Protein–RNA interactions for Protein: Q70EL2

USP45, Ubiquitin carboxyl-terminal hydrolase 45, humanhuman

Predictions only

Length 814 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP45Q70EL2 ACSF3-204ENST00000406948 2247 ntAPPRIS P1 TSL 2 BASIC16.11■□□□□ 0.17
USP45Q70EL2 SLFNL1-201ENST00000302946 1951 ntAPPRIS P3 TSL 1 (best) BASIC16.11■□□□□ 0.17
USP45Q70EL2 ATP6AP2-215ENST00000636409 1962 ntAPPRIS ALT2 TSL 2 BASIC16.11■□□□□ 0.17
USP45Q70EL2 PDAP1-201ENST00000350498 2546 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
USP45Q70EL2 ARHGEF28-201ENST00000296794 5246 ntTSL 5 BASIC16.11■□□□□ 0.17
USP45Q70EL2 FDPS-201ENST00000356657 1478 ntAPPRIS P3 TSL 1 (best) BASIC16.11■□□□□ 0.17
USP45Q70EL2 MEAF6-201ENST00000296214 1525 ntAPPRIS ALT1 TSL 1 (best) BASIC16.11■□□□□ 0.17
USP45Q70EL2 CXXC1-201ENST00000285106 2936 ntAPPRIS P3 TSL 1 (best) BASIC16.11■□□□□ 0.17
USP45Q70EL2 LRRC20-206ENST00000395011 2903 ntTSL 4 BASIC16.11■□□□□ 0.17
USP45Q70EL2 PKDREJ-201ENST00000253255 7693 ntAPPRIS P1 BASIC16.11■□□□□ 0.17
USP45Q70EL2 RPL36-201ENST00000347512 707 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
USP45Q70EL2 RBM3-202ENST00000376755 1130 ntAPPRIS P1 TSL 2 BASIC16.11■□□□□ 0.17
USP45Q70EL2 LINC01121-201ENST00000378479 1095 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
USP45Q70EL2 UBE2F-202ENST00000409332 1138 ntTSL 5 BASIC16.11■□□□□ 0.17
USP45Q70EL2 RPL37AP1-201ENST00000412502 279 ntBASIC16.11■□□□□ 0.17
USP45Q70EL2 AL365255.1-202ENST00000413887 363 ntTSL 5 BASIC16.11■□□□□ 0.17
USP45Q70EL2 NSUN5P1-208ENST00000473960 500 ntTSL 3 BASIC16.11■□□□□ 0.17
USP45Q70EL2 AC087392.4-201ENST00000574560 486 ntTSL 3 BASIC16.11■□□□□ 0.17
USP45Q70EL2 AL355385.1-201ENST00000606123 409 ntBASIC16.11■□□□□ 0.17
USP45Q70EL2 TEX28P1-201ENST00000613479 1221 ntBASIC16.11■□□□□ 0.17
USP45Q70EL2 TEX28P2-201ENST00000617764 1221 ntBASIC16.11■□□□□ 0.17
USP45Q70EL2 FBXO18-201ENST00000362091 3560 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
USP45Q70EL2 AC068831.3-201ENST00000553321 1858 ntTSL 2 BASIC16.11■□□□□ 0.17
USP45Q70EL2 CTCF-201ENST00000264010 3939 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
USP45Q70EL2 PPHLN1-204ENST00000358314 1643 ntTSL 2 BASIC16.11■□□□□ 0.17
USP45Q70EL2 AC134407.2-201ENST00000625089 1978 ntBASIC16.11■□□□□ 0.17
USP45Q70EL2 ADSL-220ENST00000636714 1734 ntAPPRIS ALT1 TSL 5 BASIC16.11■□□□□ 0.17
USP45Q70EL2 DTD2-202ENST00000356180 1400 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
USP45Q70EL2 ATP6V0E1-203ENST00000519374 1433 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
USP45Q70EL2 AC100757.3-201ENST00000622361 1406 ntBASIC16.11■□□□□ 0.17
USP45Q70EL2 GEM-202ENST00000396194 2103 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
USP45Q70EL2 MCM7-203ENST00000354230 2975 ntTSL 2 BASIC16.1■□□□□ 0.17
