Protein–RNA interactions for Protein: Q86WV1

SKAP1, Src kinase-associated phosphoprotein 1, humanhuman

Predictions only

Length 359 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SKAP1Q86WV1 WDR1-203ENST00000382452 3142 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
SKAP1Q86WV1 SEPT9-244ENST00000592420 2588 ntTSL 2 BASIC20.07■□□□□ 0.8
SKAP1Q86WV1 PDIA4-201ENST00000286091 2903 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
SKAP1Q86WV1 COMMD5-202ENST00000402718 1305 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
SKAP1Q86WV1 NOP14-201ENST00000314262 2889 ntAPPRIS P3 TSL 1 (best) BASIC20.07■□□□□ 0.8
SKAP1Q86WV1 PPHLN1-201ENST00000256678 1820 ntTSL 2 BASIC20.07■□□□□ 0.8
SKAP1Q86WV1 PLEKHA8P1-201ENST00000256692 1839 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
SKAP1Q86WV1 ROBO3-201ENST00000397801 4569 ntAPPRIS P2 TSL 1 (best) BASIC20.07■□□□□ 0.8
SKAP1Q86WV1 ROBO3-220ENST00000538940 4551 ntAPPRIS ALT2 TSL 5 BASIC20.07■□□□□ 0.8
SKAP1Q86WV1 TUBB3-206ENST00000554444 1978 ntTSL 2 BASIC20.07■□□□□ 0.8
SKAP1Q86WV1 KLHDC2-206ENST00000554589 1641 ntTSL 5 BASIC20.07■□□□□ 0.8
SKAP1Q86WV1 BIRC2-214ENST00000621637 3331 ntTSL 5 BASIC20.07■□□□□ 0.8
SKAP1Q86WV1 NDUFB9-201ENST00000276689 711 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
SKAP1Q86WV1 ANO1-201ENST00000316296 2118 ntTSL 2 BASIC20.07■□□□□ 0.8
SKAP1Q86WV1 BRCC3-202ENST00000340647 1101 ntAPPRIS P2 TSL 2 BASIC20.07■□□□□ 0.8
SKAP1Q86WV1 WWOX-201ENST00000355860 710 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
SKAP1Q86WV1 FNDC11-202ENST00000370098 1112 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
SKAP1Q86WV1 MCFD2-203ENST00000409147 671 ntTSL 2 BASIC20.07■□□□□ 0.8
SKAP1Q86WV1 RHOQP3-201ENST00000437982 621 ntBASIC20.07■□□□□ 0.8
SKAP1Q86WV1 AC025674.2-201ENST00000522622 2971 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
SKAP1Q86WV1 GPHA2-202ENST00000532246 466 ntTSL 3 BASIC20.07■□□□□ 0.8
SKAP1Q86WV1 AL645728.2-201ENST00000641974 660 ntBASIC20.07■□□□□ 0.8
SKAP1Q86WV1 ASAH1-240ENST00000636997 1774 ntTSL 5 BASIC20.07■□□□□ 0.8
SKAP1Q86WV1 AC025580.3-201ENST00000617932 1424 ntBASIC20.07■□□□□ 0.8
SKAP1Q86WV1 ADCY6-202ENST00000357869 5748 ntTSL 2 BASIC20.07■□□□□ 0.8
SKAP1Q86WV1 SCAP-206ENST00000428413 3749 ntTSL 5 BASIC20.07■□□□□ 0.8
SKAP1Q86WV1 PXN-221ENST00000637617 3246 ntAPPRIS ALT2 TSL 5 BASIC20.07■□□□□ 0.8
SKAP1Q86WV1 MAP2K7-201ENST00000397979 3361 ntAPPRIS P3 TSL 1 (best) BASIC20.07■□□□□ 0.8
SKAP1Q86WV1 TACR2-203ENST00000619173 1713 ntTSL 5 BASIC20.07■□□□□ 0.8
SKAP1Q86WV1 TMEM139-201ENST00000359333 2383 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
SKAP1Q86WV1 DBR1-201ENST00000260803 2666 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
SKAP1Q86WV1 CABP1-201ENST00000288616 1369 ntAPPRIS P4 TSL 1 (best) BASIC20.07■□□□□ 0.8
