Protein–RNA interactions for Protein: Q8N196

SIX5, Homeobox protein SIX5, humanhuman

Predictions only

Length 739 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SIX5Q8N196 DHPS-201ENST00000210060 1363 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
SIX5Q8N196 SNED1-202ENST00000342631 1930 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
SIX5Q8N196 TTC24-201ENST00000368236 2005 ntAPPRIS P1 TSL 5 BASIC16.46■□□□□ 0.23
SIX5Q8N196 AC092850.2-201ENST00000623821 2697 ntBASIC16.46■□□□□ 0.23
SIX5Q8N196 CPSF4-201ENST00000292476 1691 ntAPPRIS P3 TSL 1 (best) BASIC16.46■□□□□ 0.23
SIX5Q8N196 MUTYH-234ENST00000528013 1662 ntTSL 5 BASIC16.46■□□□□ 0.23
SIX5Q8N196 PDE4DIP-230ENST00000530472 1690 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
SIX5Q8N196 TBP-207ENST00000616883 1750 ntAPPRIS ALT2 TSL 5 BASIC16.46■□□□□ 0.22
SIX5Q8N196 FST-202ENST00000396947 2538 ntTSL 5 BASIC16.46■□□□□ 0.22
SIX5Q8N196 TRIM7-201ENST00000274773 2840 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.22
SIX5Q8N196 SUPT20H-203ENST00000360252 2843 ntAPPRIS P3 TSL 1 (best) BASIC16.46■□□□□ 0.22
SIX5Q8N196 TEX264-204ENST00000415259 2290 ntAPPRIS P3 TSL 5 BASIC16.45■□□□□ 0.22
SIX5Q8N196 TRAF3IP1-201ENST00000373327 4279 ntAPPRIS P3 TSL 1 (best) BASIC16.45■□□□□ 0.22
SIX5Q8N196 BBS7-204ENST00000506636 2570 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
SIX5Q8N196 NRG1-202ENST00000356819 5931 ntAPPRIS ALT2 TSL 1 (best) BASIC16.45■□□□□ 0.22
SIX5Q8N196 ANKRD33B-201ENST00000296657 9188 ntAPPRIS P1 TSL 5 BASIC16.45■□□□□ 0.22
SIX5Q8N196 AFTPH-201ENST00000238855 4113 ntAPPRIS ALT1 TSL 5 BASIC16.45■□□□□ 0.22
SIX5Q8N196 TBC1D10A-203ENST00000403362 1833 ntAPPRIS ALT2 TSL 5 BASIC16.45■□□□□ 0.22
SIX5Q8N196 SLC3A2-201ENST00000338663 1904 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
SIX5Q8N196 RNF165-204ENST00000587853 2011 ntTSL 5 BASIC16.45■□□□□ 0.22
SIX5Q8N196 ASB16-AS1-201ENST00000585457 2213 ntTSL 2 BASIC16.45■□□□□ 0.22
SIX5Q8N196 EML3-212ENST00000494176 2901 ntTSL 2 BASIC16.45■□□□□ 0.22
SIX5Q8N196 TFF2-201ENST00000291526 737 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
SIX5Q8N196 NINJ2-201ENST00000305108 1252 ntAPPRIS P3 TSL 1 (best) BASIC16.45■□□□□ 0.22
SIX5Q8N196 ETFB-201ENST00000309244 900 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
SIX5Q8N196 DBNDD2-208ENST00000372723 1118 ntAPPRIS P1 TSL 2 BASIC16.45■□□□□ 0.22
SIX5Q8N196 NUDT1-205ENST00000397048 783 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
SIX5Q8N196 RPL28-203ENST00000428193 573 ntTSL 2 BASIC16.45■□□□□ 0.22
SIX5Q8N196 AL442647.2-201ENST00000429864 857 ntBASIC16.45■□□□□ 0.22
SIX5Q8N196 NME4-207ENST00000450036 985 ntTSL 3 BASIC16.45■□□□□ 0.22
SIX5Q8N196 AC007551.1-201ENST00000457394 519 ntBASIC16.45■□□□□ 0.22
SIX5Q8N196 AC018685.1-201ENST00000457813 368 ntTSL 3 BASIC16.45■□□□□ 0.22
SIX5Q8N196 AC147067.1-201ENST00000466692 579 ntTSL 2 BASIC16.45■□□□□ 0.22
