Protein–RNA interactions for Protein: Q8IUM7

NPAS4, Neuronal PAS domain-containing protein 4, humanhuman

Predictions only

Length 802 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPAS4Q8IUM7 SHC3-202ENST00000375835 9768 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
NPAS4Q8IUM7 GLDN-201ENST00000335449 4971 ntAPPRIS P1 TSL 2 BASIC17.08■□□□□ 0.33
NPAS4Q8IUM7 JADE3-204ENST00000614628 4934 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
NPAS4Q8IUM7 KLHDC7B-201ENST00000395676 2991 ntAPPRIS P1 BASIC17.08■□□□□ 0.33
NPAS4Q8IUM7 CCDC142-201ENST00000290418 2835 ntAPPRIS P2 TSL 2 BASIC17.08■□□□□ 0.33
NPAS4Q8IUM7 NYX-201ENST00000342595 2713 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
NPAS4Q8IUM7 AC005052.1-201ENST00000625181 2492 ntBASIC17.08■□□□□ 0.33
NPAS4Q8IUM7 SEPHS1-202ENST00000378614 2387 ntTSL 1 (best) BASIC17.08■□□□□ 0.33
NPAS4Q8IUM7 BANP-223ENST00000538234 2372 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
NPAS4Q8IUM7 TXNRD2-214ENST00000491939 2238 ntTSL 1 (best) BASIC17.08■□□□□ 0.33
NPAS4Q8IUM7 ACOXL-201ENST00000340561 2188 ntTSL 1 (best) BASIC17.08■□□□□ 0.33
NPAS4Q8IUM7 MCF2L-203ENST00000375604 6445 ntAPPRIS P3 TSL 2 BASIC17.08■□□□□ 0.33
NPAS4Q8IUM7 AC134407.2-201ENST00000625089 1978 ntBASIC17.08■□□□□ 0.33
NPAS4Q8IUM7 PTHLH-201ENST00000201015 1872 ntAPPRIS P3 TSL 3 BASIC17.08■□□□□ 0.33
NPAS4Q8IUM7 VILL-207ENST00000465644 1857 ntTSL 5 BASIC17.08■□□□□ 0.33
NPAS4Q8IUM7 CAMK2G-205ENST00000372765 1822 ntTSL 5 BASIC17.08■□□□□ 0.33
NPAS4Q8IUM7 ACSM2A-203ENST00000417235 1835 ntTSL 2 BASIC17.08■□□□□ 0.33
NPAS4Q8IUM7 OGDH-204ENST00000443864 1744 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
NPAS4Q8IUM7 MPPE1-201ENST00000309976 1636 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
NPAS4Q8IUM7 PPP1R3E-201ENST00000452015 4773 ntAPPRIS P1 TSL 2 BASIC17.08■□□□□ 0.32
NPAS4Q8IUM7 DDX55-203ENST00000421670 1574 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
NPAS4Q8IUM7 AC021148.1-201ENST00000513652 1532 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
NPAS4Q8IUM7 CCL25-201ENST00000253451 953 ntAPPRIS ALT2 TSL 2 BASIC17.08■□□□□ 0.32
NPAS4Q8IUM7 CARTPT-201ENST00000296777 915 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
NPAS4Q8IUM7 EDN2-201ENST00000372587 1241 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
NPAS4Q8IUM7 AC092933.1-201ENST00000393644 945 ntBASIC17.08■□□□□ 0.32
NPAS4Q8IUM7 ATP5D-202ENST00000395633 704 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
NPAS4Q8IUM7 BAATP1-201ENST00000412284 1225 ntBASIC17.08■□□□□ 0.32
NPAS4Q8IUM7 AC243836.1-201ENST00000416696 438 ntTSL 3 BASIC17.08■□□□□ 0.32
NPAS4Q8IUM7 FAM21FP-201ENST00000426241 1131 ntBASIC17.08■□□□□ 0.32
NPAS4Q8IUM7 GEMIN4-202ENST00000437269 1182 ntTSL 2 BASIC17.08■□□□□ 0.32
NPAS4Q8IUM7 AC007551.1-201ENST00000457394 519 ntBASIC17.08■□□□□ 0.32
