Protein–RNA interactions for Protein: Q68DV7

RNF43, E3 ubiquitin-protein ligase RNF43, humanhuman

Predictions only

Length 783 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF43Q68DV7 DCUN1D5-209ENST00000531543 1030 ntTSL 5 BASIC16.92■□□□□ 0.3
RNF43Q68DV7 SECTM1-202ENST00000580437 1030 ntAPPRIS ALT2 TSL 2 BASIC16.92■□□□□ 0.3
RNF43Q68DV7 IFT20-215ENST00000585313 852 ntAPPRIS P4 TSL 3 BASIC16.92■□□□□ 0.3
RNF43Q68DV7 MOB3A-209ENST00000592280 1071 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
RNF43Q68DV7 BCL2L12-206ENST00000598306 510 ntTSL 5 BASIC16.92■□□□□ 0.3
RNF43Q68DV7 FHL2-212ENST00000607522 759 ntTSL 2 BASIC16.92■□□□□ 0.3
RNF43Q68DV7 AL390754.1-201ENST00000619088 582 ntBASIC16.92■□□□□ 0.3
RNF43Q68DV7 AC092811.2-201ENST00000632561 559 ntTSL 4 BASIC16.92■□□□□ 0.3
RNF43Q68DV7 AL358472.5-202ENST00000641448 1267 ntBASIC16.92■□□□□ 0.3
RNF43Q68DV7 ZNF324-203ENST00000536459 5653 ntAPPRIS P1 TSL 2 BASIC16.92■□□□□ 0.3
RNF43Q68DV7 MIEF1-202ENST00000402881 2269 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
RNF43Q68DV7 FAM135A-205ENST00000418814 6415 ntTSL 5 BASIC16.92■□□□□ 0.3
RNF43Q68DV7 TSPY26P-202ENST00000565928 3884 ntBASIC16.92■□□□□ 0.3
RNF43Q68DV7 GUCD1-204ENST00000407471 3482 ntAPPRIS P3 TSL 5 BASIC16.92■□□□□ 0.3
RNF43Q68DV7 MDGA2-202ENST00000399232 5075 ntAPPRIS ALT2 TSL 1 (best) BASIC16.92■□□□□ 0.3
RNF43Q68DV7 NFATC2-206ENST00000609943 5690 ntAPPRIS ALT2 TSL 1 (best) BASIC16.92■□□□□ 0.3
RNF43Q68DV7 TRAPPC3-210ENST00000617904 1305 ntTSL 2 BASIC16.92■□□□□ 0.3
RNF43Q68DV7 UNC13A-206ENST00000552293 5314 ntAPPRIS ALT2 TSL 5 BASIC16.92■□□□□ 0.3
RNF43Q68DV7 EIF2AK4-201ENST00000263791 5499 ntAPPRIS P1 TSL 2 BASIC16.92■□□□□ 0.3
RNF43Q68DV7 KDM6A-211ENST00000536777 5633 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
RNF43Q68DV7 RASGEF1C-206ENST00000522500 2055 ntTSL 2 BASIC16.92■□□□□ 0.3
RNF43Q68DV7 NSMF-205ENST00000371474 3571 ntAPPRIS ALT1 TSL 1 (best) BASIC16.92■□□□□ 0.3
RNF43Q68DV7 NSMF-208ENST00000437259 3577 ntAPPRIS ALT1 TSL 5 BASIC16.92■□□□□ 0.3
RNF43Q68DV7 FUT7-201ENST00000314412 2584 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
RNF43Q68DV7 PCDHGB2-202ENST00000622527 2588 ntAPPRIS P1 BASIC16.91■□□□□ 0.3
RNF43Q68DV7 PLTP-205ENST00000477313 2255 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
RNF43Q68DV7 ME2P1-201ENST00000426028 1970 ntBASIC16.91■□□□□ 0.3
RNF43Q68DV7 WDR13-202ENST00000376729 5469 ntAPPRIS P1 TSL 5 BASIC16.91■□□□□ 0.3
RNF43Q68DV7 SYT6-205ENST00000609117 4424 ntTSL 5 BASIC16.91■□□□□ 0.3
RNF43Q68DV7 QRICH1-202ENST00000395443 3549 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
RNF43Q68DV7 DBET-201ENST00000630918 3363 ntBASIC16.91■□□□□ 0.3
RNF43Q68DV7 RBPMS-204ENST00000397323 2941 ntAPPRIS P3 TSL 1 (best) BASIC16.91■□□□□ 0.3
