Protein–RNA interactions for Protein: Q33E94

RFX4, Transcription factor RFX4, humanhuman

Predictions only

Length 735 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFX4Q33E94 Z97056.1-201ENST00000433230 556 ntTSL 2 BASIC15.03■□□□□ -0
RFX4Q33E94 TM4SF19-TCTEX1D2-201ENST00000442633 964 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
RFX4Q33E94 TSTD3-201ENST00000452647 962 ntAPPRIS P2 TSL 2 BASIC15.03■□□□□ -0
RFX4Q33E94 AC105202.1-201ENST00000517833 995 ntTSL 3 BASIC15.03■□□□□ -0
RFX4Q33E94 CMTM1-213ENST00000529506 581 ntAPPRIS ALT2 TSL 1 (best) BASIC15.03■□□□□ -0
RFX4Q33E94 RAB6A-207ENST00000541588 758 ntTSL 1 (best) BASIC15.03■□□□□ -0
RFX4Q33E94 TRAF7-205ENST00000567653 666 ntTSL 2 BASIC15.03■□□□□ -0
RFX4Q33E94 ORMDL3-204ENST00000579695 2106 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
RFX4Q33E94 AC006557.2-201ENST00000592985 1240 ntBASIC15.03■□□□□ -0
RFX4Q33E94 AC011455.1-201ENST00000593830 504 ntTSL 3 BASIC15.03■□□□□ -0
RFX4Q33E94 AC025062.2-201ENST00000605477 670 ntBASIC15.03■□□□□ -0
RFX4Q33E94 BSG-214ENST00000614867 960 ntTSL 3 BASIC15.03■□□□□ -0
RFX4Q33E94 REXO1L6P-202ENST00000619970 1078 ntBASIC15.03■□□□□ -0
RFX4Q33E94 RGS3-206ENST00000374136 2092 ntTSL 1 (best) BASIC15.03■□□□□ -0
RFX4Q33E94 SEMA5B-201ENST00000195173 4523 ntAPPRIS ALT2 TSL 5 BASIC15.03■□□□□ -0
RFX4Q33E94 CAMK2D-205ENST00000394524 5294 ntAPPRIS ALT1 TSL 2 BASIC15.03■□□□□ -0
RFX4Q33E94 API5-202ENST00000420461 2009 ntTSL 2 BASIC15.03■□□□□ -0
RFX4Q33E94 TMEM189-203ENST00000371656 1973 ntTSL 2 BASIC15.03■□□□□ -0
RFX4Q33E94 CELF4-223ENST00000603232 1906 ntAPPRIS ALT1 TSL 1 (best) BASIC15.03■□□□□ -0
RFX4Q33E94 FKRP-201ENST00000318584 3332 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
RFX4Q33E94 FAM49B-202ENST00000517654 1817 ntAPPRIS P1 TSL 5 BASIC15.03■□□□□ -0
RFX4Q33E94 AP1M2-207ENST00000590923 1757 ntAPPRIS ALT1 TSL 1 (best) BASIC15.03■□□□□ -0
RFX4Q33E94 XPO6-201ENST00000304658 4422 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
RFX4Q33E94 NCK2-203ENST00000393349 2371 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
RFX4Q33E94 TIPRL-202ENST00000367833 3032 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
RFX4Q33E94 PPOX-201ENST00000352210 1686 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
RFX4Q33E94 SFRP4-201ENST00000436072 2966 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
RFX4Q33E94 ETV5-206ENST00000434744 2213 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
RFX4Q33E94 RAB7A-203ENST00000482525 1589 ntTSL 1 (best) BASIC15.02■□□□□ -0
RFX4Q33E94 CBX7-201ENST00000216133 4081 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
RFX4Q33E94 USP19-203ENST00000398892 4622 ntAPPRIS ALT2 TSL 5 BASIC15.02■□□□□ -0
RFX4Q33E94 SMIM10-201ENST00000330288 1536 ntAPPRIS P1 BASIC15.02■□□□□ -0
