Protein–RNA interactions for Protein: Q8NDH2

CCDC168, Coiled-coil domain-containing protein 168, humanhuman

Predictions only

Length 2,452 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC168Q8NDH2 TRABD-202ENST00000380909 2272 ntAPPRIS P3 TSL 5 BASIC13.32□□□□□ -0.28
CCDC168Q8NDH2 UBR3-203ENST00000418381 7951 ntAPPRIS P1 TSL 5 BASIC13.32□□□□□ -0.28
CCDC168Q8NDH2 NRXN1-220ENST00000611589 1857 ntTSL 5 BASIC13.32□□□□□ -0.28
CCDC168Q8NDH2 GPR108-202ENST00000430424 2009 ntAPPRIS ALT2 TSL 5 BASIC13.31□□□□□ -0.28
CCDC168Q8NDH2 KCNV2-201ENST00000382082 2186 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
CCDC168Q8NDH2 DPEP1-203ENST00000421184 1647 ntAPPRIS P1 TSL 5 BASIC13.31□□□□□ -0.28
CCDC168Q8NDH2 RTKN2-203ENST00000395260 2076 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
CCDC168Q8NDH2 FNBP1-202ENST00000420781 5410 ntAPPRIS ALT1 TSL 1 (best) BASIC13.31□□□□□ -0.28
CCDC168Q8NDH2 FAM19A4-201ENST00000295569 2292 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
CCDC168Q8NDH2 FGFR4-202ENST00000393637 2418 ntAPPRIS ALT2 TSL 1 (best) BASIC13.31□□□□□ -0.28
CCDC168Q8NDH2 MOGS-205ENST00000452063 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC13.31□□□□□ -0.28
CCDC168Q8NDH2 OR6D1P-202ENST00000641007 5290 ntBASIC13.31□□□□□ -0.28
CCDC168Q8NDH2 KATNA1-201ENST00000335643 1564 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
CCDC168Q8NDH2 TNNT2-206ENST00000367320 1007 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
CCDC168Q8NDH2 NDUFS2-201ENST00000367993 2042 ntAPPRIS P3 TSL 1 (best) BASIC13.31□□□□□ -0.28
CCDC168Q8NDH2 MPP1-202ENST00000369534 2042 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
CCDC168Q8NDH2 COL5A1-AS1-201ENST00000371813 336 ntTSL 2 BASIC13.31□□□□□ -0.28
CCDC168Q8NDH2 MTUS1-215ENST00000519066 567 ntTSL 4 BASIC13.31□□□□□ -0.28
CCDC168Q8NDH2 FADS1-216ENST00000542506 1725 ntTSL 2 BASIC13.31□□□□□ -0.28
CCDC168Q8NDH2 KSR1-207ENST00000578981 748 ntTSL 4 BASIC13.31□□□□□ -0.28
CCDC168Q8NDH2 SAMD11-212ENST00000617307 2314 ntAPPRIS ALT2 TSL 5 BASIC13.31□□□□□ -0.28
CCDC168Q8NDH2 AL512652.2-201ENST00000625156 1716 ntBASIC13.31□□□□□ -0.28
CCDC168Q8NDH2 U82695.1-201ENST00000635752 1889 ntBASIC13.31□□□□□ -0.28
CCDC168Q8NDH2 ZNF423-206ENST00000563137 4911 ntAPPRIS ALT2 TSL 5 BASIC13.31□□□□□ -0.28
CCDC168Q8NDH2 SYVN1-201ENST00000294256 3048 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
CCDC168Q8NDH2 SMOC2-206ENST00000535039 1875 ntTSL 5 BASIC13.31□□□□□ -0.28
CCDC168Q8NDH2 AC009053.2-201ENST00000563701 2365 ntBASIC13.31□□□□□ -0.28
CCDC168Q8NDH2 OSGIN1-202ENST00000361711 2230 ntAPPRIS P1 TSL 2 BASIC13.31□□□□□ -0.28
CCDC168Q8NDH2 BCAS3-204ENST00000585744 2203 ntAPPRIS ALT2 TSL 5 BASIC13.31□□□□□ -0.28
CCDC168Q8NDH2 POU3F2-201ENST00000328345 4879 ntAPPRIS P1 BASIC13.31□□□□□ -0.28
CCDC168Q8NDH2 PHGDH-208ENST00000641023 2096 ntAPPRIS P1 BASIC13.31□□□□□ -0.28
CCDC168Q8NDH2 DDX31-201ENST00000310532 2408 ntTSL 2 BASIC13.31□□□□□ -0.28
