Protein–RNA interactions for Protein: P78539

SRPX, Sushi repeat-containing protein SRPX, humanhuman

Predictions only

Length 464 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SRPXP78539 ISCA2-204ENST00000556816 2626 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
SRPXP78539 LONP1-213ENST00000590729 2626 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
SRPXP78539 BMP4-201ENST00000245451 1917 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
SRPXP78539 TSNARE1-201ENST00000307180 1907 ntAPPRIS ALT2 TSL 5 BASIC13.31□□□□□ -0.28
SRPXP78539 EXOC6B-202ENST00000410104 5795 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
SRPXP78539 SGK2-206ENST00000423407 1915 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
SRPXP78539 KIF7-201ENST00000394412 4551 ntAPPRIS P1 TSL 5 BASIC13.31□□□□□ -0.28
SRPXP78539 AP000704.1-201ENST00000637940 2182 ntTSL 5 BASIC13.31□□□□□ -0.28
SRPXP78539 TCAF2P1-201ENST00000291129 2421 ntBASIC13.31□□□□□ -0.28
SRPXP78539 AP001282.1-201ENST00000531301 1499 ntBASIC13.31□□□□□ -0.28
SRPXP78539 MAGEA2B-202ENST00000370293 1714 ntAPPRIS P1 TSL 2 BASIC13.31□□□□□ -0.28
SRPXP78539 FAM84B-201ENST00000304916 5404 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
SRPXP78539 PRKAG3-206ENST00000529249 2222 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
SRPXP78539 NOTCH4-201ENST00000375023 6745 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
SRPXP78539 TIPRL-202ENST00000367833 3032 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
SRPXP78539 CICP13-201ENST00000422015 2789 ntBASIC13.31□□□□□ -0.28
SRPXP78539 TBC1D3P5-202ENST00000581469 2513 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
SRPXP78539 STAT6-225ENST00000640254 2037 ntTSL 5 BASIC13.31□□□□□ -0.28
SRPXP78539 RPS5-202ENST00000596046 1520 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
SRPXP78539 SLC4A3-202ENST00000317151 4069 ntAPPRIS P1 TSL 5 BASIC13.31□□□□□ -0.28
SRPXP78539 SIT1-201ENST00000259608 1231 ntAPPRIS P2 TSL 1 (best) BASIC13.31□□□□□ -0.28
SRPXP78539 CGB7-201ENST00000377280 918 ntAPPRIS P1 TSL 3 BASIC13.31□□□□□ -0.28
SRPXP78539 CD99-202ENST00000381180 530 ntTSL 2 BASIC13.31□□□□□ -0.28
SRPXP78539 ITM2C-204ENST00000409704 1106 ntTSL 5 BASIC13.31□□□□□ -0.28
SRPXP78539 HAGLR-204ENST00000425005 623 ntTSL 3 BASIC13.31□□□□□ -0.28
SRPXP78539 AP006284.1-202ENST00000527113 527 ntTSL 4 BASIC13.31□□□□□ -0.28
SRPXP78539 NR2C2AP-204ENST00000538165 891 ntTSL 2 BASIC13.31□□□□□ -0.28
SRPXP78539 BLOC1S1-204ENST00000549147 1229 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
SRPXP78539 AQP4-AS1-204ENST00000582605 525 ntTSL 4 BASIC13.31□□□□□ -0.28
SRPXP78539 ANKRD29-202ENST00000585908 846 ntTSL 2 BASIC13.31□□□□□ -0.28
SRPXP78539 NDUFA6-204ENST00000617763 1183 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
SRPXP78539 SPINK2-207ENST00000631082 392 ntTSL 5 BASIC13.31□□□□□ -0.28
SRPXP78539 MAP3K8-201ENST00000263056 3096 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
SRPXP78539 RBM14-201ENST00000310137 2828 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
SRPXP78539 EEF1A1-202ENST00000316292 4441 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
SRPXP78539 TFAP2C-201ENST00000201031 2866 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
SRPXP78539 ITGB7-201ENST00000267082 2867 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
SRPXP78539 TBC1D1-203ENST00000402522 1567 ntTSL 2 BASIC13.31□□□□□ -0.28
SRPXP78539 SUSD5-201ENST00000309558 5008 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
SRPXP78539 CYP4F11-203ENST00000402119 3161 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
SRPXP78539 TBCD-202ENST00000539345 3975 ntTSL 5 BASIC13.31□□□□□ -0.28
SRPXP78539 KCNMA1-262ENST00000639489 4302 ntAPPRIS ALT2 TSL 5 BASIC13.31□□□□□ -0.28
SRPXP78539 SLC38A11-202ENST00000409058 1647 ntAPPRIS ALT2 TSL 5 BASIC13.31□□□□□ -0.28
SRPXP78539 SDCBP-201ENST00000260130 2167 ntAPPRIS P3 TSL 1 (best) BASIC13.31□□□□□ -0.28
SRPXP78539 AC009242.1-201ENST00000634300 2706 ntTSL 5 BASIC13.31□□□□□ -0.28
SRPXP78539 ZFAND4-203ENST00000374366 3821 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
SRPXP78539 MAIP1-202ENST00000392290 1386 ntAPPRIS P2 TSL 1 (best) BASIC13.31□□□□□ -0.28
SRPXP78539 PGR-210ENST00000619228 3038 ntTSL 5 BASIC13.31□□□□□ -0.28
SRPXP78539 IRF5-215ENST00000619830 1652 ntTSL 2 BASIC13.31□□□□□ -0.28
