Protein–RNA interactions for Protein: Q8NEP3

DNAAF1, Dynein assembly factor 1, axonemal, humanhuman

Predictions only

Length 725 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DNAAF1Q8NEP3 PLAGL1-208ENST00000437412 2640 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
DNAAF1Q8NEP3 ZNF620-202ENST00000418905 2022 ntTSL 2 BASIC14.24□□□□□ -0.13
DNAAF1Q8NEP3 TUB-AS1-201ENST00000506601 2021 ntTSL 2 BASIC14.24□□□□□ -0.13
DNAAF1Q8NEP3 TDRP-205ENST00000613071 3421 ntAPPRIS P1 TSL 3 BASIC14.24□□□□□ -0.13
DNAAF1Q8NEP3 PRKCZ-202ENST00000400921 2294 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
DNAAF1Q8NEP3 ASS1-204ENST00000372394 1973 ntAPPRIS P1 TSL 2 BASIC14.23□□□□□ -0.13
DNAAF1Q8NEP3 PKP4-AS1-203ENST00000629904 1951 ntTSL 5 BASIC14.23□□□□□ -0.13
DNAAF1Q8NEP3 ACSS2-202ENST00000360596 3065 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
DNAAF1Q8NEP3 EVA1C-202ENST00000382699 1668 ntAPPRIS ALT1 TSL 1 (best) BASIC14.23□□□□□ -0.13
DNAAF1Q8NEP3 COPS8-202ENST00000392008 1654 ntTSL 2 BASIC14.23□□□□□ -0.13
DNAAF1Q8NEP3 SEPT9-211ENST00000585930 1387 ntTSL 2 BASIC14.23□□□□□ -0.13
DNAAF1Q8NEP3 NELFA-203ENST00000411638 2199 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
DNAAF1Q8NEP3 FOXB1-201ENST00000396057 2957 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
DNAAF1Q8NEP3 PUF60-208ENST00000526683 2412 ntAPPRIS P4 TSL 1 (best) BASIC14.23□□□□□ -0.13
DNAAF1Q8NEP3 DDX55-201ENST00000238146 2654 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
DNAAF1Q8NEP3 AC138904.3-201ENST00000635780 2681 ntTSL 5 BASIC14.23□□□□□ -0.13
DNAAF1Q8NEP3 DDB1-201ENST00000301764 4506 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
DNAAF1Q8NEP3 KIAA1468-201ENST00000256858 5579 ntAPPRIS P1 TSL 5 BASIC14.23□□□□□ -0.13
DNAAF1Q8NEP3 FXN-201ENST00000377270 2608 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
DNAAF1Q8NEP3 MFRP-205ENST00000619721 3917 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
DNAAF1Q8NEP3 RNASEH2A-201ENST00000221486 1165 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
DNAAF1Q8NEP3 KRTCAP3-202ENST00000407293 942 ntTSL 2 BASIC14.23□□□□□ -0.13
DNAAF1Q8NEP3 AC018712.1-201ENST00000455767 687 ntBASIC14.23□□□□□ -0.13
DNAAF1Q8NEP3 AF186996.4-201ENST00000467186 377 ntBASIC14.23□□□□□ -0.13
DNAAF1Q8NEP3 MMP17-203ENST00000535004 719 ntTSL 3 BASIC14.23□□□□□ -0.13
DNAAF1Q8NEP3 RAP1B-229ENST00000543393 874 ntTSL 3 BASIC14.23□□□□□ -0.13
DNAAF1Q8NEP3 RPS29-206ENST00000557111 488 ntTSL 2 BASIC14.23□□□□□ -0.13
DNAAF1Q8NEP3 SPINT1-AS1-203ENST00000565315 629 ntTSL 2 BASIC14.23□□□□□ -0.13
DNAAF1Q8NEP3 RPS15-207ENST00000591032 550 ntTSL 3 BASIC14.23□□□□□ -0.13
DNAAF1Q8NEP3 RPS15-212ENST00000593052 629 ntTSL 2 BASIC14.23□□□□□ -0.13
DNAAF1Q8NEP3 AL121912.1-201ENST00000603683 238 ntBASIC14.23□□□□□ -0.13
DNAAF1Q8NEP3 TP73-AS1-207ENST00000624167 988 ntBASIC14.23□□□□□ -0.13
DNAAF1Q8NEP3 CCDC189-204ENST00000541260 1531 ntTSL 5 BASIC14.23□□□□□ -0.13
