Protein–RNA interactions for Protein: P78357

CNTNAP1, Contactin-associated protein 1, humanhuman

Predictions only

Length 1,384 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNTNAP1P78357 CCT7-216ENST00000540468 1674 ntTSL 2 BASIC18.89■□□□□ 0.61
CNTNAP1P78357 LINC00221-201ENST00000603633 1656 ntTSL 2 BASIC18.89■□□□□ 0.61
CNTNAP1P78357 CTNNAL1-201ENST00000325551 2490 ntAPPRIS P3 TSL 1 (best) BASIC18.89■□□□□ 0.61
CNTNAP1P78357 LSR-212ENST00000602122 2480 ntAPPRIS ALT2 TSL 2 BASIC18.89■□□□□ 0.61
CNTNAP1P78357 DDX19B-204ENST00000451014 1608 ntTSL 2 BASIC18.89■□□□□ 0.61
CNTNAP1P78357 DPY19L2P4-202ENST00000497063 2018 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
CNTNAP1P78357 ETNK2-203ENST00000367202 2434 ntAPPRIS P3 TSL 1 (best) BASIC18.89■□□□□ 0.61
CNTNAP1P78357 KCNQ2-202ENST00000344462 2750 ntAPPRIS ALT2 TSL 1 (best) BASIC18.89■□□□□ 0.61
CNTNAP1P78357 CCDC40-201ENST00000269318 1970 ntTSL 2 BASIC18.89■□□□□ 0.61
CNTNAP1P78357 AC100861.1-202ENST00000500853 1970 ntTSL 2 BASIC18.89■□□□□ 0.61
CNTNAP1P78357 POLG2-201ENST00000539111 1564 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
CNTNAP1P78357 AKIRIN1-202ENST00000432648 2741 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
CNTNAP1P78357 CCDC116-203ENST00000607942 1913 ntAPPRIS ALT2 TSL 2 BASIC18.89■□□□□ 0.61
CNTNAP1P78357 COQ7-201ENST00000321998 2657 ntAPPRIS P3 TSL 1 (best) BASIC18.89■□□□□ 0.61
CNTNAP1P78357 ZBTB45P2-201ENST00000452245 1531 ntBASIC18.89■□□□□ 0.61
CNTNAP1P78357 CHTF18-202ENST00000317063 2988 ntAPPRIS ALT2 TSL 5 BASIC18.88■□□□□ 0.61
CNTNAP1P78357 BTD-207ENST00000449107 1820 ntAPPRIS P4 TSL 2 BASIC18.88■□□□□ 0.61
CNTNAP1P78357 C16orf58-202ENST00000430477 2471 ntAPPRIS P2 TSL 1 (best) BASIC18.88■□□□□ 0.61
CNTNAP1P78357 AC005052.1-201ENST00000625181 2492 ntBASIC18.88■□□□□ 0.61
CNTNAP1P78357 PAQR4-202ENST00000318782 2793 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
CNTNAP1P78357 SLC35F3-201ENST00000366617 2762 ntAPPRIS ALT1 TSL 1 (best) BASIC18.88■□□□□ 0.61
CNTNAP1P78357 ZNF408-201ENST00000311764 2442 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
CNTNAP1P78357 MSTO2P-201ENST00000314835 1709 ntBASIC18.88■□□□□ 0.61
CNTNAP1P78357 NMNAT3-203ENST00000413939 1711 ntTSL 2 BASIC18.88■□□□□ 0.61
CNTNAP1P78357 MAPKAP1-205ENST00000373503 3045 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
CNTNAP1P78357 CCDC181-206ENST00000491570 1652 ntTSL 2 BASIC18.88■□□□□ 0.61
CNTNAP1P78357 GOLGA3-203ENST00000456883 5496 ntAPPRIS ALT2 TSL 1 (best) BASIC18.88■□□□□ 0.61
CNTNAP1P78357 EWSR1-203ENST00000332050 2552 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
CNTNAP1P78357 GPER1-206ENST00000617001 1900 ntTSL 5 BASIC18.88■□□□□ 0.61
CNTNAP1P78357 CBY1-201ENST00000216029 1133 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
CNTNAP1P78357 MTHFSD-202ENST00000381214 1210 ntAPPRIS ALT2 TSL 1 (best) BASIC18.88■□□□□ 0.61
CNTNAP1P78357 AP001056.1-201ENST00000411956 821 ntTSL 3 BASIC18.88■□□□□ 0.61