SKAP1Q86WV1 STK40-204ENST00000373132 3621 ntAPPRIS P3 TSL 1 (best) BASIC20.07■□□□□ 0.8
SKAP1Q86WV1 DFNA5-202ENST00000409775 1689 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
SKAP1Q86WV1 CFLAR-214ENST00000443227 1679 ntTSL 2 BASIC20.07■□□□□ 0.8
SKAP1Q86WV1 COL4A2-201ENST00000360467 6281 ntAPPRIS P1 TSL 5 BASIC20.06■□□□□ 0.8
SKAP1Q86WV1 LINC00391-201ENST00000433569 1844 ntTSL 5 BASIC20.06■□□□□ 0.8
SKAP1Q86WV1 GPR137C-201ENST00000321662 3888 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
SKAP1Q86WV1 TMA16-201ENST00000358572 1978 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
SKAP1Q86WV1 SLC6A13-203ENST00000445055 1950 ntTSL 2 BASIC20.06■□□□□ 0.8
SKAP1Q86WV1 XRCC1-202ENST00000543982 1994 ntTSL 2 BASIC20.06■□□□□ 0.8
SKAP1Q86WV1 POLL-217ENST00000628479 1953 ntTSL 5 BASIC20.06■□□□□ 0.8
SKAP1Q86WV1 AL928654.2-201ENST00000551271 2279 ntTSL 3 BASIC20.06■□□□□ 0.8
SKAP1Q86WV1 ARHGAP23-221ENST00000620417 3663 ntAPPRIS ALT2 TSL 5 BASIC20.06■□□□□ 0.8
SKAP1Q86WV1 SNX14-202ENST00000346348 3348 ntAPPRIS ALT2 TSL 1 (best) BASIC20.06■□□□□ 0.8
SKAP1Q86WV1 PEPD-202ENST00000397032 1754 ntTSL 2 BASIC20.06■□□□□ 0.8
SKAP1Q86WV1 EIF2B3-210ENST00000620860 1923 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
SKAP1Q86WV1 CNOT10-201ENST00000328834 2815 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
SKAP1Q86WV1 LAMTOR5-201ENST00000256644 868 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
SKAP1Q86WV1 SULT1C4-201ENST00000272452 1860 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
SKAP1Q86WV1 OLFM1-207ENST00000371801 568 ntTSL 2 BASIC20.06■□□□□ 0.8
SKAP1Q86WV1 CAMK2B-208ENST00000395747 1557 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
SKAP1Q86WV1 WWOX-204ENST00000408984 1227 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
SKAP1Q86WV1 AC009078.2-202ENST00000463353 338 ntBASIC20.06■□□□□ 0.8
SKAP1Q86WV1 LAMTOR5-204ENST00000483260 694 ntTSL 2 BASIC20.06■□□□□ 0.8
SKAP1Q86WV1 TSPAN4-214ENST00000525201 834 ntTSL 5 BASIC20.06■□□□□ 0.8
SKAP1Q86WV1 MIR3909-201ENST00000579518 119 ntBASIC20.06■□□□□ 0.8
SKAP1Q86WV1 AC008738.3-201ENST00000589932 659 ntTSL 2 BASIC20.06■□□□□ 0.8
SKAP1Q86WV1 LAMTOR5-206ENST00000602318 634 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
SKAP1Q86WV1 AQP6-205ENST00000618286 829 ntTSL 5 BASIC20.06■□□□□ 0.8
SKAP1Q86WV1 SLC26A1-205ENST00000622731 1057 ntTSL 5 BASIC20.06■□□□□ 0.8
SKAP1Q86WV1 ATP6AP2-226ENST00000637526 1862 ntAPPRIS ALT2 TSL 5 BASIC20.06■□□□□ 0.8
SKAP1Q86WV1 LINC00552-201ENST00000625151 2579 ntBASIC20.06■□□□□ 0.8
SKAP1Q86WV1 CHRNG-202ENST00000389494 2262 ntAPPRIS P1 TSL 5 BASIC20.06■□□□□ 0.8
SKAP1Q86WV1 NTRK2-207ENST00000376214 5608 ntAPPRIS P3 TSL 5 BASIC20.06■□□□□ 0.8
SKAP1Q86WV1 HEATR3-201ENST00000299192 3560 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
