Protein–RNA interactions for Protein: P78406

RAE1, mRNA export factor, humanhuman

Known RBP Predictions only

Length 368 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAE1P78406 CORO6-201ENST00000345068 2603 ntAPPRIS P2 TSL 5 BASIC15.23■□□□□ 0.03
RAE1P78406 ATP6AP2-226ENST00000637526 1862 ntAPPRIS ALT2 TSL 5 BASIC15.23■□□□□ 0.03
RAE1P78406 ASIC1-201ENST00000228468 4072 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
RAE1P78406 RAB31-207ENST00000578921 4055 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
RAE1P78406 SLC9A7P1-201ENST00000554295 3311 ntBASIC15.23■□□□□ 0.03
RAE1P78406 ABHD11-201ENST00000222800 1483 ntAPPRIS P3 TSL 1 (best) BASIC15.23■□□□□ 0.03
RAE1P78406 CIAPIN1-207ENST00000565961 1814 ntTSL 3 BASIC15.23■□□□□ 0.03
RAE1P78406 LCN2-203ENST00000373017 848 ntAPPRIS P2 TSL 5 BASIC15.23■□□□□ 0.03
RAE1P78406 CD81-202ENST00000381036 880 ntTSL 3 BASIC15.23■□□□□ 0.03
RAE1P78406 MRPL28-202ENST00000389675 865 ntAPPRIS P1 TSL 3 BASIC15.23■□□□□ 0.03
RAE1P78406 AC004461.1-201ENST00000412461 403 ntBASIC15.23■□□□□ 0.03
RAE1P78406 AFG3L1P-209ENST00000429663 458 ntTSL 3 BASIC15.23■□□□□ 0.03
RAE1P78406 AL359764.1-201ENST00000444330 504 ntTSL 3 BASIC15.23■□□□□ 0.03
RAE1P78406 EEF1DP4-201ENST00000446006 880 ntBASIC15.23■□□□□ 0.03
RAE1P78406 DNAJB3-201ENST00000446806 729 ntBASIC15.23■□□□□ 0.03
RAE1P78406 AL139010.1-201ENST00000454878 894 ntBASIC15.23■□□□□ 0.03
RAE1P78406 AC112482.1-201ENST00000492080 688 ntBASIC15.23■□□□□ 0.03
RAE1P78406 SERF1A-207ENST00000512649 846 ntTSL 2 BASIC15.23■□□□□ 0.03
RAE1P78406 PPP1R14B-203ENST00000542235 920 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
RAE1P78406 MAX-210ENST00000555419 765 ntTSL 5 BASIC15.23■□□□□ 0.03
RAE1P78406 NAA38-207ENST00000576861 556 ntTSL 3 BASIC15.23■□□□□ 0.03
RAE1P78406 AC007193.2-201ENST00000596807 472 ntTSL 3 BASIC15.23■□□□□ 0.03
RAE1P78406 LAMTOR5-208ENST00000614544 846 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
RAE1P78406 CU104787.1-201ENST00000624155 288 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
RAE1P78406 MAPKAPK5-207ENST00000551404 1630 ntAPPRIS P4 TSL 5 BASIC15.23■□□□□ 0.03
RAE1P78406 AP2A2-201ENST00000332231 4656 ntAPPRIS ALT1 TSL 1 (best) BASIC15.23■□□□□ 0.03
RAE1P78406 TUBB3-206ENST00000554444 1978 ntTSL 2 BASIC15.23■□□□□ 0.03
RAE1P78406 VPS26A-201ENST00000263559 2697 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
RAE1P78406 THEMIS2-202ENST00000373921 2687 ntAPPRIS P1 TSL 5 BASIC15.23■□□□□ 0.03
RAE1P78406 KCNK9-203ENST00000520439 1441 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
RAE1P78406 MAGI1-213ENST00000483466 4791 ntAPPRIS P3 TSL 1 (best) BASIC15.23■□□□□ 0.03
RAE1P78406 SLC26A5-202ENST00000339444 2474 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
RAE1P78406 KCNJ14-201ENST00000342291 2960 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
