Protein–RNA interactions for Protein: Q59H18

TNNI3K, Serine/threonine-protein kinase TNNI3K, humanhuman

Predictions only

Length 835 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TNNI3KQ59H18 OARD1-216ENST00000628419 1188 ntTSL 5 BASIC19.53■□□□□ 0.72
TNNI3KQ59H18 SPDEF-202ENST00000544425 1866 ntAPPRIS ALT1 TSL 2 BASIC19.53■□□□□ 0.72
TNNI3KQ59H18 RRM2-202ENST00000360566 3673 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
TNNI3KQ59H18 CERNA1-202ENST00000560518 1972 ntTSL 2 BASIC19.53■□□□□ 0.72
TNNI3KQ59H18 PLPPR5-202ENST00000370188 4139 ntAPPRIS ALT1 TSL 1 (best) BASIC19.53■□□□□ 0.72
TNNI3KQ59H18 PIPOX-201ENST00000323372 2414 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
TNNI3KQ59H18 LRRC57-204ENST00000563454 2407 ntAPPRIS P1 TSL 2 BASIC19.53■□□□□ 0.72
TNNI3KQ59H18 LAT-202ENST00000360872 1459 ntAPPRIS P3 TSL 2 BASIC19.53■□□□□ 0.72
TNNI3KQ59H18 ULK3-201ENST00000440863 2623 ntAPPRIS P3 TSL 2 BASIC19.53■□□□□ 0.72
TNNI3KQ59H18 DMAC2-201ENST00000221943 1692 ntAPPRIS P1 TSL 2 BASIC19.52■□□□□ 0.72
TNNI3KQ59H18 CYB5R1-201ENST00000367249 1651 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
TNNI3KQ59H18 CCT7-216ENST00000540468 1674 ntTSL 2 BASIC19.52■□□□□ 0.72
TNNI3KQ59H18 ACY3-201ENST00000255082 1300 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
TNNI3KQ59H18 ACE-203ENST00000413513 2237 ntTSL 2 BASIC19.52■□□□□ 0.72
TNNI3KQ59H18 LMF1-AS1-202ENST00000569574 1408 ntTSL 3 BASIC19.52■□□□□ 0.72
TNNI3KQ59H18 CRH-201ENST00000276571 1543 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
TNNI3KQ59H18 IDH3B-201ENST00000380843 1545 ntAPPRIS P4 TSL 1 (best) BASIC19.52■□□□□ 0.72
TNNI3KQ59H18 LTA-214ENST00000454783 1507 ntAPPRIS P1 TSL 2 BASIC19.52■□□□□ 0.72
TNNI3KQ59H18 PDE6G-204ENST00000573076 1505 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
TNNI3KQ59H18 C3orf58-201ENST00000315691 4346 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
TNNI3KQ59H18 CNGA3-205ENST00000436404 2504 ntAPPRIS ALT2 TSL 1 (best) BASIC19.52■□□□□ 0.72
TNNI3KQ59H18 CLN3-201ENST00000333496 1608 ntTSL 5 BASIC19.52■□□□□ 0.72
TNNI3KQ59H18 ZNF470-201ENST00000330619 7151 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
TNNI3KQ59H18 CCDC182-201ENST00000299415 832 ntAPPRIS P1 BASIC19.52■□□□□ 0.72
TNNI3KQ59H18 CALY-203ENST00000368558 825 ntTSL 5 BASIC19.52■□□□□ 0.72
TNNI3KQ59H18 AL033519.3-201ENST00000450618 595 ntTSL 5 BASIC19.52■□□□□ 0.72
TNNI3KQ59H18 AL589987.1-201ENST00000453380 819 ntBASIC19.52■□□□□ 0.72
TNNI3KQ59H18 TMEM44-AS1-203ENST00000453671 1119 ntTSL 2 BASIC19.52■□□□□ 0.72
TNNI3KQ59H18 AC133919.2-202ENST00000563515 416 ntTSL 3 BASIC19.52■□□□□ 0.72
TNNI3KQ59H18 ARL16-202ENST00000570561 768 ntTSL 2 BASIC19.52■□□□□ 0.72
TNNI3KQ59H18 ZNF586-205ENST00000598885 578 ntTSL 4 BASIC19.52■□□□□ 0.72
TNNI3KQ59H18 LINC01115-203ENST00000606068 577 ntBASIC19.52■□□□□ 0.72
TNNI3KQ59H18 5S_rRNA.22-201ENST00000614916 106 ntBASIC19.52■□□□□ 0.72