NPAS4Q8IUM7 AC025183.2-201ENST00000503386 428 ntTSL 3 BASIC17.08■□□□□ 0.32
NPAS4Q8IUM7 RMDN1-212ENST00000519966 1164 ntTSL 2 BASIC17.08■□□□□ 0.32
NPAS4Q8IUM7 AC000032.1-201ENST00000562538 491 ntTSL 2 BASIC17.08■□□□□ 0.32
NPAS4Q8IUM7 CX3CL1-203ENST00000564948 563 ntTSL 3 BASIC17.08■□□□□ 0.32
NPAS4Q8IUM7 AP001063.1-201ENST00000568332 529 ntBASIC17.08■□□□□ 0.32
NPAS4Q8IUM7 TUBB6-213ENST00000591909 1017 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
NPAS4Q8IUM7 AC000095.1-201ENST00000603208 874 ntBASIC17.08■□□□□ 0.32
NPAS4Q8IUM7 KDSR-202ENST00000406396 5447 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
NPAS4Q8IUM7 FAM213B-201ENST00000378424 2765 ntAPPRIS ALT2 TSL 5 BASIC17.08■□□□□ 0.32
NPAS4Q8IUM7 BLOC1S5-202ENST00000397457 2684 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
NPAS4Q8IUM7 WDR90-215ENST00000549091 5589 ntAPPRIS ALT2 TSL 5 BASIC17.08■□□□□ 0.32
NPAS4Q8IUM7 EIF2AK4-201ENST00000263791 5499 ntAPPRIS P1 TSL 2 BASIC17.08■□□□□ 0.32
NPAS4Q8IUM7 TP73-204ENST00000378280 2062 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
NPAS4Q8IUM7 ME2P1-201ENST00000426028 1970 ntBASIC17.08■□□□□ 0.32
NPAS4Q8IUM7 ENC1-207ENST00000618628 5657 ntAPPRIS P1 TSL 5 BASIC17.07■□□□□ 0.32
NPAS4Q8IUM7 GAPDH-201ENST00000229239 1875 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
NPAS4Q8IUM7 CD300A-202ENST00000360141 1858 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
NPAS4Q8IUM7 UCKL1-201ENST00000354216 1837 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
NPAS4Q8IUM7 AL034550.2-201ENST00000620523 1771 ntTSL 2 BASIC17.07■□□□□ 0.32
NPAS4Q8IUM7 LIN54-204ENST00000505397 2742 ntAPPRIS P1 TSL 5 BASIC17.07■□□□□ 0.32
NPAS4Q8IUM7 MIER1-209ENST00000401042 1648 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
NPAS4Q8IUM7 SPTBN4-212ENST00000598249 8070 ntAPPRIS P2 TSL 1 (best) BASIC17.07■□□□□ 0.32
NPAS4Q8IUM7 DTX2-206ENST00000430490 2623 ntAPPRIS P3 TSL 1 (best) BASIC17.07■□□□□ 0.32
NPAS4Q8IUM7 PAQR6-214ENST00000613336 1599 ntTSL 3 BASIC17.07■□□□□ 0.32
NPAS4Q8IUM7 APOBEC3A-202ENST00000402255 1478 ntAPPRIS P1 TSL 5 BASIC17.07■□□□□ 0.32
NPAS4Q8IUM7 HR-202ENST00000381418 6336 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
NPAS4Q8IUM7 MOB3A-201ENST00000357066 3391 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
NPAS4Q8IUM7 AL158154.2-201ENST00000585776 2208 ntTSL 2 BASIC17.07■□□□□ 0.32
NPAS4Q8IUM7 GOLGA2-213ENST00000610329 2212 ntTSL 2 BASIC17.07■□□□□ 0.32
NPAS4Q8IUM7 PRPF19-201ENST00000227524 2157 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
NPAS4Q8IUM7 AC018467.1-201ENST00000421581 717 ntTSL 5 BASIC17.07■□□□□ 0.32
NPAS4Q8IUM7 TMEM147-AS1-201ENST00000444728 487 ntTSL 3 BASIC17.07■□□□□ 0.32
NPAS4Q8IUM7 AC012441.1-201ENST00000446669 685 ntBASIC17.07■□□□□ 0.32
NPAS4Q8IUM7 AC113608.2-201ENST00000448379 487 ntTSL 3 BASIC17.07■□□□□ 0.32
NPAS4Q8IUM7 AL157834.2-201ENST00000451737 663 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
