Protein–RNA interactions for Protein: Q6PD62

CTR9, RNA polymerase-associated protein CTR9 homolog, humanhuman

Predictions only

Length 1,173 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTR9Q6PD62 CSAD-208ENST00000444623 2122 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
CTR9Q6PD62 PDAP1-201ENST00000350498 2546 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
CTR9Q6PD62 FHL1-207ENST00000394155 2706 ntTSL 5 BASIC19.06■□□□□ 0.64
CTR9Q6PD62 MYCL-203ENST00000397332 3256 ntAPPRIS ALT2 TSL 1 (best) BASIC19.06■□□□□ 0.64
CTR9Q6PD62 PDE4C-201ENST00000262805 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC19.06■□□□□ 0.64
CTR9Q6PD62 AC006449.5-201ENST00000610658 2098 ntBASIC19.06■□□□□ 0.64
CTR9Q6PD62 LDB3-208ENST00000623007 1664 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
CTR9Q6PD62 BTBD7P1-201ENST00000447253 1453 ntBASIC19.06■□□□□ 0.64
CTR9Q6PD62 LCE5A-201ENST00000334269 819 ntAPPRIS P1 TSL 3 BASIC19.06■□□□□ 0.64
CTR9Q6PD62 GUK1-210ENST00000391865 990 ntAPPRIS ALT1 TSL 1 (best) BASIC19.06■□□□□ 0.64
CTR9Q6PD62 GOLGA6L11P-201ENST00000417252 1298 ntBASIC19.06■□□□□ 0.64
CTR9Q6PD62 RAD18-204ENST00000418463 563 ntTSL 4 BASIC19.06■□□□□ 0.64
CTR9Q6PD62 RAD18-205ENST00000421052 582 ntTSL 3 BASIC19.06■□□□□ 0.64
CTR9Q6PD62 FXR1-221ENST00000491674 365 ntTSL 2 BASIC19.06■□□□□ 0.64
CTR9Q6PD62 RPL10P19-202ENST00000520582 722 ntTSL 3 BASIC19.06■□□□□ 0.64
CTR9Q6PD62 AC124067.4-202ENST00000522471 397 ntTSL 3 BASIC19.06■□□□□ 0.64
CTR9Q6PD62 RAB35-202ENST00000534951 939 ntTSL 2 BASIC19.06■□□□□ 0.64
CTR9Q6PD62 AC135586.1-201ENST00000539323 574 ntBASIC19.06■□□□□ 0.64
CTR9Q6PD62 AL161757.4-201ENST00000554149 621 ntTSL 3 BASIC19.06■□□□□ 0.64
CTR9Q6PD62 AC004790.1-201ENST00000612686 536 ntBASIC19.06■□□□□ 0.64
CTR9Q6PD62 SLC25A23-202ENST00000301454 3425 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
CTR9Q6PD62 ATP6V0E2-212ENST00000611515 2565 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
CTR9Q6PD62 ANXA4-202ENST00000409920 1414 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
CTR9Q6PD62 KRT8P37-201ENST00000451609 1420 ntBASIC19.06■□□□□ 0.64
CTR9Q6PD62 PRSS16-201ENST00000230582 2716 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
CTR9Q6PD62 PCBP1-201ENST00000303577 1750 ntAPPRIS P1 BASIC19.06■□□□□ 0.64
CTR9Q6PD62 MTHFR-217ENST00000641820 1569 ntBASIC19.06■□□□□ 0.64
CTR9Q6PD62 RTN1-201ENST00000267484 3435 ntAPPRIS P4 TSL 1 (best) BASIC19.06■□□□□ 0.64
CTR9Q6PD62 TCF3-212ENST00000588136 2658 ntAPPRIS ALT2 TSL 2 BASIC19.06■□□□□ 0.64
CTR9Q6PD62 MAP3K11-201ENST00000309100 3566 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
CTR9Q6PD62 CHAT-203ENST00000351556 2286 ntAPPRIS ALT2 TSL 5 BASIC19.05■□□□□ 0.64
CTR9Q6PD62 BMP3-201ENST00000282701 5734 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
CTR9Q6PD62 DHX30-205ENST00000445061 4065 ntAPPRIS P2 TSL 1 (best) BASIC19.05■□□□□ 0.64