CNTNAP1P78357 C4orf3-202ENST00000504110 667 ntAPPRIS P3 TSL 1 (best) BASIC18.88■□□□□ 0.61
CNTNAP1P78357 AC008438.1-201ENST00000507521 549 ntTSL 2 BASIC18.88■□□□□ 0.61
CNTNAP1P78357 AC012640.1-201ENST00000509915 688 ntTSL 3 BASIC18.88■□□□□ 0.61
CNTNAP1P78357 SLC1A4-205ENST00000531327 1217 ntTSL 2 BASIC18.88■□□□□ 0.61
CNTNAP1P78357 AC108134.3-202ENST00000571404 1207 ntTSL 5 BASIC18.88■□□□□ 0.61
CNTNAP1P78357 GNRHR2-203ENST00000581100 1187 ntBASIC18.88■□□□□ 0.61
CNTNAP1P78357 IFI27-206ENST00000612813 725 ntAPPRIS P2 TSL 3 BASIC18.88■□□□□ 0.61
CNTNAP1P78357 AL021997.3-201ENST00000621053 557 ntAPPRIS P1 TSL 4 BASIC18.88■□□□□ 0.61
CNTNAP1P78357 HLA-C-210ENST00000640219 976 ntBASIC18.88■□□□□ 0.61
CNTNAP1P78357 ZFYVE28-210ENST00000515169 1590 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
CNTNAP1P78357 PCM1-206ENST00000518537 2171 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
CNTNAP1P78357 MB21D2-201ENST00000392452 3368 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
CNTNAP1P78357 KAT8-201ENST00000219797 1525 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
CNTNAP1P78357 CNTNAP3B-203ENST00000377561 5379 ntAPPRIS P2 TSL 1 (best) BASIC18.88■□□□□ 0.61
CNTNAP1P78357 RAB43-201ENST00000315150 4467 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
CNTNAP1P78357 FBP1-203ENST00000415431 1487 ntAPPRIS P1 TSL 2 BASIC18.88■□□□□ 0.61
CNTNAP1P78357 SLC4A4-201ENST00000264485 5852 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
CNTNAP1P78357 NSFL1C-202ENST00000353088 2611 ntTSL 2 BASIC18.88■□□□□ 0.61
CNTNAP1P78357 OSGEP-201ENST00000206542 2002 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
CNTNAP1P78357 INTS4P2-202ENST00000614726 2019 ntBASIC18.88■□□□□ 0.61
CNTNAP1P78357 ST7L-207ENST00000369669 1743 ntTSL 2 BASIC18.88■□□□□ 0.61
CNTNAP1P78357 RNF128-201ENST00000255499 2817 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
CNTNAP1P78357 FBXL5-202ENST00000412094 2837 ntAPPRIS ALT1 TSL 1 (best) BASIC18.87■□□□□ 0.61
CNTNAP1P78357 COLQ-206ENST00000603808 1668 ntAPPRIS ALT1 TSL 1 (best) BASIC18.87■□□□□ 0.61
CNTNAP1P78357 TBX2-201ENST00000240328 3339 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
CNTNAP1P78357 PTHLH-201ENST00000201015 1872 ntAPPRIS P3 TSL 3 BASIC18.87■□□□□ 0.61
CNTNAP1P78357 FBXL12-206ENST00000588922 1843 ntTSL 2 BASIC18.87■□□□□ 0.61
CNTNAP1P78357 KRT86-201ENST00000293525 2091 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
CNTNAP1P78357 IL1R1-205ENST00000410023 5143 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
CNTNAP1P78357 ARMC12-203ENST00000373869 1111 ntTSL 2 BASIC18.87■□□□□ 0.61
CNTNAP1P78357 HNRNPA1P32-201ENST00000396326 963 ntBASIC18.87■□□□□ 0.61
CNTNAP1P78357 CNN2P8-201ENST00000421872 913 ntBASIC18.87■□□□□ 0.61
CNTNAP1P78357 FGF13-204ENST00000436198 1165 ntTSL 2 BASIC18.87■□□□□ 0.61
CNTNAP1P78357 AC244250.1-201ENST00000438185 451 ntTSL 2 BASIC18.87■□□□□ 0.61
CNTNAP1P78357 HYAL1-208ENST00000457214 1084 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
