Protein–RNA interactions for Protein: Q8IX30

SCUBE3, Signal peptide, CUB and EGF-like domain-containing protein 3, humanhuman

Predictions only

Length 993 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCUBE3Q8IX30 RN7SL832P-201ENST00000607781 1756 ntBASIC16.92■□□□□ 0.3
SCUBE3Q8IX30 AL365203.3-201ENST00000609742 2057 ntBASIC16.92■□□□□ 0.3
SCUBE3Q8IX30 CHAT-205ENST00000395562 2528 ntAPPRIS ALT2 TSL 1 (best) BASIC16.92■□□□□ 0.3
SCUBE3Q8IX30 LRRFIP2-205ENST00000421276 2522 ntTSL 2 BASIC16.92■□□□□ 0.3
SCUBE3Q8IX30 ZFAND5-204ENST00000376960 2686 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
SCUBE3Q8IX30 OLIG2-201ENST00000333337 3262 ntAPPRIS P1 BASIC16.92■□□□□ 0.3
SCUBE3Q8IX30 PCDHA1-203ENST00000504120 5263 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
SCUBE3Q8IX30 CTCF-201ENST00000264010 3939 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
SCUBE3Q8IX30 LFNG-205ENST00000402506 2268 ntTSL 2 BASIC16.91■□□□□ 0.3
SCUBE3Q8IX30 OTUB1-202ENST00000422031 2297 ntAPPRIS ALT1 TSL 5 BASIC16.91■□□□□ 0.3
SCUBE3Q8IX30 DLGAP1-220ENST00000581699 2258 ntTSL 2 BASIC16.91■□□□□ 0.3
SCUBE3Q8IX30 MGME1-203ENST00000377710 2336 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
SCUBE3Q8IX30 KMT5A-202ENST00000402868 3140 ntAPPRIS P2 TSL 1 (best) BASIC16.91■□□□□ 0.3
SCUBE3Q8IX30 GRAMD2B-217ENST00000515200 3109 ntTSL 5 BASIC16.91■□□□□ 0.3
SCUBE3Q8IX30 SLC4A3-201ENST00000273063 4246 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
SCUBE3Q8IX30 CLDN19-202ENST00000372539 1586 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
SCUBE3Q8IX30 PPP1R15A-201ENST00000200453 2378 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
SCUBE3Q8IX30 IGSF8-202ENST00000368086 2366 ntAPPRIS P2 TSL 1 (best) BASIC16.91■□□□□ 0.3
SCUBE3Q8IX30 LINC00313-201ENST00000332440 579 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
SCUBE3Q8IX30 TNNC2-201ENST00000372555 710 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
SCUBE3Q8IX30 C6orf52-202ENST00000379586 430 ntAPPRIS ALT2 TSL 2 BASIC16.91■□□□□ 0.3
SCUBE3Q8IX30 C2orf76-202ENST00000409466 1150 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
SCUBE3Q8IX30 CD28-203ENST00000458610 705 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
SCUBE3Q8IX30 ST7-OT4-203ENST00000466018 894 ntTSL 5 BASIC16.91■□□□□ 0.3
SCUBE3Q8IX30 AC125807.1-201ENST00000483097 614 ntBASIC16.91■□□□□ 0.3
SCUBE3Q8IX30 ZNF789-211ENST00000493485 556 ntTSL 4 BASIC16.91■□□□□ 0.3
SCUBE3Q8IX30 SATB1-217ENST00000493952 626 ntTSL 3 BASIC16.91■□□□□ 0.3
SCUBE3Q8IX30 CD34-202ENST00000356522 2874 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
SCUBE3Q8IX30 KDM6A-211ENST00000536777 5633 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
SCUBE3Q8IX30 NR4A3-202ENST00000338488 2588 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
SCUBE3Q8IX30 ZDHHC13-201ENST00000399351 2283 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
