Protein–RNA interactions for Protein: P62987

UBA52, Ubiquitin-60S ribosomal protein L40, humanhuman

Known RBP Predictions only

Length 128 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBA52P62987 LEKR1-209ENST00000491763 1940 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
UBA52P62987 AC148477.5-201ENST00000625164 1645 ntBASIC13.98□□□□□ -0.17
UBA52P62987 FADS2-202ENST00000278840 3630 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
UBA52P62987 PTPRO-202ENST00000348962 5061 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
UBA52P62987 KREMEN1-201ENST00000327813 2719 ntAPPRIS P3 TSL 2 BASIC13.98□□□□□ -0.17
UBA52P62987 CDCP2-201ENST00000371330 2723 ntAPPRIS P2 TSL 2 BASIC13.98□□□□□ -0.17
UBA52P62987 CSNK1D-204ENST00000398519 1580 ntTSL 5 BASIC13.98□□□□□ -0.17
UBA52P62987 YIPF2-204ENST00000586748 1550 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
UBA52P62987 TMC4-209ENST00000617472 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC13.98□□□□□ -0.17
UBA52P62987 ARMC12-201ENST00000288065 1169 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
UBA52P62987 MRPL23-201ENST00000381514 919 ntTSL 3 BASIC13.98□□□□□ -0.17
UBA52P62987 RPS9-203ENST00000391752 772 ntAPPRIS P1 TSL 2 BASIC13.98□□□□□ -0.17
UBA52P62987 ATP6V0CP3-201ENST00000417255 467 ntBASIC13.98□□□□□ -0.17
UBA52P62987 CEND1P1-201ENST00000451006 455 ntBASIC13.98□□□□□ -0.17
UBA52P62987 AC005020.2-201ENST00000455905 830 ntAPPRIS P1 TSL 3 BASIC13.98□□□□□ -0.17
UBA52P62987 AC069503.2-201ENST00000546333 576 ntAPPRIS P1 TSL 5 BASIC13.98□□□□□ -0.17
UBA52P62987 SPAG7-207ENST00000575142 1094 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
UBA52P62987 STX10-204ENST00000587230 1136 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
UBA52P62987 TK1-204ENST00000590430 683 ntTSL 3 BASIC13.98□□□□□ -0.17
UBA52P62987 ZEB1-AS1-209ENST00000607455 559 ntTSL 4 BASIC13.98□□□□□ -0.17
UBA52P62987 TRIM29-221ENST00000627238 510 ntTSL 5 BASIC13.98□□□□□ -0.17
UBA52P62987 CALHM2-202ENST00000369788 1843 ntAPPRIS P1 TSL 2 BASIC13.98□□□□□ -0.17
UBA52P62987 SCNN1A-221ENST00000543768 2361 ntAPPRIS ALT2 TSL 2 BASIC13.98□□□□□ -0.17
UBA52P62987 AL445238.1-203ENST00000606050 1525 ntTSL 2 BASIC13.98□□□□□ -0.17
UBA52P62987 ARAP2-201ENST00000303965 7514 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
UBA52P62987 AC104581.4-201ENST00000623126 3052 ntBASIC13.98□□□□□ -0.17
UBA52P62987 PHYH-202ENST00000396913 1732 ntTSL 5 BASIC13.98□□□□□ -0.17
UBA52P62987 CLEC18A-209ENST00000615430 2215 ntAPPRIS P2 TSL 5 BASIC13.98□□□□□ -0.17
UBA52P62987 CLEC18C-211ENST00000618957 2215 ntAPPRIS P2 TSL 5 BASIC13.98□□□□□ -0.17
UBA52P62987 CLEC18B-205ENST00000619275 2215 ntAPPRIS ALT2 TSL 5 BASIC13.98□□□□□ -0.17
UBA52P62987 KIAA1191-201ENST00000298569 2991 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
UBA52P62987 UHRF2-201ENST00000276893 3452 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
UBA52P62987 LATS2-201ENST00000382592 5511 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
UBA52P62987 ELL2P1-201ENST00000413990 1906 ntBASIC13.98□□□□□ -0.17
UBA52P62987 F2RL1-201ENST00000296677 2914 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
UBA52P62987 ATP5F1-202ENST00000369722 3156 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
UBA52P62987 ATP2A3-204ENST00000397035 4182 ntTSL 5 BASIC13.97□□□□□ -0.17
UBA52P62987 DEGS1-201ENST00000323699 2101 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
UBA52P62987 CKMT2-202ENST00000424301 1637 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
UBA52P62987 SEPT6-209ENST00000489216 1617 ntAPPRIS ALT1 TSL 1 (best) BASIC13.97□□□□□ -0.17
UBA52P62987 TBPL1-208ENST00000613034 1625 ntAPPRIS P1 TSL 2 BASIC13.97□□□□□ -0.17
UBA52P62987 ARFRP1-212ENST00000618838 1623 ntAPPRIS P1 TSL 5 BASIC13.97□□□□□ -0.17
UBA52P62987 PPT1-215ENST00000641471 2368 ntBASIC13.97□□□□□ -0.17
UBA52P62987 PLXDC1-201ENST00000315392 6252 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
UBA52P62987 CPT2-201ENST00000371486 3094 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
UBA52P62987 BCS1L-202ENST00000392109 1583 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
