Protein–RNA interactions for Protein: Q5TC12

ATPAF1, ATP synthase mitochondrial F1 complex assembly factor 1, humanhuman

Predicted RBP Predictions only

Length 328 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATPAF1Q5TC12 AC073957.2-201ENST00000549241 1562 ntTSL 4 BASIC14.04□□□□□ -0.16
ATPAF1Q5TC12 DDX55-201ENST00000238146 2654 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
ATPAF1Q5TC12 WDR53-201ENST00000332629 1679 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
ATPAF1Q5TC12 CCDC183-201ENST00000338005 1671 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
ATPAF1Q5TC12 MAGEA8-201ENST00000286482 1778 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
ATPAF1Q5TC12 ADRA1A-202ENST00000354550 1765 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
ATPAF1Q5TC12 MARCO-201ENST00000327097 1838 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
ATPAF1Q5TC12 FBXL12-208ENST00000589626 1920 ntTSL 2 BASIC14.03□□□□□ -0.16
ATPAF1Q5TC12 DDOST-206ENST00000602624 1963 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
ATPAF1Q5TC12 UBE3A-207ENST00000614096 8741 ntAPPRIS ALT1 TSL 1 (best) BASIC14.03□□□□□ -0.16
ATPAF1Q5TC12 AC023157.3-201ENST00000619086 2088 ntBASIC14.03□□□□□ -0.16
ATPAF1Q5TC12 DYSF-201ENST00000258104 6796 ntAPPRIS P3 TSL 1 (best) BASIC14.03□□□□□ -0.16
ATPAF1Q5TC12 DYSF-204ENST00000409582 6790 ntAPPRIS ALT2 TSL 1 (best) BASIC14.03□□□□□ -0.16
ATPAF1Q5TC12 DYSF-210ENST00000413539 6769 ntAPPRIS ALT2 TSL 1 (best) BASIC14.03□□□□□ -0.16
ATPAF1Q5TC12 JAKMIP1-204ENST00000409831 2371 ntAPPRIS P1 TSL 2 BASIC14.03□□□□□ -0.16
ATPAF1Q5TC12 CADPS2-205ENST00000449022 4073 ntTSL 5 BASIC14.03□□□□□ -0.16
ATPAF1Q5TC12 CNKSR1-202ENST00000374253 2538 ntAPPRIS ALT2 TSL 1 (best) BASIC14.03□□□□□ -0.16
ATPAF1Q5TC12 PITPNM1-202ENST00000436757 4216 ntAPPRIS ALT1 TSL 1 (best) BASIC14.03□□□□□ -0.16
ATPAF1Q5TC12 MYH14-204ENST00000440075 4247 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
ATPAF1Q5TC12 MIR137HG-202ENST00000424528 2639 ntTSL 2 BASIC14.03□□□□□ -0.16
ATPAF1Q5TC12 POM121-202ENST00000395270 7011 ntAPPRIS ALT2 TSL 1 (best) BASIC14.03□□□□□ -0.16
ATPAF1Q5TC12 RASA4-201ENST00000262940 5605 ntAPPRIS P3 TSL 1 (best) BASIC14.03□□□□□ -0.16
ATPAF1Q5TC12 SLC44A2-203ENST00000586078 3784 ntTSL 5 BASIC14.03□□□□□ -0.16
ATPAF1Q5TC12 FCN3-201ENST00000270879 1030 ntAPPRIS P4 TSL 1 (best) BASIC14.03□□□□□ -0.16
ATPAF1Q5TC12 KLHL7-201ENST00000322275 969 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
ATPAF1Q5TC12 FCN3-202ENST00000354982 997 ntAPPRIS ALT2 TSL 1 (best) BASIC14.03□□□□□ -0.16
ATPAF1Q5TC12 AC007967.2-201ENST00000432613 625 ntBASIC14.03□□□□□ -0.16
ATPAF1Q5TC12 DDIAS-202ENST00000524921 607 ntAPPRIS ALT2 TSL 4 BASIC14.03□□□□□ -0.16
ATPAF1Q5TC12 HOXD8-204ENST00000544999 1235 ntAPPRIS ALT2 TSL 5 BASIC14.03□□□□□ -0.16
ATPAF1Q5TC12 AC025162.1-201ENST00000554022 565 ntTSL 4 BASIC14.03□□□□□ -0.16
ATPAF1Q5TC12 AC023355.1-201ENST00000560323 752 ntTSL 3 BASIC14.03□□□□□ -0.16
ATPAF1Q5TC12 CYP2A7P1-201ENST00000595391 815 ntBASIC14.03□□□□□ -0.16