TNNI3KQ59H18 ABHD11-201ENST00000222800 1483 ntAPPRIS P3 TSL 1 (best) BASIC19.52■□□□□ 0.72
TNNI3KQ59H18 TRIM9-202ENST00000338969 3312 ntTSL 2 BASIC19.52■□□□□ 0.72
TNNI3KQ59H18 COLEC11-209ENST00000418971 1595 ntTSL 2 BASIC19.52■□□□□ 0.71
TNNI3KQ59H18 ROR2-202ENST00000375715 2993 ntTSL 1 (best) BASIC19.52■□□□□ 0.71
TNNI3KQ59H18 KLC4-202ENST00000347162 2404 ntAPPRIS ALT2 TSL 1 (best) BASIC19.52■□□□□ 0.71
TNNI3KQ59H18 AC012485.3-201ENST00000637634 2424 ntTSL 5 BASIC19.52■□□□□ 0.71
TNNI3KQ59H18 KBTBD11-201ENST00000320248 6710 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.71
TNNI3KQ59H18 NFIC-202ENST00000395111 1755 ntTSL 2 BASIC19.52■□□□□ 0.71
TNNI3KQ59H18 PRSS54-204ENST00000567164 1799 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.71
TNNI3KQ59H18 MAPT-215ENST00000574436 1326 ntAPPRIS ALT2 TSL 5 BASIC19.51■□□□□ 0.71
TNNI3KQ59H18 LZTS3-203ENST00000360342 4055 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
TNNI3KQ59H18 CDKN1A-203ENST00000405375 2267 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
TNNI3KQ59H18 SPAST-202ENST00000345662 5116 ntAPPRIS ALT1 TSL 1 (best) BASIC19.51■□□□□ 0.71
TNNI3KQ59H18 PRRT4-201ENST00000446477 3544 ntAPPRIS P1 TSL 5 BASIC19.51■□□□□ 0.71
TNNI3KQ59H18 PIP4K2C-207ENST00000550465 1532 ntTSL 2 BASIC19.51■□□□□ 0.71
TNNI3KQ59H18 SNHG22-201ENST00000589499 1615 ntTSL 2 BASIC19.51■□□□□ 0.71
TNNI3KQ59H18 AP000253.1-201ENST00000449339 2233 ntTSL 3 BASIC19.51■□□□□ 0.71
TNNI3KQ59H18 MAP4K3-201ENST00000263881 4362 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
TNNI3KQ59H18 SYBU-231ENST00000533065 2645 ntAPPRIS ALT2 TSL 2 BASIC19.51■□□□□ 0.71
TNNI3KQ59H18 TXNDC11-201ENST00000283033 3140 ntAPPRIS P3 TSL 2 BASIC19.51■□□□□ 0.71
TNNI3KQ59H18 POMT1-208ENST00000423007 3320 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
TNNI3KQ59H18 SYCE1-202ENST00000343131 1113 ntAPPRIS ALT2 TSL 1 (best) BASIC19.51■□□□□ 0.71
TNNI3KQ59H18 ADM2-201ENST00000395737 535 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
TNNI3KQ59H18 ZFAND2B-212ENST00000444522 1199 ntAPPRIS P1 TSL 5 BASIC19.51■□□□□ 0.71
TNNI3KQ59H18 RBAKDN-201ENST00000498308 514 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
TNNI3KQ59H18 AC055854.1-201ENST00000523627 570 ntTSL 4 BASIC19.51■□□□□ 0.71
TNNI3KQ59H18 C1QTNF1-212ENST00000583904 1129 ntAPPRIS P1 TSL 4 BASIC19.51■□□□□ 0.71
TNNI3KQ59H18 AC010507.1-202ENST00000633286 381 ntTSL 3 BASIC19.51■□□□□ 0.71
TNNI3KQ59H18 NFIC-201ENST00000341919 1573 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
TNNI3KQ59H18 C1orf43-202ENST00000362076 1551 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
TNNI3KQ59H18 AL607033.1-201ENST00000623900 1599 ntBASIC19.51■□□□□ 0.71
TNNI3KQ59H18 LMNA-203ENST00000368297 1679 ntTSL 2 BASIC19.51■□□□□ 0.71
TNNI3KQ59H18 SURF4-207ENST00000545297 2863 ntTSL 2 BASIC19.51■□□□□ 0.71