USP45Q70EL2 BNIP3P1-202ENST00000550043 1585 ntBASIC16.1■□□□□ 0.17
USP45Q70EL2 ITGA7-202ENST00000347027 4084 ntAPPRIS ALT2 TSL 5 BASIC16.1■□□□□ 0.17
USP45Q70EL2 NDUFS8-201ENST00000313468 791 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
USP45Q70EL2 PDSS2-201ENST00000369031 1236 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
USP45Q70EL2 HDAC8-202ENST00000373556 704 ntTSL 2 BASIC16.1■□□□□ 0.17
USP45Q70EL2 C1QA-201ENST00000374642 1143 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
USP45Q70EL2 HNRNPA3P1-201ENST00000401429 1139 ntBASIC16.1■□□□□ 0.17
USP45Q70EL2 SYS1-203ENST00000414310 795 ntTSL 3 BASIC16.1■□□□□ 0.17
USP45Q70EL2 RNF183-202ENST00000416588 849 ntAPPRIS P1 TSL 3 BASIC16.1■□□□□ 0.17
USP45Q70EL2 ELP6-209ENST00000446787 894 ntTSL 3 BASIC16.1■□□□□ 0.17
USP45Q70EL2 HNRNPA3P5-201ENST00000455201 833 ntBASIC16.1■□□□□ 0.17
USP45Q70EL2 FXR1-221ENST00000491674 365 ntTSL 2 BASIC16.1■□□□□ 0.17
USP45Q70EL2 SSBP1-214ENST00000498107 636 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
USP45Q70EL2 RNA5SP421-201ENST00000516864 134 ntBASIC16.1■□□□□ 0.17
USP45Q70EL2 AL139349.1-201ENST00000530479 577 ntTSL 4 BASIC16.1■□□□□ 0.17
USP45Q70EL2 BRK1-201ENST00000530758 1233 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
USP45Q70EL2 TRMT112-206ENST00000544844 1106 ntAPPRIS P3 TSL 1 (best) BASIC16.1■□□□□ 0.17
USP45Q70EL2 MAPKAPK5-203ENST00000547305 494 ntTSL 2 BASIC16.1■□□□□ 0.17
USP45Q70EL2 NFATC3-222ENST00000575270 3824 ntTSL 5 BASIC16.1■□□□□ 0.17
USP45Q70EL2 AC116003.1-201ENST00000578340 536 ntTSL 3 BASIC16.1■□□□□ 0.17
USP45Q70EL2 AC087645.2-202ENST00000586583 643 ntTSL 4 BASIC16.1■□□□□ 0.17
USP45Q70EL2 AL390955.2-201ENST00000603032 514 ntBASIC16.1■□□□□ 0.17
USP45Q70EL2 CLN3-246ENST00000636228 1224 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
USP45Q70EL2 GFRA2-208ENST00000524240 4921 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
USP45Q70EL2 WASF1-206ENST00000392588 3122 ntAPPRIS P1 TSL 5 BASIC16.1■□□□□ 0.17
USP45Q70EL2 ARHGAP22-201ENST00000249601 2751 ntAPPRIS P3 TSL 1 (best) BASIC16.1■□□□□ 0.17
USP45Q70EL2 BAP1-202ENST00000460680 3937 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
USP45Q70EL2 TTLL3-213ENST00000430793 2097 ntTSL 2 BASIC16.1■□□□□ 0.17
USP45Q70EL2 RAD51C-215ENST00000583539 1319 ntAPPRIS ALT2 TSL 2 BASIC16.1■□□□□ 0.17
USP45Q70EL2 SPINT1-202ENST00000562057 2456 ntAPPRIS ALT2 TSL 1 (best) BASIC16.1■□□□□ 0.17
USP45Q70EL2 TTC29-202ENST00000398886 1729 ntAPPRIS ALT2 TSL 5 BASIC16.1■□□□□ 0.17
USP45Q70EL2 PCNX3-201ENST00000355703 7105 ntAPPRIS P1 TSL 5 BASIC16.1■□□□□ 0.17
USP45Q70EL2 SARAF-201ENST00000256255 2154 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
USP45Q70EL2 CTSL-203ENST00000343150 2177 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
USP45Q70EL2 ZNF619-205ENST00000456778 2192 ntTSL 2 BASIC16.1■□□□□ 0.17