SRPXP78539 KIF3C-201ENST00000264712 5344 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
SRPXP78539 LRFN1-201ENST00000248668 3381 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
SRPXP78539 MROH1-209ENST00000534366 5092 ntAPPRIS ALT2 TSL 1 (best) BASIC13.31□□□□□ -0.28
SRPXP78539 GDF2-201ENST00000581492 1955 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
SRPXP78539 USP25-201ENST00000285679 3973 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
SRPXP78539 SHISA2-201ENST00000319420 2860 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
SRPXP78539 UBE3A-204ENST00000438097 8939 ntAPPRIS P3 TSL 5 BASIC13.3□□□□□ -0.28
SRPXP78539 CLCN2-202ENST00000344937 3187 ntAPPRIS ALT2 TSL 1 (best) BASIC13.3□□□□□ -0.28
SRPXP78539 SFRP2-201ENST00000274063 2032 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
SRPXP78539 LINC00996-201ENST00000477392 2043 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
SRPXP78539 MPPED2-202ENST00000448418 5591 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
SRPXP78539 BABAM1-201ENST00000359435 1472 ntAPPRIS P3 TSL 1 (best) BASIC13.3□□□□□ -0.28
SRPXP78539 UNC5C-202ENST00000504962 1789 ntTSL 2 BASIC13.3□□□□□ -0.28
SRPXP78539 REPIN1-201ENST00000397281 3292 ntAPPRIS P3 TSL 2 BASIC13.3□□□□□ -0.28
SRPXP78539 DDX17-202ENST00000396821 4791 ntAPPRIS ALT2 TSL 1 (best) BASIC13.3□□□□□ -0.28
SRPXP78539 COL26A1-201ENST00000313669 3033 ntAPPRIS P2 TSL 1 (best) BASIC13.3□□□□□ -0.28
SRPXP78539 ANKMY1-203ENST00000373318 2449 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
SRPXP78539 MECR-202ENST00000373791 2416 ntTSL 2 BASIC13.3□□□□□ -0.28
SRPXP78539 AC012569.1-201ENST00000591191 1524 ntBASIC13.3□□□□□ -0.28
SRPXP78539 TNFSF8-203ENST00000618336 1523 ntTSL 3 BASIC13.3□□□□□ -0.28
SRPXP78539 POM121C-206ENST00000607367 3690 ntAPPRIS ALT2 TSL 5 BASIC13.3□□□□□ -0.28
SRPXP78539 PAK1-210ENST00000528203 1878 ntTSL 2 BASIC13.3□□□□□ -0.28
SRPXP78539 CCDC90B-202ENST00000455220 1550 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
SRPXP78539 STRA8-201ENST00000275764 993 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
SRPXP78539 MCRIP2-201ENST00000307650 946 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
SRPXP78539 SSNA1-201ENST00000322310 896 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
SRPXP78539 NRN1L-201ENST00000339176 710 ntAPPRIS P2 TSL 1 (best) BASIC13.3□□□□□ -0.28
SRPXP78539 GBGT1-201ENST00000372036 871 ntTSL 3 BASIC13.3□□□□□ -0.28
SRPXP78539 TIMM17B-202ENST00000396779 1099 ntTSL 5 BASIC13.3□□□□□ -0.28
SRPXP78539 C1orf226-202ENST00000426197 1049 ntAPPRIS P3 TSL 2 BASIC13.3□□□□□ -0.28
SRPXP78539 SNHG17-206ENST00000436764 973 ntTSL 5 BASIC13.3□□□□□ -0.28
SRPXP78539 SGO1-208ENST00000437051 1187 ntAPPRIS ALT2 TSL 1 (best) BASIC13.3□□□□□ -0.28
SRPXP78539 TRPC2-202ENST00000526541 1189 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
SRPXP78539 PPOX-219ENST00000544598 813 ntTSL 2 BASIC13.3□□□□□ -0.28
SRPXP78539 LINC00596-201ENST00000559615 937 ntTSL 5 BASIC13.3□□□□□ -0.28
SRPXP78539 BLOC1S6-214ENST00000567461 1052 ntTSL 2 BASIC13.3□□□□□ -0.28
SRPXP78539 CR381653.1-203ENST00000625153 577 ntTSL 5 BASIC13.3□□□□□ -0.28
SRPXP78539 DGKI-201ENST00000288490 3895 ntAPPRIS P3 TSL 5 BASIC13.3□□□□□ -0.28
SRPXP78539 CNKSR1-201ENST00000361530 2625 ntAPPRIS P3 TSL 1 (best) BASIC13.3□□□□□ -0.28
SRPXP78539 AC100803.3-201ENST00000606664 2961 ntTSL 5 BASIC13.3□□□□□ -0.28
SRPXP78539 GOLGA2P10-204ENST00000618004 1349 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
SRPXP78539 M6PR-202ENST00000536844 2305 ntTSL 3 BASIC13.3□□□□□ -0.28
SRPXP78539 SERPINA3-203ENST00000467132 2660 ntAPPRIS P1 TSL 2 BASIC13.3□□□□□ -0.28
SRPXP78539 KBTBD12-202ENST00000405109 5727 ntAPPRIS P1 TSL 5 BASIC13.3□□□□□ -0.28
SRPXP78539 LINGO1-201ENST00000355300 3055 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
SRPXP78539 RGS11-203ENST00000359740 1371 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
SRPXP78539 SEPT9-211ENST00000585930 1387 ntTSL 2 BASIC13.3□□□□□ -0.28
SRPXP78539 MFNG-201ENST00000356998 2088 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
SRPXP78539 ITSN2-203ENST00000406921 4563 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
SRPXP78539 TULP2-201ENST00000221399 1754 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
SRPXP78539 ARFIP2-203ENST00000423813 1430 ntTSL 2 BASIC13.3□□□□□ -0.28
Retrieved 100 of 98,524 protein–RNA pairs in 75.9 ms