NPAS4Q8IUM7 GUSBP2-202ENST00000479900 1203 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
NPAS4Q8IUM7 HOXC-AS3-201ENST00000509870 544 ntTSL 4 BASIC17.07■□□□□ 0.32
NPAS4Q8IUM7 AL118558.1-202ENST00000557242 451 ntTSL 3 BASIC17.07■□□□□ 0.32
NPAS4Q8IUM7 AC120498.3-201ENST00000568884 542 ntTSL 4 BASIC17.07■□□□□ 0.32
NPAS4Q8IUM7 ANXA2R-202ENST00000616064 1265 ntAPPRIS P1 BASIC17.07■□□□□ 0.32
NPAS4Q8IUM7 MIR6869-201ENST00000619434 62 ntBASIC17.07■□□□□ 0.32
NPAS4Q8IUM7 ABLIM2-203ENST00000361737 3396 ntAPPRIS ALT2 TSL 2 BASIC17.07■□□□□ 0.32
NPAS4Q8IUM7 MREG-205ENST00000620139 2618 ntAPPRIS P1 TSL 2 BASIC17.07■□□□□ 0.32
NPAS4Q8IUM7 PPP2R2B-206ENST00000453001 2569 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
NPAS4Q8IUM7 AGBL5-202ENST00000360131 3177 ntAPPRIS P3 TSL 1 (best) BASIC17.07■□□□□ 0.32
NPAS4Q8IUM7 IL1RN-202ENST00000354115 1747 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
NPAS4Q8IUM7 RTN4-204ENST00000357732 2390 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
NPAS4Q8IUM7 TMEM183A-201ENST00000367242 3019 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
NPAS4Q8IUM7 NEK3-206ENST00000611833 2345 ntAPPRIS ALT2 TSL 5 BASIC17.07■□□□□ 0.32
NPAS4Q8IUM7 EIF2B4-205ENST00000445933 1608 ntAPPRIS ALT1 TSL 1 (best) BASIC17.07■□□□□ 0.32
NPAS4Q8IUM7 SEMA3B-204ENST00000433753 2755 ntAPPRIS ALT1 TSL 1 (best) BASIC17.06■□□□□ 0.32
NPAS4Q8IUM7 LINC02370-201ENST00000428272 2009 ntTSL 5 BASIC17.06■□□□□ 0.32
NPAS4Q8IUM7 BRPF1-201ENST00000383829 4736 ntAPPRIS ALT1 TSL 1 (best) BASIC17.06■□□□□ 0.32
NPAS4Q8IUM7 WNT2-201ENST00000265441 2907 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
NPAS4Q8IUM7 SUZ12-201ENST00000322652 4491 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
NPAS4Q8IUM7 OR6D1P-203ENST00000641209 4860 ntBASIC17.06■□□□□ 0.32
NPAS4Q8IUM7 SS18L1-202ENST00000370848 1238 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
NPAS4Q8IUM7 NDUFC1-203ENST00000394228 761 ntAPPRIS P1 TSL 2 BASIC17.06■□□□□ 0.32
NPAS4Q8IUM7 ROPN1-202ENST00000405845 1007 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
NPAS4Q8IUM7 AC072022.1-201ENST00000450760 1144 ntAPPRIS P1 TSL 3 BASIC17.06■□□□□ 0.32
NPAS4Q8IUM7 HYAL1-208ENST00000457214 1084 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
NPAS4Q8IUM7 KRT18P43-201ENST00000469825 1281 ntBASIC17.06■□□□□ 0.32
NPAS4Q8IUM7 STAG3L5P-205ENST00000473757 1255 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
NPAS4Q8IUM7 DSCR3-207ENST00000476950 937 ntTSL 2 BASIC17.06■□□□□ 0.32
NPAS4Q8IUM7 AC106786.2-201ENST00000506859 561 ntTSL 4 BASIC17.06■□□□□ 0.32
NPAS4Q8IUM7 CEP57L1-208ENST00000519095 908 ntTSL 3 BASIC17.06■□□□□ 0.32
NPAS4Q8IUM7 AC116456.1-201ENST00000526646 815 ntTSL 3 BASIC17.06■□□□□ 0.32
NPAS4Q8IUM7 AP001453.3-201ENST00000545800 853 ntTSL 3 BASIC17.06■□□□□ 0.32
Retrieved 100 of 98,524 protein–RNA pairs in 30.3 ms