USP45Q70EL2 NTRK2-205ENST00000376208 8178 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
USP45Q70EL2 HELZ2-202ENST00000427522 7827 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
USP45Q70EL2 KRT8P37-201ENST00000451609 1420 ntBASIC16.1■□□□□ 0.17
USP45Q70EL2 AMOTL2-211ENST00000513145 2653 ntAPPRIS ALT1 TSL 1 (best) BASIC16.1■□□□□ 0.17
USP45Q70EL2 TAGLN3-202ENST00000393917 1488 ntAPPRIS P1 TSL 5 BASIC16.1■□□□□ 0.17
USP45Q70EL2 MYB-203ENST00000341911 3672 ntAPPRIS ALT1 TSL 1 (best) BASIC16.09■□□□□ 0.17
USP45Q70EL2 NEDD4-202ENST00000435532 5869 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
USP45Q70EL2 PDK1-203ENST00000410055 2990 ntAPPRIS P3 TSL 1 (best) BASIC16.09■□□□□ 0.17
USP45Q70EL2 CTSO-201ENST00000433477 2954 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
USP45Q70EL2 FBXL16-202ENST00000397621 3547 ntAPPRIS P1 TSL 5 BASIC16.09■□□□□ 0.17
USP45Q70EL2 MPP2-208ENST00000520305 2111 ntTSL 2 BASIC16.09■□□□□ 0.17
USP45Q70EL2 DNM2-202ENST00000359692 3588 ntAPPRIS P5 TSL 1 (best) BASIC16.09■□□□□ 0.17
USP45Q70EL2 TACR2-203ENST00000619173 1713 ntTSL 5 BASIC16.09■□□□□ 0.17
USP45Q70EL2 DCP1B-202ENST00000535873 2231 ntTSL 2 BASIC16.09■□□□□ 0.17
USP45Q70EL2 SLC25A45-202ENST00000398802 2286 ntAPPRIS P1 TSL 5 BASIC16.09■□□□□ 0.17
USP45Q70EL2 ARHGAP27-208ENST00000528384 2296 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
USP45Q70EL2 BTN1A1-202ENST00000613186 2266 ntTSL 2 BASIC16.09■□□□□ 0.17
USP45Q70EL2 LRP10-201ENST00000359591 6886 ntAPPRIS P2 TSL 1 (best) BASIC16.09■□□□□ 0.17
USP45Q70EL2 AL022068.1-202ENST00000432171 794 ntTSL 3 BASIC16.09■□□□□ 0.17
USP45Q70EL2 U52111.1-201ENST00000434284 914 ntTSL 3 BASIC16.09■□□□□ 0.17
USP45Q70EL2 AL732437.1-201ENST00000442008 595 ntTSL 4 BASIC16.09■□□□□ 0.17
USP45Q70EL2 AL512638.1-201ENST00000457493 794 ntBASIC16.09■□□□□ 0.17
USP45Q70EL2 CCDC85C-204ENST00000555822 930 ntTSL 5 BASIC16.09■□□□□ 0.17
USP45Q70EL2 COQ9-214ENST00000567933 882 ntTSL 3 BASIC16.09■□□□□ 0.17
USP45Q70EL2 AC141424.1-203ENST00000599026 887 ntTSL 5 BASIC16.09■□□□□ 0.17
USP45Q70EL2 AL359644.1-202ENST00000637541 571 ntTSL 3 BASIC16.09■□□□□ 0.17
USP45Q70EL2 FAM76B-201ENST00000358780 3952 ntAPPRIS P3 TSL 1 (best) BASIC16.09■□□□□ 0.17
USP45Q70EL2 KCNQ2-209ENST00000625514 2925 ntTSL 5 BASIC16.09■□□□□ 0.17
USP45Q70EL2 SLC25A35-202ENST00000577745 1860 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
USP45Q70EL2 CDC14A-202ENST00000361544 2417 ntAPPRIS P4 TSL 1 (best) BASIC16.09■□□□□ 0.17
USP45Q70EL2 TCAF2-203ENST00000425618 2448 ntTSL 2 BASIC16.09■□□□□ 0.17
USP45Q70EL2 C21orf58-201ENST00000291691 2975 ntAPPRIS P3 TSL 2 BASIC16.09■□□□□ 0.17
USP45Q70EL2 ADRB3-201ENST00000345060 2950 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Retrieved 100 of 98,524 protein–RNA pairs in 42.1 ms