ATPAF1Q5TC12 AC097376.2-204ENST00000609359 627 ntTSL 2 BASIC14.03□□□□□ -0.16
ATPAF1Q5TC12 WT1-AS_2.1-201ENST00000613208 137 ntBASIC14.03□□□□□ -0.16
ATPAF1Q5TC12 HSP90B1-210ENST00000614327 1338 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
ATPAF1Q5TC12 CLDN6-201ENST00000328796 1369 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
ATPAF1Q5TC12 UBAC2-203ENST00000403766 1375 ntAPPRIS P1 TSL 2 BASIC14.03□□□□□ -0.16
ATPAF1Q5TC12 ALDOA-226ENST00000569798 1499 ntTSL 2 BASIC14.03□□□□□ -0.16
ATPAF1Q5TC12 LOH12CR2-201ENST00000381800 1540 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
ATPAF1Q5TC12 FUT2-201ENST00000391876 1593 ntAPPRIS P1 TSL 2 BASIC14.03□□□□□ -0.16
ATPAF1Q5TC12 BX276092.9-202ENST00000636096 1722 ntAPPRIS P5 TSL 5 BASIC14.03□□□□□ -0.16
ATPAF1Q5TC12 TLN1-201ENST00000314888 8823 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
ATPAF1Q5TC12 SSB-202ENST00000409333 1782 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
ATPAF1Q5TC12 HARS-204ENST00000438307 1789 ntTSL 2 BASIC14.03□□□□□ -0.16
ATPAF1Q5TC12 CDS2-203ENST00000460006 9298 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
ATPAF1Q5TC12 GPR89B-201ENST00000314163 1934 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
ATPAF1Q5TC12 CCDC116-203ENST00000607942 1913 ntAPPRIS ALT2 TSL 2 BASIC14.03□□□□□ -0.16
ATPAF1Q5TC12 PHLDA1-203ENST00000619060 5913 ntAPPRIS P2 TSL 1 (best) BASIC14.03□□□□□ -0.16
ATPAF1Q5TC12 TBC1D17-202ENST00000535102 2025 ntTSL 2 BASIC14.03□□□□□ -0.16
ATPAF1Q5TC12 SCAMP2-201ENST00000268099 2453 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
ATPAF1Q5TC12 ARHGAP9-203ENST00000424809 2569 ntTSL 2 BASIC14.03□□□□□ -0.16
ATPAF1Q5TC12 AC020659.1-201ENST00000309874 2900 ntTSL 2 BASIC14.03□□□□□ -0.16
ATPAF1Q5TC12 AIFM2-204ENST00000613322 3247 ntAPPRIS P1 TSL 5 BASIC14.03□□□□□ -0.16
ATPAF1Q5TC12 CCAR2-202ENST00000389279 3980 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
ATPAF1Q5TC12 TAOK3-201ENST00000392533 4384 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
ATPAF1Q5TC12 MGAT1-202ENST00000333055 8863 ntAPPRIS P1 TSL 2 BASIC14.02□□□□□ -0.16
ATPAF1Q5TC12 SIN3B-202ENST00000379803 5129 ntAPPRIS P3 TSL 1 (best) BASIC14.02□□□□□ -0.16
ATPAF1Q5TC12 MAP1S-201ENST00000324096 3419 ntAPPRIS P3 TSL 1 (best) BASIC14.02□□□□□ -0.16
ATPAF1Q5TC12 COL26A1-201ENST00000313669 3033 ntAPPRIS P2 TSL 1 (best) BASIC14.02□□□□□ -0.16
ATPAF1Q5TC12 TFAP2C-201ENST00000201031 2866 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
ATPAF1Q5TC12 MAP4K1-210ENST00000591517 2700 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
ATPAF1Q5TC12 UBAC2-202ENST00000376440 2525 ntTSL 2 BASIC14.02□□□□□ -0.16
ATPAF1Q5TC12 POFUT2-214ENST00000615172 2472 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
ATPAF1Q5TC12 ACOX3-202ENST00000413009 2374 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
ATPAF1Q5TC12 AL671710.1-201ENST00000610245 2349 ntBASIC14.02□□□□□ -0.16
ATPAF1Q5TC12 SNX5-202ENST00000377768 2288 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