SIX5Q8N196 LINC02279-201ENST00000553435 737 ntTSL 5 BASIC16.45■□□□□ 0.22
SIX5Q8N196 RPL28-207ENST00000558815 616 ntTSL 2 BASIC16.45■□□□□ 0.22
SIX5Q8N196 EMC4-209ENST00000559421 497 ntTSL 2 BASIC16.45■□□□□ 0.22
SIX5Q8N196 IGHV3OR16-13-201ENST00000562905 353 ntAPPRIS P1 BASIC16.45■□□□□ 0.22
SIX5Q8N196 AC005746.1-201ENST00000589244 672 ntTSL 3 BASIC16.45■□□□□ 0.22
SIX5Q8N196 AC003070.2-201ENST00000589730 386 ntTSL 3 BASIC16.45■□□□□ 0.22
SIX5Q8N196 CALM3-212ENST00000599839 1355 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
SIX5Q8N196 ZDHHC8-202ENST00000334554 5046 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
SIX5Q8N196 RFC5-204ENST00000454402 1655 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
SIX5Q8N196 GOLGA7-204ENST00000520817 1984 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
SIX5Q8N196 CLCN2-204ENST00000434054 2897 ntAPPRIS ALT2 TSL 2 BASIC16.45■□□□□ 0.22
SIX5Q8N196 GGA1-203ENST00000343632 3159 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
SIX5Q8N196 FAM129B-201ENST00000373312 3957 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
SIX5Q8N196 COLGALT2-201ENST00000361927 5177 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
SIX5Q8N196 FGF4-201ENST00000168712 3233 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
SIX5Q8N196 ASH2L-212ENST00000545394 2808 ntTSL 2 BASIC16.45■□□□□ 0.22
SIX5Q8N196 HSF2-202ENST00000452194 2643 ntAPPRIS ALT2 TSL 1 (best) BASIC16.45■□□□□ 0.22
SIX5Q8N196 CCDC184-201ENST00000316554 2343 ntAPPRIS P1 BASIC16.45■□□□□ 0.22
SIX5Q8N196 GSKIP-205ENST00000555181 2218 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
SIX5Q8N196 AL096870.2-201ENST00000565988 2108 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
SIX5Q8N196 NCAPH2-205ENST00000420993 2037 ntAPPRIS P3 TSL 1 (best) BASIC16.45■□□□□ 0.22
SIX5Q8N196 GIT2-202ENST00000354574 5387 ntTSL 5 BASIC16.45■□□□□ 0.22
SIX5Q8N196 CDK2-204ENST00000553376 1725 ntTSL 5 BASIC16.45■□□□□ 0.22
SIX5Q8N196 OSTF1-201ENST00000346234 1319 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
SIX5Q8N196 NADSYN1-201ENST00000319023 2773 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
SIX5Q8N196 PIF1-201ENST00000268043 2687 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
SIX5Q8N196 DZIP1-203ENST00000361396 7418 ntAPPRIS ALT2 TSL 1 (best) BASIC16.44■□□□□ 0.22
SIX5Q8N196 CCDC120-206ENST00000603986 2379 ntAPPRIS ALT2 TSL 2 BASIC16.44■□□□□ 0.22
SIX5Q8N196 BCAR1-201ENST00000162330 3221 ntAPPRIS P3 TSL 1 (best) BASIC16.44■□□□□ 0.22
SIX5Q8N196 ZSWIM8-201ENST00000398706 6062 ntTSL 2 BASIC16.44■□□□□ 0.22
SIX5Q8N196 PPP1R3G-201ENST00000405617 4907 ntAPPRIS P1 BASIC16.44■□□□□ 0.22
SIX5Q8N196 FBXO18-201ENST00000362091 3560 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
SIX5Q8N196 ACP2-205ENST00000527256 1499 ntTSL 2 BASIC16.44■□□□□ 0.22
SIX5Q8N196 MBD1-206ENST00000382948 2434 ntAPPRIS P3 TSL 2 BASIC16.44■□□□□ 0.22