RFX4Q33E94 TSR2-201ENST00000375151 1534 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
RFX4Q33E94 EIF4G1-212ENST00000424196 5653 ntTSL 2 BASIC15.02■□□□□ -0
RFX4Q33E94 AC138904.3-201ENST00000635780 2681 ntTSL 5 BASIC15.02■□□□□ -0
RFX4Q33E94 DEPDC7-202ENST00000311388 2012 ntTSL 1 (best) BASIC15.02■□□□□ -0
RFX4Q33E94 MLPH-203ENST00000409373 2031 ntTSL 1 (best) BASIC15.02■□□□□ -0
RFX4Q33E94 LINC00996-201ENST00000477392 2043 ntTSL 1 (best) BASIC15.02■□□□□ -0
RFX4Q33E94 DMKN-209ENST00000429837 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC15.02■□□□□ -0
RFX4Q33E94 TUBB8-201ENST00000561967 1413 ntTSL 5 BASIC15.02■□□□□ -0
RFX4Q33E94 PPP1R18-206ENST00000615892 1448 ntTSL 1 (best) BASIC15.02■□□□□ -0
RFX4Q33E94 CRHR2-208ENST00000506074 3109 ntTSL 1 (best) BASIC15.02■□□□□ -0
RFX4Q33E94 POR-201ENST00000394893 2532 ntTSL 5 BASIC15.02■□□□□ -0
RFX4Q33E94 MTA2-201ENST00000278823 3058 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
RFX4Q33E94 TSNARE1-201ENST00000307180 1907 ntAPPRIS ALT2 TSL 5 BASIC15.02■□□□□ -0
RFX4Q33E94 GOLGA5-201ENST00000163416 2969 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
RFX4Q33E94 TVP23C-210ENST00000584811 2989 ntTSL 1 (best) BASIC15.02■□□□□ -0
RFX4Q33E94 TPO-203ENST00000346956 2923 ntTSL 5 BASIC15.02■□□□□ -0
RFX4Q33E94 BICD1-205ENST00000550207 1328 ntTSL 3 BASIC15.02■□□□□ -0
RFX4Q33E94 FLI1-207ENST00000534087 3859 ntTSL 2 BASIC15.02■□□□□ -0
RFX4Q33E94 LENG8-209ENST00000616932 2825 ntAPPRIS ALT2 TSL 5 BASIC15.02■□□□□ -0
RFX4Q33E94 PPIB-201ENST00000300026 1081 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
RFX4Q33E94 PTRHD1-201ENST00000328379 1105 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
RFX4Q33E94 ZFAND4-203ENST00000374366 3821 ntTSL 1 (best) BASIC15.02■□□□□ -0
RFX4Q33E94 ELK2BP-201ENST00000415014 1224 ntBASIC15.02■□□□□ -0
RFX4Q33E94 HCG4-201ENST00000418983 998 ntBASIC15.02■□□□□ -0
RFX4Q33E94 LAGE3P1-201ENST00000425356 484 ntBASIC15.02■□□□□ -0
RFX4Q33E94 EEF1E1-205ENST00000507463 654 ntTSL 2 BASIC15.02■□□□□ -0
RFX4Q33E94 AC107918.2-201ENST00000530817 355 ntBASIC15.02■□□□□ -0
RFX4Q33E94 AC021087.4-201ENST00000563761 564 ntBASIC15.02■□□□□ -0
RFX4Q33E94 NBPF14-202ENST00000593495 1082 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
RFX4Q33E94 GGTLC5P-201ENST00000617623 998 ntBASIC15.02■□□□□ -0
RFX4Q33E94 AC244517.11-201ENST00000624192 573 ntTSL 5 BASIC15.02■□□□□ -0
RFX4Q33E94 TGOLN2-203ENST00000398263 6138 ntAPPRIS ALT2 TSL 1 (best) BASIC15.02□□□□□ -0.01
RFX4Q33E94 TMEM50A-201ENST00000374358 2683 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
RFX4Q33E94 SPHK2-210ENST00000599748 2683 ntAPPRIS ALT2 TSL 1 (best) BASIC15.02□□□□□ -0.01
RFX4Q33E94 NDRG2-202ENST00000298687 2122 ntAPPRIS P4 TSL 1 (best) BASIC15.02□□□□□ -0.01