CTR9Q6PD62 L2HGDH-202ENST00000267436 6414 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
CTR9Q6PD62 CDK4-201ENST00000257904 2076 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
CTR9Q6PD62 SMIM5-201ENST00000375215 1546 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
CTR9Q6PD62 TBX5-203ENST00000405440 2203 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
CTR9Q6PD62 ACY3-201ENST00000255082 1300 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
CTR9Q6PD62 LINC01301-205ENST00000531654 1347 ntTSL 5 BASIC19.05■□□□□ 0.64
CTR9Q6PD62 PDE1C-201ENST00000321453 2898 ntAPPRIS ALT1 TSL 2 BASIC19.05■□□□□ 0.64
CTR9Q6PD62 SP100-205ENST00000409824 1802 ntTSL 5 BASIC19.05■□□□□ 0.64
CTR9Q6PD62 C7orf31-201ENST00000283905 2673 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
CTR9Q6PD62 ARSI-201ENST00000328668 3161 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
CTR9Q6PD62 MFSD11-202ENST00000355954 2832 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
CTR9Q6PD62 NPM2-201ENST00000289820 1100 ntAPPRIS P2 TSL 1 (best) BASIC19.05■□□□□ 0.64
CTR9Q6PD62 ENDOV-201ENST00000323854 1226 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
CTR9Q6PD62 SYCE1-202ENST00000343131 1113 ntAPPRIS ALT2 TSL 1 (best) BASIC19.05■□□□□ 0.64
CTR9Q6PD62 NPM2-202ENST00000381530 925 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
CTR9Q6PD62 LRP5L-201ENST00000402785 1193 ntAPPRIS P2 TSL 1 (best) BASIC19.05■□□□□ 0.64
CTR9Q6PD62 AC114501.2-201ENST00000439631 535 ntBASIC19.05■□□□□ 0.64
CTR9Q6PD62 AL158198.1-201ENST00000449143 380 ntTSL 3 BASIC19.05■□□□□ 0.64
CTR9Q6PD62 RBAKDN-201ENST00000498308 514 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
CTR9Q6PD62 AC008406.2-201ENST00000507058 532 ntTSL 3 BASIC19.05■□□□□ 0.64
CTR9Q6PD62 SPDYE18-201ENST00000510091 1050 ntBASIC19.05■□□□□ 0.64
CTR9Q6PD62 MPP2-208ENST00000520305 2111 ntTSL 2 BASIC19.05■□□□□ 0.64
CTR9Q6PD62 SUOX-214ENST00000551841 906 ntTSL 3 BASIC19.05■□□□□ 0.64
CTR9Q6PD62 GNG2-213ENST00000556766 2125 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
CTR9Q6PD62 KLK3-204ENST00000593997 1035 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
CTR9Q6PD62 SNHG8-201ENST00000602414 672 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
CTR9Q6PD62 SNHG8-205ENST00000602819 470 ntTSL 2 BASIC19.05■□□□□ 0.64
CTR9Q6PD62 RNA5-8SN1-201ENST00000610460 153 ntBASIC19.05■□□□□ 0.64
CTR9Q6PD62 RNA5-8SN5-202ENST00000612463 153 ntBASIC19.05■□□□□ 0.64
CTR9Q6PD62 RNA5-8SN4-201ENST00000613359 153 ntBASIC19.05■□□□□ 0.64
CTR9Q6PD62 RNA5-8SN5-201ENST00000619471 153 ntBASIC19.05■□□□□ 0.64
CTR9Q6PD62 AL109936.8-201ENST00000641772 604 ntBASIC19.05■□□□□ 0.64
CTR9Q6PD62 AK4-207ENST00000545314 6887 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
CTR9Q6PD62 F3-201ENST00000334047 2287 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