RNF43Q68DV7 MBD1-222ENST00000590208 2913 ntAPPRIS ALT2 TSL 1 (best) BASIC16.91■□□□□ 0.3
RNF43Q68DV7 KHDRBS1-202ENST00000327300 2757 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
RNF43Q68DV7 PIGW-204ENST00000614443 2312 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
RNF43Q68DV7 HLA-DQB2-231ENST00000435145 2026 ntBASIC16.91■□□□□ 0.3
RNF43Q68DV7 PLEKHA2-208ENST00000616927 1748 ntTSL 5 BASIC16.91■□□□□ 0.3
RNF43Q68DV7 NFATC4-201ENST00000250373 4749 ntAPPRIS P3 TSL 1 (best) BASIC16.91■□□□□ 0.3
RNF43Q68DV7 KDM4B-211ENST00000611640 5703 ntTSL 5 BASIC16.91■□□□□ 0.3
RNF43Q68DV7 C11orf71-201ENST00000325636 652 ntAPPRIS P3 TSL 1 (best) BASIC16.91■□□□□ 0.3
RNF43Q68DV7 PPP1R27-201ENST00000330261 782 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
RNF43Q68DV7 FAM159B-201ENST00000389074 847 ntAPPRIS P1 TSL 2 BASIC16.91■□□□□ 0.3
RNF43Q68DV7 BAD-202ENST00000394531 631 ntTSL 3 BASIC16.91■□□□□ 0.3
RNF43Q68DV7 GRAP-202ENST00000395635 834 ntTSL 2 BASIC16.91■□□□□ 0.3
RNF43Q68DV7 AL158071.2-201ENST00000423380 815 ntTSL 3 BASIC16.91■□□□□ 0.3
RNF43Q68DV7 PTPRVP-202ENST00000490575 953 ntTSL 5 BASIC16.91■□□□□ 0.3
RNF43Q68DV7 AP005018.1-201ENST00000525475 301 ntBASIC16.91■□□□□ 0.3
RNF43Q68DV7 BAD-207ENST00000544785 525 ntTSL 3 BASIC16.91■□□□□ 0.3
RNF43Q68DV7 AC020765.3-201ENST00000613051 740 ntBASIC16.91■□□□□ 0.3
RNF43Q68DV7 AC090164.4-201ENST00000632451 313 ntTSL 5 BASIC16.91■□□□□ 0.3
RNF43Q68DV7 POLR2A-201ENST00000572844 2083 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
RNF43Q68DV7 ST3GAL2-201ENST00000342907 4450 ntAPPRIS P1 TSL 5 BASIC16.91■□□□□ 0.3
RNF43Q68DV7 GAL3ST1-203ENST00000402321 1908 ntAPPRIS P1 TSL 2 BASIC16.91■□□□□ 0.3
RNF43Q68DV7 CCDC130-204ENST00000586600 1922 ntAPPRIS P1 TSL 5 BASIC16.91■□□□□ 0.3
RNF43Q68DV7 AKR1B15-202ENST00000457545 1621 ntAPPRIS P1 TSL 5 BASIC16.91■□□□□ 0.3
RNF43Q68DV7 AC100830.1-201ENST00000560387 1609 ntTSL 2 BASIC16.91■□□□□ 0.3
RNF43Q68DV7 TBC1D3D-201ENST00000616101 2116 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
RNF43Q68DV7 TBC1D3K-201ENST00000620247 2116 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
RNF43Q68DV7 NOMO1-207ENST00000610363 3765 ntAPPRIS ALT2 TSL 1 (best) BASIC16.91■□□□□ 0.3
RNF43Q68DV7 CLYBL-203ENST00000376355 6771 ntAPPRIS P1 TSL 2 BASIC16.91■□□□□ 0.3
RNF43Q68DV7 MXI1-202ENST00000332674 3470 ntAPPRIS P4 TSL 1 (best) BASIC16.91■□□□□ 0.3
RNF43Q68DV7 BIN3-201ENST00000276416 1835 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
RNF43Q68DV7 EIF2S2-201ENST00000374980 2656 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
RNF43Q68DV7 TGIF1-205ENST00000401449 1670 ntTSL 2 BASIC16.91■□□□□ 0.3
RNF43Q68DV7 CIAPIN1-209ENST00000567518 2016 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
RNF43Q68DV7 NFIX-214ENST00000592199 1509 ntTSL 5 BASIC16.91■□□□□ 0.3