CCDC168Q8NDH2 NRSN1-203ENST00000378478 2408 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
CCDC168Q8NDH2 MBD1-206ENST00000382948 2434 ntAPPRIS P3 TSL 2 BASIC13.31□□□□□ -0.28
CCDC168Q8NDH2 RIMBP3B-201ENST00000620804 6105 ntAPPRIS P1 BASIC13.31□□□□□ -0.28
CCDC168Q8NDH2 ANHX-201ENST00000419717 1765 ntAPPRIS P1 TSL 2 BASIC13.31□□□□□ -0.28
CCDC168Q8NDH2 PSMB6-201ENST00000270586 852 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
CCDC168Q8NDH2 AK1-202ENST00000373156 757 ntAPPRIS P1 TSL 3 BASIC13.31□□□□□ -0.28
CCDC168Q8NDH2 LYPLA2-202ENST00000374502 1072 ntTSL 2 BASIC13.31□□□□□ -0.28
CCDC168Q8NDH2 AC131097.2-203ENST00000401641 507 ntAPPRIS ALT2 TSL 2 BASIC13.31□□□□□ -0.28
CCDC168Q8NDH2 HSPB1P2-201ENST00000448722 546 ntBASIC13.31□□□□□ -0.28
CCDC168Q8NDH2 AC078785.1-203ENST00000467342 573 ntTSL 4 BASIC13.31□□□□□ -0.28
CCDC168Q8NDH2 TMEM91-211ENST00000544232 725 ntTSL 3 BASIC13.31□□□□□ -0.28
CCDC168Q8NDH2 SAXO2-207ENST00000566861 404 ntAPPRIS ALT2 TSL 2 BASIC13.31□□□□□ -0.28
CCDC168Q8NDH2 DMAC2-208ENST00000589970 979 ntTSL 2 BASIC13.31□□□□□ -0.28
CCDC168Q8NDH2 DMAC2-215ENST00000597457 492 ntTSL 5 BASIC13.31□□□□□ -0.28
CCDC168Q8NDH2 PSMB6-205ENST00000614486 871 ntTSL 2 BASIC13.31□□□□□ -0.28
CCDC168Q8NDH2 GSDMD-206ENST00000526406 2496 ntAPPRIS P2 TSL 2 BASIC13.31□□□□□ -0.28
CCDC168Q8NDH2 SEPT2-245ENST00000616972 3446 ntTSL 2 BASIC13.31□□□□□ -0.28
CCDC168Q8NDH2 CCDC183-201ENST00000338005 1671 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
CCDC168Q8NDH2 PHGDH-202ENST00000369409 1882 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
CCDC168Q8NDH2 AL162231.1-201ENST00000421828 1525 ntAPPRIS P2 TSL 1 (best) BASIC13.3□□□□□ -0.28
CCDC168Q8NDH2 DNAJA3-203ENST00000431375 2294 ntTSL 2 BASIC13.3□□□□□ -0.28
CCDC168Q8NDH2 TAX1BP1-201ENST00000265393 2478 ntAPPRIS ALT2 TSL 1 (best) BASIC13.3□□□□□ -0.28
CCDC168Q8NDH2 EIF2B5-201ENST00000273783 2655 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
CCDC168Q8NDH2 ALDH3A1-212ENST00000494157 1572 ntTSL 3 BASIC13.3□□□□□ -0.28
CCDC168Q8NDH2 PHKA2-201ENST00000379942 5559 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
CCDC168Q8NDH2 AP001189.5-201ENST00000637683 1413 ntTSL 5 BASIC13.3□□□□□ -0.28
CCDC168Q8NDH2 HDAC10-222ENST00000626012 2607 ntTSL 5 BASIC13.3□□□□□ -0.28
CCDC168Q8NDH2 VPS29-201ENST00000360579 1091 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
CCDC168Q8NDH2 PKIG-203ENST00000372887 769 ntTSL 3 BASIC13.3□□□□□ -0.28
CCDC168Q8NDH2 FAM177A1-202ENST00000382406 858 ntAPPRIS ALT2 TSL 1 (best) BASIC13.3□□□□□ -0.28
CCDC168Q8NDH2 KRTAP19-9P-201ENST00000421795 191 ntBASIC13.3□□□□□ -0.28
CCDC168Q8NDH2 LINC01006-204ENST00000435354 545 ntTSL 2 BASIC13.3□□□□□ -0.28
CCDC168Q8NDH2 AC093151.3-202ENST00000445073 709 ntTSL 3 BASIC13.3□□□□□ -0.28
CCDC168Q8NDH2 DNAJC27-AS1-207ENST00000451291 488 ntTSL 3 BASIC13.3□□□□□ -0.28
