Protein–RNA interactions for Protein: Q7Z401

DENND4A, C-myc promoter-binding protein, humanhuman

Predictions only

Length 1,863 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DENND4AQ7Z401 SLC29A1-203ENST00000371724 2275 ntAPPRIS P1 TSL 5 BASIC16.23■□□□□ 0.19
DENND4AQ7Z401 INPP5J-207ENST00000405300 2515 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
DENND4AQ7Z401 PDCD7-201ENST00000204549 2851 ntAPPRIS P2 TSL 1 (best) BASIC16.23■□□□□ 0.19
DENND4AQ7Z401 PPFIA1-202ENST00000389547 4133 ntAPPRIS ALT1 TSL 1 (best) BASIC16.23■□□□□ 0.19
DENND4AQ7Z401 PCBP4-205ENST00000461554 2147 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
DENND4AQ7Z401 MAPK14-204ENST00000468133 1376 ntTSL 2 BASIC16.23■□□□□ 0.19
DENND4AQ7Z401 BX276092.9-202ENST00000636096 1722 ntAPPRIS P5 TSL 5 BASIC16.23■□□□□ 0.19
DENND4AQ7Z401 RAPSN-202ENST00000352508 1452 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
DENND4AQ7Z401 LGR4-201ENST00000379214 5206 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
DENND4AQ7Z401 NCKAP1-201ENST00000360982 4989 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
DENND4AQ7Z401 MTHFR-217ENST00000641820 1569 ntBASIC16.23■□□□□ 0.19
DENND4AQ7Z401 MEF2A-204ENST00000557785 2854 ntAPPRIS ALT1 TSL 5 BASIC16.23■□□□□ 0.19
DENND4AQ7Z401 ETFA-203ENST00000557943 2287 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
DENND4AQ7Z401 FAM156B-207ENST00000616419 2032 ntAPPRIS P2 TSL 2 BASIC16.23■□□□□ 0.19
DENND4AQ7Z401 FAM156A-212ENST00000617970 2032 ntAPPRIS P2 TSL 2 BASIC16.23■□□□□ 0.19
DENND4AQ7Z401 CDH22-203ENST00000537909 3902 ntAPPRIS P1 TSL 2 BASIC16.23■□□□□ 0.19
DENND4AQ7Z401 CHI3L2-212ENST00000524472 1435 ntTSL 2 BASIC16.23■□□□□ 0.19
DENND4AQ7Z401 SNRPD3-201ENST00000215829 1763 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
DENND4AQ7Z401 COL9A1-201ENST00000320755 3059 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
DENND4AQ7Z401 AGGF1P2-201ENST00000426656 2106 ntBASIC16.23■□□□□ 0.19
DENND4AQ7Z401 AL096870.2-201ENST00000565988 2108 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
DENND4AQ7Z401 ZC2HC1C-202ENST00000439583 1509 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
DENND4AQ7Z401 NSUN5-202ENST00000310326 1602 ntAPPRIS ALT2 TSL 2 BASIC16.22■□□□□ 0.19
DENND4AQ7Z401 TMEM52-203ENST00000378602 1118 ntAPPRIS ALT2 TSL 1 (best) BASIC16.22■□□□□ 0.19
DENND4AQ7Z401 AL021707.3-201ENST00000418803 527 ntTSL 5 BASIC16.22■□□□□ 0.19
DENND4AQ7Z401 AC139149.1-202ENST00000442532 783 ntTSL 3 BASIC16.22■□□□□ 0.19
DENND4AQ7Z401 RPSAP36-202ENST00000494591 1261 ntBASIC16.22■□□□□ 0.19
DENND4AQ7Z401 AC074194.1-201ENST00000505025 622 ntTSL 4 BASIC16.22■□□□□ 0.19
DENND4AQ7Z401 GPX4-206ENST00000588919 803 ntTSL 2 BASIC16.22■□□□□ 0.19
DENND4AQ7Z401 ZNF347-208ENST00000601804 496 ntTSL 4 BASIC16.22■□□□□ 0.19
DENND4AQ7Z401 MUL1-201ENST00000264198 2438 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