RNF43Q68DV7 FO538757.1-201ENST00000623083 1397 ntBASIC16.9■□□□□ 0.3
RNF43Q68DV7 AK5-203ENST00000354567 3251 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
RNF43Q68DV7 WDR74-205ENST00000525752 1724 ntTSL 5 BASIC16.9■□□□□ 0.3
RNF43Q68DV7 DDX42-208ENST00000578681 4337 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
RNF43Q68DV7 ZFYVE19-203ENST00000355341 2775 ntAPPRIS P3 TSL 1 (best) BASIC16.9■□□□□ 0.3
RNF43Q68DV7 RAB37-208ENST00000402449 1560 ntAPPRIS P3 TSL 2 BASIC16.9■□□□□ 0.3
RNF43Q68DV7 AC008677.1-201ENST00000519230 1561 ntBASIC16.9■□□□□ 0.3
RNF43Q68DV7 KDM6A-212ENST00000543216 5655 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
RNF43Q68DV7 MDM2-209ENST00000393412 1404 ntTSL 5 BASIC16.9■□□□□ 0.3
RNF43Q68DV7 COL4A2-201ENST00000360467 6281 ntAPPRIS P1 TSL 5 BASIC16.9■□□□□ 0.3
RNF43Q68DV7 AC092718.8-201ENST00000640345 2892 ntAPPRIS P1 TSL 5 BASIC16.9■□□□□ 0.3
RNF43Q68DV7 ANXA11-203ENST00000422982 2534 ntAPPRIS P3 TSL 1 (best) BASIC16.9■□□□□ 0.3
RNF43Q68DV7 GLIPR2-205ENST00000619700 1645 ntTSL 3 BASIC16.9■□□□□ 0.3
RNF43Q68DV7 MEGF6-201ENST00000294599 4501 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
RNF43Q68DV7 KIFC1-211ENST00000428849 2706 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
RNF43Q68DV7 BLCAP-202ENST00000397131 633 ntAPPRIS P1 TSL 3 BASIC16.9■□□□□ 0.3
RNF43Q68DV7 BLCAP-203ENST00000397134 566 ntAPPRIS P1 TSL 4 BASIC16.9■□□□□ 0.3
RNF43Q68DV7 WRB-204ENST00000398753 699 ntTSL 3 BASIC16.9■□□□□ 0.3
RNF43Q68DV7 RAC2-204ENST00000406508 893 ntTSL 5 BASIC16.9■□□□□ 0.3
RNF43Q68DV7 SPDYE7P-202ENST00000420373 878 ntBASIC16.9■□□□□ 0.3
RNF43Q68DV7 LINC00351-201ENST00000424926 911 ntTSL 3 BASIC16.9■□□□□ 0.3
RNF43Q68DV7 AL109741.1-201ENST00000432195 403 ntTSL 2 BASIC16.9■□□□□ 0.3
RNF43Q68DV7 AC093724.1-201ENST00000448659 1027 ntBASIC16.9■□□□□ 0.3
RNF43Q68DV7 HEBP2-202ENST00000448741 661 ntTSL 5 BASIC16.9■□□□□ 0.3
RNF43Q68DV7 IQSEC2-204ENST00000485377 835 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
RNF43Q68DV7 ZNF576-206ENST00000533118 867 ntAPPRIS P1 TSL 2 BASIC16.9■□□□□ 0.3
RNF43Q68DV7 RARRES2P9-201ENST00000565168 469 ntBASIC16.9■□□□□ 0.3
RNF43Q68DV7 AC010336.3-201ENST00000597156 667 ntTSL 2 BASIC16.9■□□□□ 0.3
RNF43Q68DV7 PDLIM3-213ENST00000629667 1016 ntTSL 5 BASIC16.9■□□□□ 0.3
RNF43Q68DV7 HFE2-206ENST00000634927 506 ntTSL 4 BASIC16.9■□□□□ 0.3
RNF43Q68DV7 TMEM161A-201ENST00000162044 1820 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
RNF43Q68DV7 CSNK1A1-202ENST00000377843 2559 ntAPPRIS ALT1 TSL 1 (best) BASIC16.9■□□□□ 0.3
RNF43Q68DV7 SIGLEC7-201ENST00000305628 1469 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
RNF43Q68DV7 CCDC183-201ENST00000338005 1671 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Retrieved 100 of 98,524 protein–RNA pairs in 31.2 ms