DNAAF1Q8NEP3 AL592424.1-201ENST00000563624 1536 ntBASIC14.23□□□□□ -0.13
DNAAF1Q8NEP3 KRT8-205ENST00000546897 1755 ntAPPRIS P1 TSL 2 BASIC14.23□□□□□ -0.13
DNAAF1Q8NEP3 SLC9A3P2-201ENST00000447821 2021 ntBASIC14.23□□□□□ -0.13
DNAAF1Q8NEP3 MFN2-203ENST00000444836 4531 ntAPPRIS P1 TSL 2 BASIC14.23□□□□□ -0.13
DNAAF1Q8NEP3 RUSC1-209ENST00000471876 1749 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
DNAAF1Q8NEP3 CYP51A1P2-201ENST00000419457 1499 ntBASIC14.23□□□□□ -0.13
DNAAF1Q8NEP3 STAT5B-201ENST00000293328 5103 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
DNAAF1Q8NEP3 TPO-203ENST00000346956 2923 ntTSL 5 BASIC14.23□□□□□ -0.13
DNAAF1Q8NEP3 KIAA1211-206ENST00000541073 4117 ntAPPRIS ALT2 TSL 1 (best) BASIC14.23□□□□□ -0.13
DNAAF1Q8NEP3 EGFR-206ENST00000454757 5464 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
DNAAF1Q8NEP3 RNF11-201ENST00000242719 3084 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
DNAAF1Q8NEP3 VTN-201ENST00000226218 2149 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
DNAAF1Q8NEP3 DDX1-202ENST00000381341 2817 ntAPPRIS P1 TSL 5 BASIC14.23□□□□□ -0.13
DNAAF1Q8NEP3 RPS6KL1-201ENST00000354625 5195 ntAPPRIS P1 TSL 2 BASIC14.23□□□□□ -0.13
DNAAF1Q8NEP3 C16orf58-211ENST00000570164 2783 ntAPPRIS ALT1 TSL 5 BASIC14.22□□□□□ -0.13
DNAAF1Q8NEP3 ECE1-204ENST00000415912 5099 ntAPPRIS ALT1 TSL 1 (best) BASIC14.22□□□□□ -0.13
DNAAF1Q8NEP3 AC023157.3-201ENST00000619086 2088 ntBASIC14.22□□□□□ -0.13
DNAAF1Q8NEP3 ACP5-203ENST00000433365 1397 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
DNAAF1Q8NEP3 TNN-201ENST00000239462 5008 ntAPPRIS P1 TSL 2 BASIC14.22□□□□□ -0.13
DNAAF1Q8NEP3 ALOX15B-205ENST00000573359 1809 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
DNAAF1Q8NEP3 SNX5-202ENST00000377768 2288 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
DNAAF1Q8NEP3 DNAJC5-201ENST00000360864 5213 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
DNAAF1Q8NEP3 GLB1L2-201ENST00000339772 3152 ntAPPRIS P1 TSL 5 BASIC14.22□□□□□ -0.13
DNAAF1Q8NEP3 TPBG-202ENST00000535040 3392 ntAPPRIS P1 TSL 2 BASIC14.22□□□□□ -0.13
DNAAF1Q8NEP3 SHROOM4-201ENST00000289292 6261 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
DNAAF1Q8NEP3 GRSF1-201ENST00000254799 6666 ntAPPRIS P1 TSL 5 BASIC14.22□□□□□ -0.13
DNAAF1Q8NEP3 GSKIP-205ENST00000555181 2218 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
DNAAF1Q8NEP3 BAIAP2-219ENST00000575245 2229 ntTSL 5 BASIC14.22□□□□□ -0.13
DNAAF1Q8NEP3 CRELD1-206ENST00000452070 1778 ntAPPRIS P1 TSL 2 BASIC14.22□□□□□ -0.13
DNAAF1Q8NEP3 USP25-201ENST00000285679 3973 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
DNAAF1Q8NEP3 FIP1L1-207ENST00000507922 1335 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
DNAAF1Q8NEP3 SDR39U1-206ENST00000553930 1325 ntTSL 5 BASIC14.22□□□□□ -0.13
DNAAF1Q8NEP3 KIF26B-202ENST00000407071 7287 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
DNAAF1Q8NEP3 HPCAL1-208ENST00000622018 1535 ntAPPRIS P1 TSL 5 BASIC14.22□□□□□ -0.13