DENND4AQ7Z401 CCT2-202ENST00000543146 2189 ntTSL 2 BASIC16.22■□□□□ 0.19
DENND4AQ7Z401 FAM20A-205ENST00000592554 2955 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
DENND4AQ7Z401 EDN3-202ENST00000337938 2636 ntAPPRIS P4 TSL 1 (best) BASIC16.22■□□□□ 0.19
DENND4AQ7Z401 MXRA8-209ENST00000477278 2728 ntTSL 5 BASIC16.22■□□□□ 0.19
DENND4AQ7Z401 C7orf49-201ENST00000393114 1482 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
DENND4AQ7Z401 CCM2-207ENST00000475551 2471 ntAPPRIS ALT2 TSL 2 BASIC16.22■□□□□ 0.19
DENND4AQ7Z401 TNIP1-208ENST00000520931 2680 ntAPPRIS ALT2 TSL 1 (best) BASIC16.22■□□□□ 0.19
DENND4AQ7Z401 Z98749.3-201ENST00000400206 1770 ntAPPRIS P1 TSL 2 BASIC16.22■□□□□ 0.19
DENND4AQ7Z401 FXYD3-202ENST00000346446 1320 ntTSL 2 BASIC16.22■□□□□ 0.19
DENND4AQ7Z401 HOOK2-202ENST00000397668 2513 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
DENND4AQ7Z401 GPAT3-202ENST00000395226 2631 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
DENND4AQ7Z401 ANKRD33-202ENST00000340970 1507 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
DENND4AQ7Z401 FAM49B-223ENST00000522746 2196 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
DENND4AQ7Z401 WNT2-201ENST00000265441 2907 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
DENND4AQ7Z401 PEA15-202ENST00000368076 2694 ntTSL 2 BASIC16.22■□□□□ 0.19
DENND4AQ7Z401 TSNARE1-201ENST00000307180 1907 ntAPPRIS ALT2 TSL 5 BASIC16.22■□□□□ 0.19
DENND4AQ7Z401 GPS1-202ENST00000320548 1949 ntTSL 2 BASIC16.22■□□□□ 0.19
DENND4AQ7Z401 TCEAL1-203ENST00000372626 721 ntAPPRIS P1 TSL 2 BASIC16.22■□□□□ 0.19
DENND4AQ7Z401 MEMO1-204ENST00000407893 682 ntTSL 5 BASIC16.22■□□□□ 0.19
DENND4AQ7Z401 FAM197Y7-201ENST00000432892 766 ntBASIC16.22■□□□□ 0.19
DENND4AQ7Z401 HCST-202ENST00000437550 445 ntAPPRIS ALT2 TSL 1 (best) BASIC16.22■□□□□ 0.19
DENND4AQ7Z401 ARTN-209ENST00000479128 471 ntTSL 3 BASIC16.22■□□□□ 0.19
DENND4AQ7Z401 HIST2H2BC-201ENST00000498492 580 ntBASIC16.22■□□□□ 0.19
DENND4AQ7Z401 KRT18P25-201ENST00000508931 1278 ntBASIC16.22■□□□□ 0.19
DENND4AQ7Z401 SLC45A2-204ENST00000509381 1040 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
DENND4AQ7Z401 IL32-222ENST00000533097 814 ntAPPRIS P4 TSL 2 BASIC16.22■□□□□ 0.19
DENND4AQ7Z401 AC008403.1-201ENST00000595676 443 ntAPPRIS P1 TSL 2 BASIC16.22■□□□□ 0.19
DENND4AQ7Z401 AC243967.2-201ENST00000601409 567 ntTSL 4 BASIC16.22■□□□□ 0.19
DENND4AQ7Z401 AC145423.3-201ENST00000615987 467 ntBASIC16.22■□□□□ 0.19
DENND4AQ7Z401 IL32-201ENST00000008180 1056 ntAPPRIS ALT2 TSL 2 BASIC16.22■□□□□ 0.19
DENND4AQ7Z401 AC012313.1-201ENST00000593393 3059 ntBASIC16.22■□□□□ 0.19
DENND4AQ7Z401 MAEA-202ENST00000303400 2222 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
DENND4AQ7Z401 C2orf81-206ENST00000640868 2407 ntAPPRIS ALT2 BASIC16.22■□□□□ 0.19
DENND4AQ7Z401 NOS2P2-202ENST00000639528 1659 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