CNTNAP1P78357 FTLP10-202ENST00000505798 471 ntBASIC18.87■□□□□ 0.61
CNTNAP1P78357 LEF1-AS1-204ENST00000508266 559 ntTSL 4 BASIC18.87■□□□□ 0.61
CNTNAP1P78357 AC006487.1-201ENST00000514506 1221 ntTSL 2 BASIC18.87■□□□□ 0.61
CNTNAP1P78357 CYB561A3-219ENST00000544118 1136 ntTSL 5 BASIC18.87■□□□□ 0.61
CNTNAP1P78357 AC005785.1-202ENST00000597164 237 ntTSL 3 BASIC18.87■□□□□ 0.61
CNTNAP1P78357 DNAJC17-212ENST00000627802 428 ntTSL 4 BASIC18.87■□□□□ 0.61
CNTNAP1P78357 PDE6G-204ENST00000573076 1505 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
CNTNAP1P78357 HIPK1-207ENST00000369561 3777 ntTSL 5 BASIC18.87■□□□□ 0.61
CNTNAP1P78357 NTMT1-204ENST00000372486 1487 ntAPPRIS P1 TSL 5 BASIC18.87■□□□□ 0.61
CNTNAP1P78357 NSMAF-202ENST00000427130 3371 ntTSL 2 BASIC18.87■□□□□ 0.61
CNTNAP1P78357 ZSWIM8-220ENST00000604524 5465 ntTSL 5 BASIC18.87■□□□□ 0.61
CNTNAP1P78357 METTL17-202ENST00000382985 1586 ntAPPRIS ALT2 TSL 1 (best) BASIC18.86■□□□□ 0.61
CNTNAP1P78357 DTX2-202ENST00000413936 2472 ntAPPRIS P3 TSL 1 (best) BASIC18.86■□□□□ 0.61
CNTNAP1P78357 SLC47A1-209ENST00000575023 2224 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
CNTNAP1P78357 MFF-202ENST00000337110 1760 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
CNTNAP1P78357 DUSP13-210ENST00000491677 1770 ntAPPRIS P3 TSL 1 (best) BASIC18.86■□□□□ 0.61
CNTNAP1P78357 BSG-204ENST00000545507 1795 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
CNTNAP1P78357 ZSCAN18-208ENST00000595944 1768 ntTSL 2 BASIC18.86■□□□□ 0.61
CNTNAP1P78357 SLC35G1-202ENST00000427197 2402 ntAPPRIS ALT2 TSL 1 (best) BASIC18.86■□□□□ 0.61
CNTNAP1P78357 TLE3-226ENST00000627388 5742 ntAPPRIS ALT1 TSL 5 BASIC18.86■□□□□ 0.61
CNTNAP1P78357 GGT7-201ENST00000336431 2642 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
CNTNAP1P78357 NAA35-201ENST00000361671 2649 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
CNTNAP1P78357 ZNF385B-204ENST00000410066 3288 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
CNTNAP1P78357 SGSH-203ENST00000570923 1546 ntTSL 2 BASIC18.86■□□□□ 0.61
CNTNAP1P78357 PRPF19-201ENST00000227524 2157 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
CNTNAP1P78357 CCDC142-201ENST00000290418 2835 ntAPPRIS P2 TSL 2 BASIC18.86■□□□□ 0.61
CNTNAP1P78357 NOM1-201ENST00000275820 6077 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
CNTNAP1P78357 SLC44A3-206ENST00000527077 1943 ntTSL 2 BASIC18.86■□□□□ 0.61
CNTNAP1P78357 MAP3K8-207ENST00000542547 2782 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
CNTNAP1P78357 RPL18A-201ENST00000222247 665 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
CNTNAP1P78357 COX4I1-201ENST00000253452 708 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
CNTNAP1P78357 NAT8-201ENST00000272425 947 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
CNTNAP1P78357 OR5C1-201ENST00000373680 963 ntAPPRIS P1 BASIC18.86■□□□□ 0.61
Retrieved 100 of 98,524 protein–RNA pairs in 32.7 ms