ATPAF1Q5TC12 VTN-201ENST00000226218 2149 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
ATPAF1Q5TC12 RGS3-206ENST00000374136 2092 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
ATPAF1Q5TC12 SCAI-202ENST00000373549 1968 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
ATPAF1Q5TC12 DUS2-202ENST00000432752 1864 ntTSL 2 BASIC14.02□□□□□ -0.16
ATPAF1Q5TC12 HARS-203ENST00000431330 1774 ntTSL 2 BASIC14.02□□□□□ -0.16
ATPAF1Q5TC12 SPERT-201ENST00000310521 1613 ntAPPRIS P3 TSL 1 (best) BASIC14.02□□□□□ -0.16
ATPAF1Q5TC12 ACP5-203ENST00000433365 1397 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
ATPAF1Q5TC12 FGFBP2-201ENST00000259989 1168 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
ATPAF1Q5TC12 KRTCAP2-201ENST00000295682 552 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
ATPAF1Q5TC12 ICOSLG-201ENST00000344330 1009 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.17
ATPAF1Q5TC12 DNAJC4-203ENST00000355040 759 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
ATPAF1Q5TC12 MRPS16-201ENST00000372940 866 ntTSL 2 BASIC14.02□□□□□ -0.17
ATPAF1Q5TC12 SELENOH-201ENST00000388857 833 ntAPPRIS P2 TSL 1 (best) BASIC14.02□□□□□ -0.17
ATPAF1Q5TC12 AP000355.1-201ENST00000432032 480 ntTSL 5 BASIC14.02□□□□□ -0.17
ATPAF1Q5TC12 SMIM27-204ENST00000453396 1003 ntAPPRIS ALT2 TSL 3 BASIC14.02□□□□□ -0.17
ATPAF1Q5TC12 RPL28-209ENST00000560055 670 ntTSL 3 BASIC14.02□□□□□ -0.17
ATPAF1Q5TC12 SPATA33-208ENST00000568929 1264 ntAPPRIS ALT2 TSL 2 BASIC14.02□□□□□ -0.17
ATPAF1Q5TC12 ANAPC11-210ENST00000574924 722 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
ATPAF1Q5TC12 SIGLEC29P-201ENST00000599873 1114 ntBASIC14.02□□□□□ -0.17
ATPAF1Q5TC12 AC074135.2-201ENST00000600896 510 ntTSL 3 BASIC14.02□□□□□ -0.17
ATPAF1Q5TC12 AL590999.1-203ENST00000606829 542 ntTSL 4 BASIC14.02□□□□□ -0.17
ATPAF1Q5TC12 ZNF445-205ENST00000617032 1291 ntTSL 5 BASIC14.02□□□□□ -0.17
ATPAF1Q5TC12 AC004877.2-201ENST00000623941 599 ntBASIC14.02□□□□□ -0.17
ATPAF1Q5TC12 B3GAT1-201ENST00000312527 3652 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
ATPAF1Q5TC12 C18orf25-206ENST00000619301 5264 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
ATPAF1Q5TC12 RASA4B-207ENST00000541662 2794 ntAPPRIS P2 TSL 2 BASIC14.02□□□□□ -0.17
ATPAF1Q5TC12 LONP1-213ENST00000590729 2626 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
ATPAF1Q5TC12 USP27X-201ENST00000621775 2618 ntAPPRIS P1 BASIC14.02□□□□□ -0.17
ATPAF1Q5TC12 TOR4A-201ENST00000357503 4148 ntAPPRIS P1 TSL 2 BASIC14.02□□□□□ -0.17
ATPAF1Q5TC12 TTC28-AS1-219ENST00000454741 5064 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
ATPAF1Q5TC12 LCK-206ENST00000373564 2137 ntTSL 5 BASIC14.02□□□□□ -0.17
ATPAF1Q5TC12 SBF1-201ENST00000348911 6045 ntAPPRIS ALT2 TSL 5 BASIC14.02□□□□□ -0.17
ATPAF1Q5TC12 SRPK1-204ENST00000373825 4592 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
ATPAF1Q5TC12 USP4-201ENST00000265560 3126 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Retrieved 100 of 98,524 protein–RNA pairs in 37.6 ms