RAE1P78406 TSC2-204ENST00000401874 5421 ntAPPRIS ALT2 TSL 1 (best) BASIC15.23■□□□□ 0.03
RAE1P78406 AC090616.6-203ENST00000579186 1945 ntBASIC15.23■□□□□ 0.03
RAE1P78406 AC009090.5-201ENST00000624886 2285 ntBASIC15.23■□□□□ 0.03
RAE1P78406 PAX6-276ENST00000640684 1557 ntTSL 5 BASIC15.23■□□□□ 0.03
RAE1P78406 METTL25-201ENST00000248306 2093 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
RAE1P78406 STK4-AS1-201ENST00000434401 2065 ntTSL 2 BASIC15.23■□□□□ 0.03
RAE1P78406 DENND1A-202ENST00000373620 3612 ntAPPRIS ALT2 TSL 1 (best) BASIC15.23■□□□□ 0.03
RAE1P78406 ARFGAP2-202ENST00000426335 2937 ntTSL 2 BASIC15.23■□□□□ 0.03
RAE1P78406 LLGL2-209ENST00000578363 1393 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
RAE1P78406 MC1R-202ENST00000555147 3099 ntAPPRIS P1 BASIC15.23■□□□□ 0.03
RAE1P78406 ACOX3-202ENST00000413009 2374 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
RAE1P78406 RNPS1-220ENST00000566458 2037 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
RAE1P78406 FAM131B-206ENST00000443739 4382 ntAPPRIS ALT1 TSL 1 (best) BASIC15.22■□□□□ 0.03
RAE1P78406 C21orf33-201ENST00000291577 1674 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
RAE1P78406 DFNA5-202ENST00000409775 1689 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
RAE1P78406 KRT8-215ENST00000552150 1687 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
RAE1P78406 SYN1-202ENST00000340666 3172 ntAPPRIS ALT2 TSL 1 (best) BASIC15.22■□□□□ 0.03
RAE1P78406 MFSD4A-207ENST00000536357 1841 ntTSL 2 BASIC15.22■□□□□ 0.03
RAE1P78406 HNF1B-207ENST00000621123 1971 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
RAE1P78406 UNC119B-201ENST00000344651 4404 ntAPPRIS P1 TSL 2 BASIC15.22■□□□□ 0.03
RAE1P78406 TNFRSF13C-201ENST00000291232 3944 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
RAE1P78406 TOM1-206ENST00000425375 2252 ntTSL 2 BASIC15.22■□□□□ 0.03
RAE1P78406 RAP2C-201ENST00000342983 3896 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
RAE1P78406 ADGRB2-203ENST00000398538 4675 ntAPPRIS ALT2 TSL 5 BASIC15.22■□□□□ 0.03
RAE1P78406 ANKMY2-201ENST00000306999 2555 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
RAE1P78406 NDRG2-206ENST00000397844 2096 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
RAE1P78406 DKKL1-201ENST00000221498 1222 ntAPPRIS P2 TSL 1 (best) BASIC15.22■□□□□ 0.03
RAE1P78406 TRAPPC1-201ENST00000303731 811 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
RAE1P78406 APCDD1L-AS1-201ENST00000420279 555 ntTSL 5 BASIC15.22■□□□□ 0.03
RAE1P78406 BANF1P1-201ENST00000553684 263 ntBASIC15.22■□□□□ 0.03
RAE1P78406 RPL27-206ENST00000589913 697 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
RAE1P78406 AC010327.4-202ENST00000591484 748 ntBASIC15.22■□□□□ 0.03
RAE1P78406 AC099811.2-203ENST00000592574 958 ntAPPRIS P1 TSL 5 BASIC15.22■□□□□ 0.03