RFX4Q33E94 DCAKD-201ENST00000310604 2122 ntAPPRIS P1 TSL 5 BASIC15.02□□□□□ -0.01
RFX4Q33E94 UNC13B-201ENST00000378495 6303 ntAPPRIS P3 TSL 1 (best) BASIC15.02□□□□□ -0.01
RFX4Q33E94 C3-201ENST00000245907 5263 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
RFX4Q33E94 PCYOX1-201ENST00000264441 2959 ntTSL 5 BASIC15.02□□□□□ -0.01
RFX4Q33E94 C12orf49-201ENST00000261318 8404 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
RFX4Q33E94 RGPD5-202ENST00000272454 2907 ntTSL 2 BASIC15.02□□□□□ -0.01
RFX4Q33E94 C1orf43-202ENST00000362076 1551 ntTSL 1 (best) BASIC15.02□□□□□ -0.01
RFX4Q33E94 TBC1D1-203ENST00000402522 1567 ntTSL 2 BASIC15.02□□□□□ -0.01
RFX4Q33E94 LINC00894-202ENST00000425602 1597 ntTSL 2 BASIC15.02□□□□□ -0.01
RFX4Q33E94 AP1M1-202ENST00000429941 1578 ntTSL 2 BASIC15.02□□□□□ -0.01
RFX4Q33E94 FBXO45-202ENST00000440469 3689 ntTSL 2 BASIC15.02□□□□□ -0.01
RFX4Q33E94 MARVELD1-201ENST00000285605 3221 ntAPPRIS P1 TSL 2 BASIC15.02□□□□□ -0.01
RFX4Q33E94 AC011477.6-201ENST00000604980 1927 ntBASIC15.02□□□□□ -0.01
RFX4Q33E94 USP25-201ENST00000285679 3973 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
RFX4Q33E94 SLC30A5-209ENST00000621204 3999 ntTSL 5 BASIC15.01□□□□□ -0.01
RFX4Q33E94 CFAP53-201ENST00000398545 1851 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
RFX4Q33E94 SEMA4C-201ENST00000305476 3545 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
RFX4Q33E94 OPA1-203ENST00000361715 6384 ntTSL 5 BASIC15.01□□□□□ -0.01
RFX4Q33E94 CCDC50-201ENST00000392455 8429 ntAPPRIS ALT1 TSL 1 (best) BASIC15.01□□□□□ -0.01
RFX4Q33E94 RIPK1-201ENST00000259808 4160 ntAPPRIS P1 TSL 5 BASIC15.01□□□□□ -0.01
RFX4Q33E94 UNC5C-202ENST00000504962 1789 ntTSL 2 BASIC15.01□□□□□ -0.01
RFX4Q33E94 CTXND1-201ENST00000560778 6890 ntAPPRIS P1 TSL 3 BASIC15.01□□□□□ -0.01
RFX4Q33E94 IRF8-203ENST00000563180 1394 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
RFX4Q33E94 TEX13A-201ENST00000600991 1377 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
RFX4Q33E94 PCK2-203ENST00000545054 2505 ntTSL 2 BASIC15.01□□□□□ -0.01
RFX4Q33E94 AP003680.1-201ENST00000598970 3660 ntBASIC15.01□□□□□ -0.01
RFX4Q33E94 FBXW9-201ENST00000393261 1738 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
RFX4Q33E94 SLC47A1-203ENST00000436810 1719 ntTSL 2 BASIC15.01□□□□□ -0.01
RFX4Q33E94 STARD3NL-204ENST00000434197 1341 ntTSL 5 BASIC15.01□□□□□ -0.01
RFX4Q33E94 IGLL5-203ENST00000532223 1335 ntAPPRIS ALT2 TSL 1 (best) BASIC15.01□□□□□ -0.01
RFX4Q33E94 NDRG2-206ENST00000397844 2096 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
RFX4Q33E94 TEAD4-202ENST00000359864 1690 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
RFX4Q33E94 EVA1C-202ENST00000382699 1668 ntAPPRIS ALT1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Retrieved 100 of 98,524 protein–RNA pairs in 54.5 ms