CCDC168Q8NDH2 CLRN2-201ENST00000511148 823 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
CCDC168Q8NDH2 CSTF3-206ENST00000524827 693 ntTSL 3 BASIC13.3□□□□□ -0.28
CCDC168Q8NDH2 TPO-215ENST00000539820 1157 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
CCDC168Q8NDH2 TAPBPL-205ENST00000544021 772 ntTSL 3 BASIC13.3□□□□□ -0.28
CCDC168Q8NDH2 LYSMD2-204ENST00000560491 1026 ntTSL 3 BASIC13.3□□□□□ -0.28
CCDC168Q8NDH2 AL645939.5-201ENST00000606834 243 ntBASIC13.3□□□□□ -0.28
CCDC168Q8NDH2 LINC00094-204ENST00000599836 1689 ntAPPRIS P5 BASIC13.3□□□□□ -0.28
CCDC168Q8NDH2 TLE4-206ENST00000376552 3695 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
CCDC168Q8NDH2 MAP4K2-202ENST00000377350 2931 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
CCDC168Q8NDH2 CMTM3-214ENST00000567572 1934 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
CCDC168Q8NDH2 GLDN-201ENST00000335449 4971 ntAPPRIS P1 TSL 2 BASIC13.3□□□□□ -0.28
CCDC168Q8NDH2 DNAJB2-201ENST00000336576 3176 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
CCDC168Q8NDH2 MIDN-206ENST00000591446 3243 ntAPPRIS P2 TSL 1 (best) BASIC13.3□□□□□ -0.28
CCDC168Q8NDH2 SLC2A4-204ENST00000571308 1768 ntTSL 5 BASIC13.3□□□□□ -0.28
CCDC168Q8NDH2 STX3-201ENST00000337979 3299 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
CCDC168Q8NDH2 NPBWR1-201ENST00000331251 2687 ntAPPRIS P1 BASIC13.3□□□□□ -0.28
CCDC168Q8NDH2 MYEOV-201ENST00000308946 2287 ntAPPRIS P3 TSL 1 (best) BASIC13.3□□□□□ -0.28
CCDC168Q8NDH2 RALY-203ENST00000375114 6430 ntAPPRIS ALT2 TSL 1 (best) BASIC13.3□□□□□ -0.28
CCDC168Q8NDH2 NPR3-204ENST00000434067 2715 ntTSL 5 BASIC13.3□□□□□ -0.28
CCDC168Q8NDH2 ADRA1A-205ENST00000380582 2089 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
CCDC168Q8NDH2 URI1-202ENST00000392271 3444 ntAPPRIS P3 TSL 1 (best) BASIC13.3□□□□□ -0.28
CCDC168Q8NDH2 KRT15-203ENST00000393976 2394 ntAPPRIS P1 TSL 5 BASIC13.3□□□□□ -0.28
CCDC168Q8NDH2 FDFT1-226ENST00000623368 2368 ntTSL 2 BASIC13.3□□□□□ -0.28
CCDC168Q8NDH2 AADAT-208ENST00000515480 2193 ntAPPRIS P3 TSL 1 (best) BASIC13.3□□□□□ -0.28
CCDC168Q8NDH2 C6orf52-201ENST00000259983 619 ntAPPRIS P2 TSL 5 BASIC13.3□□□□□ -0.28
CCDC168Q8NDH2 CCDC12-201ENST00000292314 1017 ntTSL 5 BASIC13.3□□□□□ -0.28
CCDC168Q8NDH2 GNG5-201ENST00000370641 920 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
CCDC168Q8NDH2 AL451065.1-201ENST00000428958 238 ntTSL 5 BASIC13.3□□□□□ -0.28
CCDC168Q8NDH2 CENPM-208ENST00000472374 541 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
CCDC168Q8NDH2 EIF3K-202ENST00000538434 966 ntTSL 2 BASIC13.3□□□□□ -0.28
CCDC168Q8NDH2 AC243829.4-204ENST00000616926 1115 ntTSL 5 BASIC13.3□□□□□ -0.28
CCDC168Q8NDH2 PLEKHB2-211ENST00000628582 1297 ntTSL 2 BASIC13.3□□□□□ -0.28
CCDC168Q8NDH2 PDHB-206ENST00000474765 1503 ntTSL 5 BASIC13.3□□□□□ -0.28
CCDC168Q8NDH2 BSG-204ENST00000545507 1795 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Retrieved 100 of 98,524 protein–RNA pairs in 32.6 ms