SIX5Q8N196 INPP5J-213ENST00000620191 2306 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
SIX5Q8N196 PRG2-202ENST00000525955 1367 ntAPPRIS P3 TSL 2 BASIC16.44■□□□□ 0.22
SIX5Q8N196 OSGIN1-202ENST00000361711 2230 ntAPPRIS P1 TSL 2 BASIC16.44■□□□□ 0.22
SIX5Q8N196 LCE1E-202ENST00000368771 575 ntAPPRIS P2 TSL 3 BASIC16.44■□□□□ 0.22
SIX5Q8N196 RPL13A-201ENST00000391857 1181 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
SIX5Q8N196 FO393414.2-201ENST00000405153 598 ntBASIC16.44■□□□□ 0.22
SIX5Q8N196 PARP8-206ENST00000503665 572 ntTSL 4 BASIC16.44■□□□□ 0.22
SIX5Q8N196 AC005833.2-201ENST00000527518 1249 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
SIX5Q8N196 AP001453.3-201ENST00000545800 853 ntTSL 3 BASIC16.44■□□□□ 0.22
SIX5Q8N196 OCEL1-213ENST00000601529 942 ntTSL 3 BASIC16.44■□□□□ 0.22
SIX5Q8N196 RIC8A-217ENST00000626818 159 ntTSL 5 BASIC16.44■□□□□ 0.22
SIX5Q8N196 AC099795.1-202ENST00000640492 759 ntTSL 5 BASIC16.44■□□□□ 0.22
SIX5Q8N196 OVCH1-AS1-204ENST00000641955 5529 ntBASIC16.44■□□□□ 0.22
SIX5Q8N196 CYP11A1-202ENST00000358632 2001 ntTSL 2 BASIC16.44■□□□□ 0.22
SIX5Q8N196 GAL3ST1-203ENST00000402321 1908 ntAPPRIS P1 TSL 2 BASIC16.44■□□□□ 0.22
SIX5Q8N196 TADA3-201ENST00000301964 2355 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
SIX5Q8N196 MAPKAP1-202ENST00000350766 3256 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
SIX5Q8N196 KLF10-201ENST00000285407 3097 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
SIX5Q8N196 PTHLH-205ENST00000535992 1891 ntAPPRIS P3 TSL 1 (best) BASIC16.44■□□□□ 0.22
SIX5Q8N196 ALDH4A1-201ENST00000290597 2124 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
SIX5Q8N196 TMEM183A-201ENST00000367242 3019 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
SIX5Q8N196 ZNF57-201ENST00000306908 2003 ntAPPRIS P2 TSL 1 (best) BASIC16.43■□□□□ 0.22
SIX5Q8N196 ZNF57-205ENST00000614108 2002 ntAPPRIS ALT2 TSL 5 BASIC16.43■□□□□ 0.22
SIX5Q8N196 AL138688.1-201ENST00000624851 1594 ntBASIC16.43■□□□□ 0.22
SIX5Q8N196 UVSSA-208ENST00000511563 1494 ntAPPRIS ALT2 TSL 2 BASIC16.43■□□□□ 0.22
SIX5Q8N196 FXN-201ENST00000377270 2608 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
SIX5Q8N196 FADS1-216ENST00000542506 1725 ntTSL 2 BASIC16.43■□□□□ 0.22
SIX5Q8N196 CCDC187-205ENST00000638797 10126 ntAPPRIS ALT2 TSL 5 BASIC16.43■□□□□ 0.22
SIX5Q8N196 NPY-201ENST00000242152 585 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
SIX5Q8N196 CSHL1-203ENST00000346606 659 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
SIX5Q8N196 RHCE-205ENST00000349438 1235 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
SIX5Q8N196 APOA1-204ENST00000375323 1088 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
SIX5Q8N196 ZG16B-201ENST00000382280 831 ntAPPRIS P2 TSL 1 (best) BASIC16.43■□□□□ 0.22
Retrieved 100 of 98,524 protein–RNA pairs in 127.4 ms