TNNI3KQ59H18 FRA10AC1-201ENST00000359204 3089 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
TNNI3KQ59H18 TRAPPC11-201ENST00000334690 4552 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
TNNI3KQ59H18 SCRIB-203ENST00000377533 5108 ntAPPRIS ALT2 TSL 1 (best) BASIC19.51■□□□□ 0.71
TNNI3KQ59H18 CARNS1-201ENST00000307823 3942 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
TNNI3KQ59H18 TTC34-201ENST00000401095 8814 ntAPPRIS ALT2 TSL 5 BASIC19.51■□□□□ 0.71
TNNI3KQ59H18 AHSA1-201ENST00000216479 1402 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
TNNI3KQ59H18 TOM1-201ENST00000382034 1300 ntTSL 5 BASIC19.51■□□□□ 0.71
TNNI3KQ59H18 GLUD2-201ENST00000328078 2493 ntAPPRIS P1 BASIC19.5■□□□□ 0.71
TNNI3KQ59H18 SLC6A2-209ENST00000568943 2471 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
TNNI3KQ59H18 TMC7-201ENST00000304381 3640 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
TNNI3KQ59H18 H2BFM-201ENST00000355016 1882 ntAPPRIS P1 TSL 2 BASIC19.5■□□□□ 0.71
TNNI3KQ59H18 PLIN1-202ENST00000430628 2900 ntAPPRIS P1 TSL 5 BASIC19.5■□□□□ 0.71
TNNI3KQ59H18 GPR176-205ENST00000561100 2816 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
TNNI3KQ59H18 SYT3-202ENST00000593901 2836 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
TNNI3KQ59H18 TMEM53-204ENST00000372243 1579 ntTSL 2 BASIC19.5■□□□□ 0.71
TNNI3KQ59H18 ELL2-201ENST00000237853 6046 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
TNNI3KQ59H18 PRR18-201ENST00000322583 3084 ntAPPRIS P2 BASIC19.5■□□□□ 0.71
TNNI3KQ59H18 ISCA1-201ENST00000311534 813 ntTSL 2 BASIC19.5■□□□□ 0.71
TNNI3KQ59H18 DIRC3-201ENST00000423123 552 ntAPPRIS P1 TSL 4 BASIC19.5■□□□□ 0.71
TNNI3KQ59H18 LINC00229-201ENST00000443783 500 ntTSL 2 BASIC19.5■□□□□ 0.71
TNNI3KQ59H18 DCUN1D5-209ENST00000531543 1030 ntTSL 5 BASIC19.5■□□□□ 0.71
TNNI3KQ59H18 AC084125.2-203ENST00000532766 821 ntTSL 3 BASIC19.5■□□□□ 0.71
TNNI3KQ59H18 AP000943.3-201ENST00000536540 954 ntTSL 3 BASIC19.5■□□□□ 0.71
TNNI3KQ59H18 MIR4313-201ENST00000580760 101 ntBASIC19.5■□□□□ 0.71
TNNI3KQ59H18 AC138761.1-201ENST00000584393 385 ntBASIC19.5■□□□□ 0.71
TNNI3KQ59H18 AURKB-214ENST00000585124 1227 ntAPPRIS P3 TSL 1 (best) BASIC19.5■□□□□ 0.71
TNNI3KQ59H18 SRD5A3P1-201ENST00000603021 949 ntBASIC19.5■□□□□ 0.71
TNNI3KQ59H18 CREB3L2-208ENST00000620715 1053 ntTSL 5 BASIC19.5■□□□□ 0.71
TNNI3KQ59H18 SFT2D2-204ENST00000630869 1073 ntTSL 4 BASIC19.5■□□□□ 0.71
TNNI3KQ59H18 VPS37C-201ENST00000301765 2865 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
TNNI3KQ59H18 FEN1-201ENST00000305885 2296 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
TNNI3KQ59H18 MAPKAPK5-207ENST00000551404 1630 ntAPPRIS P4 TSL 5 BASIC19.5■□□□□ 0.71
TNNI3KQ59H18 PRKD2-216ENST00000601806 2906 ntAPPRIS ALT2 TSL 5 BASIC19.5■□□□□ 0.71
TNNI3KQ59H18 MBD1-207ENST00000398488 1512 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
Retrieved 100 of 98,524 protein–RNA pairs in 79.6 ms