SCUBE3Q8IX30 ZNF398-203ENST00000483892 2121 ntTSL 5 BASIC16.91■□□□□ 0.3
SCUBE3Q8IX30 PRAL-201ENST00000624952 3286 ntBASIC16.91■□□□□ 0.3
SCUBE3Q8IX30 ARHGEF40-201ENST00000298694 5919 ntAPPRIS P1 TSL 2 BASIC16.91■□□□□ 0.3
SCUBE3Q8IX30 TGIF1-201ENST00000330513 1980 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
SCUBE3Q8IX30 KRT8-215ENST00000552150 1687 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
SCUBE3Q8IX30 ZNF707-223ENST00000532205 2865 ntAPPRIS P1 TSL 2 BASIC16.91■□□□□ 0.3
SCUBE3Q8IX30 C12orf42-201ENST00000378113 1513 ntAPPRIS P2 TSL 5 BASIC16.91■□□□□ 0.3
SCUBE3Q8IX30 SPCS2-201ENST00000263672 2708 ntAPPRIS P2 TSL 1 (best) BASIC16.9■□□□□ 0.3
SCUBE3Q8IX30 ADSL-220ENST00000636714 1734 ntAPPRIS ALT1 TSL 5 BASIC16.9■□□□□ 0.3
SCUBE3Q8IX30 GIT2-220ENST00000553118 2424 ntTSL 5 BASIC16.9■□□□□ 0.3
SCUBE3Q8IX30 FEN1-201ENST00000305885 2296 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
SCUBE3Q8IX30 PEX5-206ENST00000434354 2253 ntTSL 2 BASIC16.9■□□□□ 0.3
SCUBE3Q8IX30 INTS4P1-202ENST00000587624 2985 ntTSL 5 BASIC16.9■□□□□ 0.3
SCUBE3Q8IX30 FAM184A-214ENST00000621231 4048 ntTSL 5 BASIC16.9■□□□□ 0.3
SCUBE3Q8IX30 FBXL5-201ENST00000341285 3385 ntAPPRIS P3 TSL 1 (best) BASIC16.9■□□□□ 0.3
SCUBE3Q8IX30 DRG2-201ENST00000225729 1964 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
SCUBE3Q8IX30 PIP5KL1-201ENST00000300432 1104 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
SCUBE3Q8IX30 ASMT-201ENST00000381229 1087 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
SCUBE3Q8IX30 LINC01273-201ENST00000411453 685 ntTSL 2 BASIC16.9■□□□□ 0.3
SCUBE3Q8IX30 MUSTN1-201ENST00000446157 721 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
SCUBE3Q8IX30 LAMTOR4-206ENST00000473459 720 ntTSL 2 BASIC16.9■□□□□ 0.3
SCUBE3Q8IX30 AC090142.2-201ENST00000483263 416 ntBASIC16.9■□□□□ 0.3
SCUBE3Q8IX30 INS-205ENST00000512523 297 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
SCUBE3Q8IX30 GREM1-201ENST00000560677 623 ntTSL 4 BASIC16.9■□□□□ 0.3
SCUBE3Q8IX30 NDRG4-247ENST00000568640 1281 ntTSL 2 BASIC16.9■□□□□ 0.3
SCUBE3Q8IX30 LMO7-AS1-202ENST00000568735 467 ntTSL 3 BASIC16.9■□□□□ 0.3
SCUBE3Q8IX30 AC016168.1-201ENST00000591422 722 ntTSL 3 BASIC16.9■□□□□ 0.3
SCUBE3Q8IX30 AC026803.2-201ENST00000599784 819 ntTSL 3 BASIC16.9■□□□□ 0.3
SCUBE3Q8IX30 SELENOH-206ENST00000622257 1291 ntAPPRIS ALT1 TSL 5 BASIC16.9■□□□□ 0.3
SCUBE3Q8IX30 SCART1-206ENST00000640237 4351 ntAPPRIS P1 TSL 5 BASIC16.9■□□□□ 0.3
SCUBE3Q8IX30 MPIG6B-204ENST00000375809 2396 ntAPPRIS ALT2 TSL 1 (best) BASIC16.9■□□□□ 0.3
SCUBE3Q8IX30 HACD3-206ENST00000565299 1465 ntTSL 5 BASIC16.9■□□□□ 0.3
SCUBE3Q8IX30 HSF5-201ENST00000323777 4094 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
SCUBE3Q8IX30 ROR2-202ENST00000375715 2993 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