SKAP1Q86WV1 ACSL4-201ENST00000340800 5333 ntAPPRIS P4 TSL 5 BASIC20.06■□□□□ 0.8
SKAP1Q86WV1 SATB2-202ENST00000417098 5730 ntAPPRIS P1 TSL 2 BASIC20.06■□□□□ 0.8
SKAP1Q86WV1 FAM228B-210ENST00000615575 1357 ntAPPRIS P3 TSL 5 BASIC20.06■□□□□ 0.8
SKAP1Q86WV1 TMEM117-201ENST00000266534 2758 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
SKAP1Q86WV1 EXOG-201ENST00000287675 2792 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
SKAP1Q86WV1 ERG28-201ENST00000256319 2633 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
SKAP1Q86WV1 HGNC:24955-201ENST00000303177 2452 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
SKAP1Q86WV1 PRR19-204ENST00000598490 1641 ntAPPRIS ALT2 TSL 1 (best) BASIC20.05■□□□□ 0.8
SKAP1Q86WV1 RSPO1-204ENST00000615459 2331 ntTSL 2 BASIC20.05■□□□□ 0.8
SKAP1Q86WV1 VWA7-201ENST00000375688 2881 ntAPPRIS P1 TSL 5 BASIC20.05■□□□□ 0.8
SKAP1Q86WV1 TSPAN4-208ENST00000409531 1339 ntTSL 5 BASIC20.05■□□□□ 0.8
SKAP1Q86WV1 SALL3-205ENST00000575389 3996 ntTSL 5 BASIC20.05■□□□□ 0.8
SKAP1Q86WV1 DHRS7-212ENST00000611054 1321 ntTSL 5 BASIC20.05■□□□□ 0.8
SKAP1Q86WV1 ATG4B-206ENST00000405546 3294 ntTSL 2 BASIC20.05■□□□□ 0.8
SKAP1Q86WV1 KIAA1191-201ENST00000298569 2991 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
SKAP1Q86WV1 FAM219A-204ENST00000379081 3543 ntTSL 5 BASIC20.05■□□□□ 0.8
SKAP1Q86WV1 LIMS2-217ENST00000545738 1730 ntTSL 5 BASIC20.05■□□□□ 0.8
SKAP1Q86WV1 ACOX3-203ENST00000503233 2253 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
SKAP1Q86WV1 RPH3AL-201ENST00000323434 2809 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
SKAP1Q86WV1 RPN1-207ENST00000497289 2137 ntTSL 2 BASIC20.05■□□□□ 0.8
SKAP1Q86WV1 EEPD1-205ENST00000534978 2769 ntAPPRIS P1 TSL 2 BASIC20.05■□□□□ 0.8
SKAP1Q86WV1 LIM2-201ENST00000221973 983 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
SKAP1Q86WV1 TMEM150B-201ENST00000326652 943 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
SKAP1Q86WV1 ZAR1L-201ENST00000345108 1103 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
SKAP1Q86WV1 ELOB-202ENST00000409477 997 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
SKAP1Q86WV1 UBE2E1-AS1-201ENST00000426702 778 ntTSL 3 BASIC20.05■□□□□ 0.8
SKAP1Q86WV1 HS6ST1P1-201ENST00000481504 1234 ntBASIC20.05■□□□□ 0.8
SKAP1Q86WV1 CFL1-202ENST00000524553 860 ntTSL 2 BASIC20.05■□□□□ 0.8
SKAP1Q86WV1 AC023355.1-201ENST00000560323 752 ntTSL 3 BASIC20.05■□□□□ 0.8
SKAP1Q86WV1 LITAF-211ENST00000572255 516 ntTSL 4 BASIC20.05■□□□□ 0.8
SKAP1Q86WV1 LITAF-215ENST00000574763 717 ntAPPRIS P1 TSL 3 BASIC20.05■□□□□ 0.8
SKAP1Q86WV1 PRKN-208ENST00000610470 531 ntTSL 2 BASIC20.05■□□□□ 0.8
SKAP1Q86WV1 PRKN-209ENST00000612485 225 ntTSL 5 BASIC20.05■□□□□ 0.8
SKAP1Q86WV1 AL773604.1-201ENST00000617417 272 ntBASIC20.05■□□□□ 0.8
Retrieved 100 of 98,524 protein–RNA pairs in 37.5 ms