DNAAF1Q8NEP3 DNAJC2-203ENST00000379263 2167 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
DNAAF1Q8NEP3 LAT2-202ENST00000344995 2363 ntAPPRIS P2 TSL 1 (best) BASIC14.22□□□□□ -0.13
DNAAF1Q8NEP3 GALNT9-202ENST00000397325 1727 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
DNAAF1Q8NEP3 ZNF252P-AS1-201ENST00000527067 3236 ntBASIC14.22□□□□□ -0.13
DNAAF1Q8NEP3 BCL2L11-219ENST00000619294 5132 ntTSL 5 BASIC14.22□□□□□ -0.13
DNAAF1Q8NEP3 KRTAP1-1-201ENST00000306271 903 ntAPPRIS P1 BASIC14.22□□□□□ -0.13
DNAAF1Q8NEP3 C1orf43-204ENST00000368518 1278 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
DNAAF1Q8NEP3 HUS1B-201ENST00000380907 1025 ntAPPRIS P1 BASIC14.22□□□□□ -0.13
DNAAF1Q8NEP3 SLC9A3R1-202ENST00000413388 1285 ntTSL 2 BASIC14.22□□□□□ -0.13
DNAAF1Q8NEP3 ATP6V0CP3-201ENST00000417255 467 ntBASIC14.22□□□□□ -0.13
DNAAF1Q8NEP3 FAM197Y8-203ENST00000450145 560 ntBASIC14.22□□□□□ -0.13
DNAAF1Q8NEP3 IMMP2L-207ENST00000452895 833 ntAPPRIS P1 TSL 5 BASIC14.22□□□□□ -0.13
DNAAF1Q8NEP3 C1orf109-203ENST00000464085 919 ntAPPRIS P1 TSL 2 BASIC14.22□□□□□ -0.13
DNAAF1Q8NEP3 GOLGA7-203ENST00000518270 808 ntAPPRIS P1 TSL 5 BASIC14.22□□□□□ -0.13
DNAAF1Q8NEP3 GSTO1-207ENST00000539281 1052 ntTSL 5 BASIC14.22□□□□□ -0.13
DNAAF1Q8NEP3 CHMP1A-208ENST00000550102 803 ntTSL 5 BASIC14.22□□□□□ -0.13
DNAAF1Q8NEP3 AC068594.1-202ENST00000581657 749 ntTSL 3 BASIC14.22□□□□□ -0.13
DNAAF1Q8NEP3 AC012313.10-201ENST00000623509 926 ntBASIC14.22□□□□□ -0.13
DNAAF1Q8NEP3 MAP2K3-202ENST00000342679 2303 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
DNAAF1Q8NEP3 HSPA1B-201ENST00000375650 2521 ntAPPRIS P1 BASIC14.22□□□□□ -0.13
DNAAF1Q8NEP3 MAP4K1-210ENST00000591517 2700 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
DNAAF1Q8NEP3 FAM160B1-203ENST00000369250 2870 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
DNAAF1Q8NEP3 MN1-201ENST00000302326 7556 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
DNAAF1Q8NEP3 ZFP41-203ENST00000520584 3284 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
DNAAF1Q8NEP3 RIMS3-201ENST00000372683 1408 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
DNAAF1Q8NEP3 FAM151A-201ENST00000302250 2005 ntAPPRIS P2 TSL 1 (best) BASIC14.22□□□□□ -0.13
DNAAF1Q8NEP3 C1QTNF2-201ENST00000393975 2414 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
DNAAF1Q8NEP3 TRPC6-206ENST00000532133 2648 ntTSL 5 BASIC14.22□□□□□ -0.13
DNAAF1Q8NEP3 PPP3CA-207ENST00000512215 4007 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
DNAAF1Q8NEP3 SMAD2-202ENST00000356825 10445 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
DNAAF1Q8NEP3 ANK1-201ENST00000265709 6379 ntAPPRIS ALT2 TSL 1 (best) BASIC14.22□□□□□ -0.13
DNAAF1Q8NEP3 SLC8B1-201ENST00000202831 2975 ntAPPRIS P1 TSL 5 BASIC14.22□□□□□ -0.13
DNAAF1Q8NEP3 SFRP4-201ENST00000436072 2966 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Retrieved 100 of 98,524 protein–RNA pairs in 35.5 ms