SCUBE3Q8IX30 U73166.1-201ENST00000439898 2625 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
SCUBE3Q8IX30 ZDHHC19-201ENST00000296326 1306 ntAPPRIS P1 TSL 5 BASIC16.9■□□□□ 0.3
SCUBE3Q8IX30 PUDP-203ENST00000424830 1334 ntTSL 3 BASIC16.9■□□□□ 0.3
SCUBE3Q8IX30 LOH12CR2-201ENST00000381800 1540 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
SCUBE3Q8IX30 ZBTB45P2-201ENST00000452245 1531 ntBASIC16.9■□□□□ 0.3
SCUBE3Q8IX30 TACR2-203ENST00000619173 1713 ntTSL 5 BASIC16.9■□□□□ 0.3
SCUBE3Q8IX30 FRA10AC1-201ENST00000359204 3089 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
SCUBE3Q8IX30 TRIM45-203ENST00000369464 3495 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
SCUBE3Q8IX30 WDR45-240ENST00000635003 1376 ntTSL 3 BASIC16.89■□□□□ 0.3
SCUBE3Q8IX30 BFSP2-201ENST00000302334 1558 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.3
SCUBE3Q8IX30 TRIML1-201ENST00000332517 1797 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.3
SCUBE3Q8IX30 CLCNKA-203ENST00000439316 1997 ntTSL 2 BASIC16.89■□□□□ 0.3
SCUBE3Q8IX30 PAUPAR-201ENST00000630360 2965 ntBASIC16.89■□□□□ 0.3
SCUBE3Q8IX30 SURF4-209ENST00000618229 3200 ntTSL 2 BASIC16.89■□□□□ 0.29
SCUBE3Q8IX30 PPP1R3G-201ENST00000405617 4907 ntAPPRIS P1 BASIC16.89■□□□□ 0.29
SCUBE3Q8IX30 REPS1-208ENST00000450536 4537 ntAPPRIS ALT1 TSL 1 (best) BASIC16.89■□□□□ 0.29
SCUBE3Q8IX30 FOXP3-202ENST00000376199 2274 ntTSL 2 BASIC16.89■□□□□ 0.29
SCUBE3Q8IX30 PRKCZ-202ENST00000400921 2294 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
SCUBE3Q8IX30 SYNM-201ENST00000328642 3960 ntAPPRIS ALT2 TSL 1 (best) BASIC16.89■□□□□ 0.29
SCUBE3Q8IX30 SNX6-202ENST00000396526 3398 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
SCUBE3Q8IX30 LY6G6C-201ENST00000375819 992 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
SCUBE3Q8IX30 TNNT3-204ENST00000381558 1258 ntAPPRIS ALT2 TSL 5 BASIC16.89■□□□□ 0.29
SCUBE3Q8IX30 CSHL1-204ENST00000392824 823 ntAPPRIS ALT1 TSL 1 (best) BASIC16.89■□□□□ 0.29
SCUBE3Q8IX30 AC018685.2-201ENST00000414065 547 ntTSL 4 BASIC16.89■□□□□ 0.29
SCUBE3Q8IX30 AC107890.1-201ENST00000422478 521 ntBASIC16.89■□□□□ 0.29
SCUBE3Q8IX30 BCRP1-201ENST00000444246 691 ntBASIC16.89■□□□□ 0.29
SCUBE3Q8IX30 ITGA9-AS1-209ENST00000450990 562 ntTSL 4 BASIC16.89■□□□□ 0.29
SCUBE3Q8IX30 PRSS50-201ENST00000460241 2960 ntAPPRIS P1 TSL 2 BASIC16.89■□□□□ 0.29
SCUBE3Q8IX30 GFM1-208ENST00000478576 2147 ntTSL 2 BASIC16.89■□□□□ 0.29
SCUBE3Q8IX30 AC067863.1-201ENST00000494933 530 ntBASIC16.89■□□□□ 0.29
SCUBE3Q8IX30 AC140878.1-201ENST00000565277 250 ntBASIC16.89■□□□□ 0.29
SCUBE3Q8IX30 FSTL3-202ENST00000588773 746 ntTSL 2 BASIC16.89■□□□□ 0.29
SCUBE3Q8IX30 AL589739.1-201ENST00000607720 493 ntBASIC16.89■□□□□ 0.29
SCUBE3Q8IX30 AC093512.1-201ENST00000617969 520 ntBASIC16.89■□□□□ 0.29
SCUBE3Q8IX30 AQP12B-206ENST00000621682 1080 ntAPPRIS ALT2 TSL 5 BASIC16.89■□□□□ 0.29
Retrieved 100 of 98,524 protein–RNA pairs in 56.6 ms