CTR9Q6PD62 RGS7-203ENST00000366564 2295 ntAPPRIS ALT2 TSL 1 (best) BASIC19.05■□□□□ 0.64
CTR9Q6PD62 GCK-209ENST00000616242 2260 ntTSL 5 BASIC19.05■□□□□ 0.64
CTR9Q6PD62 MAGEA2B-201ENST00000331220 1946 ntAPPRIS P1 TSL 2 BASIC19.05■□□□□ 0.64
CTR9Q6PD62 DAND5-202ENST00000585548 1731 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
CTR9Q6PD62 TDRD7-201ENST00000355295 3834 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
CTR9Q6PD62 DLX4-201ENST00000240306 2034 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
CTR9Q6PD62 NR2E3-204ENST00000621736 2032 ntTSL 2 BASIC19.05■□□□□ 0.64
CTR9Q6PD62 SYT6-205ENST00000609117 4424 ntTSL 5 BASIC19.05■□□□□ 0.64
CTR9Q6PD62 ZBTB45P2-201ENST00000452245 1531 ntBASIC19.05■□□□□ 0.64
CTR9Q6PD62 LTA-214ENST00000454783 1507 ntAPPRIS P1 TSL 2 BASIC19.05■□□□□ 0.64
CTR9Q6PD62 SLC2A6-201ENST00000371897 2301 ntTSL 2 BASIC19.05■□□□□ 0.64
CTR9Q6PD62 SNAPC4-201ENST00000298532 5010 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
CTR9Q6PD62 ACOT9-201ENST00000336430 1675 ntAPPRIS P3 TSL 1 (best) BASIC19.05■□□□□ 0.64
CTR9Q6PD62 PRMT6-201ENST00000370078 2616 ntAPPRIS P1 BASIC19.04■□□□□ 0.64
CTR9Q6PD62 KCNQ2-209ENST00000625514 2925 ntTSL 5 BASIC19.04■□□□□ 0.64
CTR9Q6PD62 DUSP8-201ENST00000331588 4455 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
CTR9Q6PD62 UBQLN1-201ENST00000257468 2299 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
CTR9Q6PD62 ASAH1-223ENST00000636171 2283 ntTSL 5 BASIC19.04■□□□□ 0.64
CTR9Q6PD62 ZNF671-201ENST00000317398 2431 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
CTR9Q6PD62 UNG-201ENST00000242576 2071 ntAPPRIS P4 TSL 1 (best) BASIC19.04■□□□□ 0.64
CTR9Q6PD62 HSD3B7-201ENST00000262520 2200 ntTSL 2 BASIC19.04■□□□□ 0.64
CTR9Q6PD62 CRYZL1-202ENST00000361534 2224 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
CTR9Q6PD62 BAIAP2-219ENST00000575245 2229 ntTSL 5 BASIC19.04■□□□□ 0.64
CTR9Q6PD62 CHRNB2-201ENST00000368476 5867 ntAPPRIS P2 TSL 1 (best) BASIC19.04■□□□□ 0.64
CTR9Q6PD62 SIK3-205ENST00000446921 3858 ntAPPRIS ALT2 TSL 1 (best) BASIC19.04■□□□□ 0.64
CTR9Q6PD62 PRAG1-201ENST00000615670 4903 ntAPPRIS P1 TSL 5 BASIC19.04■□□□□ 0.64
CTR9Q6PD62 RUSC1-201ENST00000292254 2163 ntAPPRIS P3 TSL 1 (best) BASIC19.04■□□□□ 0.64
CTR9Q6PD62 CIDEA-201ENST00000320477 828 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
CTR9Q6PD62 HPS1-202ENST00000338546 1580 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
CTR9Q6PD62 CBLC-202ENST00000341505 1441 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
CTR9Q6PD62 TRMT44-201ENST00000389737 2799 ntAPPRIS P2 TSL 5 BASIC19.04■□□□□ 0.64
CTR9Q6PD62 ADM2-201ENST00000395737 535 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
CTR9Q6PD62 AZGP1P1-201ENST00000411909 902 ntBASIC19.04■□□□□ 0.64
Retrieved 100 of 98,524 protein–RNA pairs in 42.6 ms