DENND4AQ7Z401 XRCC1-202ENST00000543982 1994 ntTSL 2 BASIC16.22■□□□□ 0.19
DENND4AQ7Z401 PGM5-202ENST00000396396 3338 ntAPPRIS P1 TSL 2 BASIC16.22■□□□□ 0.19
DENND4AQ7Z401 KCNJ8-201ENST00000240662 2389 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
DENND4AQ7Z401 PARP6-220ENST00000569795 2855 ntAPPRIS P1 TSL 5 BASIC16.22■□□□□ 0.19
DENND4AQ7Z401 NMNAT3-203ENST00000413939 1711 ntTSL 2 BASIC16.21■□□□□ 0.19
DENND4AQ7Z401 AL365199.1-201ENST00000421320 1714 ntTSL 2 BASIC16.21■□□□□ 0.19
DENND4AQ7Z401 PNLDC1-202ENST00000392167 1816 ntAPPRIS P1 TSL 2 BASIC16.21■□□□□ 0.19
DENND4AQ7Z401 GAB1-201ENST00000262994 2648 ntAPPRIS ALT1 TSL 1 (best) BASIC16.21■□□□□ 0.19
DENND4AQ7Z401 ATP6V0E2-212ENST00000611515 2565 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
DENND4AQ7Z401 TLE3-205ENST00000539550 2464 ntTSL 2 BASIC16.21■□□□□ 0.19
DENND4AQ7Z401 ATP6AP2-215ENST00000636409 1962 ntAPPRIS ALT2 TSL 2 BASIC16.21■□□□□ 0.19
DENND4AQ7Z401 LTBP3-201ENST00000301873 4443 ntAPPRIS ALT2 TSL 2 BASIC16.21■□□□□ 0.19
DENND4AQ7Z401 TEX29-201ENST00000283547 709 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
DENND4AQ7Z401 OSM-202ENST00000403389 1000 ntAPPRIS ALT2 TSL 3 BASIC16.21■□□□□ 0.19
DENND4AQ7Z401 AL355483.2-201ENST00000421637 675 ntTSL 3 BASIC16.21■□□□□ 0.19
DENND4AQ7Z401 BMS1P17-203ENST00000444357 552 ntTSL 4 BASIC16.21■□□□□ 0.19
DENND4AQ7Z401 HOMER2P2-201ENST00000451621 847 ntBASIC16.21■□□□□ 0.19
DENND4AQ7Z401 AC129492.3-201ENST00000498285 460 ntAPPRIS P1 TSL 4 BASIC16.21■□□□□ 0.19
DENND4AQ7Z401 AC012640.1-201ENST00000509915 688 ntTSL 3 BASIC16.21■□□□□ 0.19
DENND4AQ7Z401 LSM1-203ENST00000520755 975 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
DENND4AQ7Z401 SDHD-202ENST00000525291 790 ntTSL 3 BASIC16.21■□□□□ 0.19
DENND4AQ7Z401 ACR-203ENST00000529621 708 ntTSL 5 BASIC16.21■□□□□ 0.19
DENND4AQ7Z401 AC084859.1-201ENST00000533002 670 ntTSL 4 BASIC16.21■□□□□ 0.19
DENND4AQ7Z401 MIR4741-201ENST00000579822 90 ntBASIC16.21■□□□□ 0.19
DENND4AQ7Z401 LINC01278-203ENST00000608788 820 ntTSL 5 BASIC16.21■□□□□ 0.19
DENND4AQ7Z401 AC097724.1-201ENST00000609581 426 ntBASIC16.21■□□□□ 0.19
DENND4AQ7Z401 BMS1P22-203ENST00000609679 552 ntTSL 4 BASIC16.21■□□□□ 0.19
DENND4AQ7Z401 LINC01278-207ENST00000610234 555 ntTSL 4 BASIC16.21■□□□□ 0.19
DENND4AQ7Z401 FOXA1-201ENST00000250448 2862 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
DENND4AQ7Z401 EWSAT1-206ENST00000558922 1725 ntTSL 5 BASIC16.21■□□□□ 0.19
DENND4AQ7Z401 CENPT-235ENST00000626059 1737 ntTSL 5 BASIC16.21■□□□□ 0.19
DENND4AQ7Z401 AC018735.1-201ENST00000437208 1502 ntBASIC16.21■□□□□ 0.19
DENND4AQ7Z401 CNN1-202ENST00000535659 1527 ntTSL 2 BASIC16.21■□□□□ 0.19
DENND4AQ7Z401 AC100861.1-202ENST00000500853 1970 ntTSL 2 BASIC16.21■□□□□ 0.19
DENND4AQ7Z401 OSBPL1A-203ENST00000399441 1887 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
Retrieved 100 of 98,524 protein–RNA pairs in 30.5 ms