-206ENST00000400247 790 ntTSL 2 BASIC13.97□□□□□ -0.17
BEST4Q8NFU0 TP53TG1-202ENST00000416560 710 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
BEST4Q8NFU0 LINC01972-201ENST00000422271 553 ntTSL 3 BASIC13.97□□□□□ -0.17
BEST4Q8NFU0 AL732437.1-201ENST00000442008 595 ntTSL 4 BASIC13.97□□□□□ -0.17
BEST4Q8NFU0 RBSN-204ENST00000449050 903 ntTSL 2 BASIC13.97□□□□□ -0.17
BEST4Q8NFU0 FAM181A-203ENST00000556222 1162 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
BEST4Q8NFU0 AC010463.1-201ENST00000596542 1207 ntAPPRIS P1 TSL 2 BASIC13.97□□□□□ -0.17
BEST4Q8NFU0 LINC01023-201ENST00000606054 436 ntBASIC13.97□□□□□ -0.17
BEST4Q8NFU0 AL121956.5-201ENST00000625261 221 ntBASIC13.97□□□□□ -0.17
BEST4Q8NFU0 AC066615.1-201ENST00000640911 628 ntBASIC13.97□□□□□ -0.17
BEST4Q8NFU0 FAM49B-224ENST00000522941 1700 ntTSL 5 BASIC13.97□□□□□ -0.17
BEST4Q8NFU0 MBD1-224ENST00000591416 4905 ntAPPRIS P3 TSL 5 BASIC13.97□□□□□ -0.17
BEST4Q8NFU0 ALDH1B1-201ENST00000377698 3066 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
BEST4Q8NFU0 MINDY2-203ENST00000559228 9238 ntAPPRIS P3 TSL 2 BASIC13.97□□□□□ -0.17
BEST4Q8NFU0 AC083864.1-201ENST00000381493 1497 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
BEST4Q8NFU0 PSEN2-203ENST00000422240 1947 ntAPPRIS ALT1 TSL 2 BASIC13.97□□□□□ -0.17
BEST4Q8NFU0 NMUR1-201ENST00000305141 3298 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
BEST4Q8NFU0 TSPAN11-201ENST00000261177 5505 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
BEST4Q8NFU0 COL6A2-201ENST00000300527 3461 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
BEST4Q8NFU0 LINC02212-201ENST00000515243 2130 ntTSL 2 BASIC13.97□□□□□ -0.17
BEST4Q8NFU0 GOLGA2P3Y-201ENST00000416946 1653 ntBASIC13.97□□□□□ -0.17
BEST4Q8NFU0 ERP29-203ENST00000546477 1698 ntTSL 3 BASIC13.97□□□□□ -0.17
BEST4Q8NFU0 CTBP1-AS2-205ENST00000578730 2757 ntTSL 2 BASIC13.97□□□□□ -0.17
BEST4Q8NFU0 SRPX-201ENST00000378533 1874 ntAPPRIS P3 TSL 1 (best) BASIC13.97□□□□□ -0.17
BEST4Q8NFU0 SAE1-202ENST00000392776 1851 ntTSL 3 BASIC13.97□□□□□ -0.17
BEST4Q8NFU0 ARMC5-202ENST00000408912 3626 ntAPPRIS ALT2 TSL 2 BASIC13.97□□□□□ -0.17
BEST4Q8NFU0 KYAT1-205ENST00000436267 2487 ntTSL 2 BASIC13.97□□□□□ -0.17
BEST4Q8NFU0 FRA10AC1-201ENST00000359204 3089 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
BEST4Q8NFU0 TTC29-208ENST00000513335 2226 ntAPPRIS ALT2 TSL 2 BASIC13.96□□□□□ -0.17
BEST4Q8NFU0 EDIL3-201ENST00000296591 4727 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
BEST4Q8NFU0 LINC01700-201ENST00000433952 1598 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
BEST4Q8NFU0 EIPR1-202ENST00000398659 1795 ntTSL 5 BASIC13.96□□□□□ -0.17
BEST4Q8NFU0 CXCL14-202ENST00000512158 1760 ntAPPRIS ALT2 TSL 1 (best) BASIC13.96□□□□□ -0.17
Retrieved 100 of 98,524 protein–RNA pairs in 28 ms