RAE1P78406 ALKBH7-203ENST00000599849 556 ntTSL 3 BASIC15.22■□□□□ 0.03
RAE1P78406 AC055717.3-201ENST00000622967 595 ntBASIC15.22■□□□□ 0.03
RAE1P78406 DBI-212ENST00000627305 620 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
RAE1P78406 TMEM25-206ENST00000442938 2228 ntTSL 2 BASIC15.22■□□□□ 0.03
RAE1P78406 ZNF662-201ENST00000328199 3186 ntAPPRIS P1 TSL 5 BASIC15.22■□□□□ 0.03
RAE1P78406 KRT8P37-201ENST00000451609 1420 ntBASIC15.22■□□□□ 0.03
RAE1P78406 TOM1L2-209ENST00000540946 1420 ntTSL 2 BASIC15.22■□□□□ 0.03
RAE1P78406 AL596257.1-201ENST00000641463 2694 ntBASIC15.22■□□□□ 0.03
RAE1P78406 MPPE1-211ENST00000588072 4236 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
RAE1P78406 EPS8L2-201ENST00000318562 3148 ntAPPRIS P2 TSL 1 (best) BASIC15.22■□□□□ 0.03
RAE1P78406 RUSC1-205ENST00000368354 3114 ntTSL 2 BASIC15.22■□□□□ 0.03
RAE1P78406 AQP3-201ENST00000297991 1849 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
RAE1P78406 RPN1-207ENST00000497289 2137 ntTSL 2 BASIC15.22■□□□□ 0.03
RAE1P78406 PUF60-208ENST00000526683 2412 ntAPPRIS P4 TSL 1 (best) BASIC15.22■□□□□ 0.03
RAE1P78406 ING1-203ENST00000375774 2870 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
RAE1P78406 CACNA1B-205ENST00000371363 9758 ntAPPRIS ALT2 TSL 5 BASIC15.22■□□□□ 0.03
RAE1P78406 PCYOX1L-201ENST00000274569 2546 ntAPPRIS P1 TSL 2 BASIC15.21■□□□□ 0.03
RAE1P78406 CAST-224ENST00000508830 2539 ntAPPRIS ALT2 TSL 5 BASIC15.21■□□□□ 0.03
RAE1P78406 DDOST-201ENST00000375048 2079 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
RAE1P78406 ITGB4-201ENST00000200181 5919 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
RAE1P78406 ANKRD33-201ENST00000301190 1935 ntTSL 2 BASIC15.21■□□□□ 0.03
RAE1P78406 IL18BP-204ENST00000393703 1788 ntAPPRIS P2 TSL 3 BASIC15.21■□□□□ 0.03
RAE1P78406 ESR2-206ENST00000553796 1634 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
RAE1P78406 TMEM225B-202ENST00000431679 1314 ntAPPRIS P1 TSL 5 BASIC15.21■□□□□ 0.03
RAE1P78406 SLC35C2-202ENST00000317734 2175 ntTSL 2 BASIC15.21■□□□□ 0.03
RAE1P78406 TMBIM7P-203ENST00000641617 1718 ntBASIC15.21■□□□□ 0.03
RAE1P78406 SLCO5A1-203ENST00000524945 3725 ntTSL 2 BASIC15.21■□□□□ 0.03
RAE1P78406 FUT7-201ENST00000314412 2584 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
RAE1P78406 KREMEN1-203ENST00000407188 1422 ntAPPRIS ALT2 TSL 1 (best) BASIC15.21■□□□□ 0.03
RAE1P78406 TEAD2-203ENST00000539846 1444 ntTSL 2 BASIC15.21■□□□□ 0.03
RAE1P78406 APLP1-202ENST00000537454 2266 ntTSL 2 BASIC15.21■□□□□ 0.03
RAE1P78406 C19orf70-201ENST00000309324 896 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
RAE1P78406 GPHB5-201ENST00000314140 393 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
RAE1P78406 DDT-201ENST00000350608 671 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Retrieved 100 of 98,524 protein–RNA pairs in 32.4 ms