UBA52P62987 BCS1L-204ENST00000392111 1584 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
UBA52P62987 AL049757.1-201ENST00000616842 1596 ntBASIC13.97□□□□□ -0.17
UBA52P62987 ING5-213ENST00000636051 4199 ntTSL 5 BASIC13.97□□□□□ -0.17
UBA52P62987 SNAI2-201ENST00000020945 2010 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
UBA52P62987 SALL3-206ENST00000616649 2958 ntTSL 5 BASIC13.97□□□□□ -0.17
UBA52P62987 SHROOM1-201ENST00000319854 3190 ntAPPRIS P3 TSL 1 (best) BASIC13.97□□□□□ -0.17
UBA52P62987 UBE2G1-204ENST00000572484 1514 ntTSL 5 BASIC13.97□□□□□ -0.17
UBA52P62987 FUT8-AS1-201ENST00000621019 1521 ntBASIC13.97□□□□□ -0.17
UBA52P62987 HAND2-AS1-202ENST00000502896 5278 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
UBA52P62987 C14orf93-202ENST00000341470 2221 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
UBA52P62987 SH2D6-202ENST00000389938 1975 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
UBA52P62987 SH3TC1-202ENST00000382521 829 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
UBA52P62987 TIMM17B-202ENST00000396779 1099 ntTSL 5 BASIC13.97□□□□□ -0.17
UBA52P62987 METTL21A-202ENST00000406927 1103 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
UBA52P62987 AL645939.2-201ENST00000427340 991 ntBASIC13.97□□□□□ -0.17
UBA52P62987 AC116612.1-201ENST00000557144 562 ntTSL 3 BASIC13.97□□□□□ -0.17
UBA52P62987 PSME1-205ENST00000559123 1033 ntTSL 5 BASIC13.97□□□□□ -0.17
UBA52P62987 ZFPM1-204ENST00000563351 808 ntTSL 2 BASIC13.97□□□□□ -0.17
UBA52P62987 AC009061.1-201ENST00000567261 475 ntTSL 3 BASIC13.97□□□□□ -0.17
UBA52P62987 AP002472.1-201ENST00000577490 586 ntBASIC13.97□□□□□ -0.17
UBA52P62987 MIR3197-201ENST00000582241 73 ntBASIC13.97□□□□□ -0.17
UBA52P62987 OAZ1-202ENST00000582888 969 ntAPPRIS ALT1 TSL 5 BASIC13.97□□□□□ -0.17
UBA52P62987 GIPC1-213ENST00000591349 1068 ntTSL 2 BASIC13.97□□□□□ -0.17
UBA52P62987 AC010654.1-201ENST00000615722 808 ntBASIC13.97□□□□□ -0.17
UBA52P62987 NFIB-212ENST00000622520 1274 ntTSL 5 BASIC13.97□□□□□ -0.17
UBA52P62987 C9orf139-202ENST00000623196 4990 ntTSL 2 BASIC13.97□□□□□ -0.17
UBA52P62987 POU5F1-204ENST00000471529 1723 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
UBA52P62987 SMARCA4-214ENST00000589677 5181 ntAPPRIS ALT1 TSL 5 BASIC13.97□□□□□ -0.17
UBA52P62987 C10orf111-201ENST00000624760 1714 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
UBA52P62987 PATZ1-204ENST00000405309 3711 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
UBA52P62987 ELFN1-202ENST00000561626 3742 ntAPPRIS P1 TSL 2 BASIC13.97□□□□□ -0.17
UBA52P62987 TCP10-202ENST00000397829 2141 ntAPPRIS P2 TSL 1 (best) BASIC13.97□□□□□ -0.17
UBA52P62987 ARHGEF7-204ENST00000375736 5032 ntAPPRIS P3 TSL 1 (best) BASIC13.97□□□□□ -0.17
UBA52P62987 MFGE8-215ENST00000566497 1689 ntAPPRIS P1 TSL 5 BASIC13.97□□□□□ -0.17
UBA52P62987 ERO1B-202ENST00000354619 4567 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
UBA52P62987 AC010491.1-201ENST00000563101 2797 ntBASIC13.97□□□□□ -0.17
UBA52P62987 CYBA-210ENST00000569359 1415 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
UBA52P62987 PPL-201ENST00000345988 6238 ntAPPRIS P2 TSL 1 (best) BASIC13.97□□□□□ -0.17
UBA52P62987 NDRG2-206ENST00000397844 2096 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
UBA52P62987 ZBTB11-AS1-201ENST00000609682 2743 ntBASIC13.97□□□□□ -0.17
UBA52P62987 EIF2B4-206ENST00000451130 1633 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
UBA52P62987 MAGEA2-201ENST00000595583 1830 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
UBA52P62987 EIF4G1-216ENST00000427845 5038 ntTSL 5 BASIC13.97□□□□□ -0.17
UBA52P62987 TUBB2B-201ENST00000259818 2020 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
UBA52P62987 TRIM46-211ENST00000611379 3082 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
UBA52P62987 ARHGEF16-201ENST00000378371 2219 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
UBA52P62987 GID4-202ENST00000376345 1391 ntTSL 3 BASIC13.96□□□□□ -0.17
UBA52P62987 PODN-202ENST00000371500 3287 ntAPPRIS ALT2 TSL 1 (best) BASIC13.96□□□□□ -0.17
UBA52P62987 TBC1D1-203ENST00000402522 1567 ntTSL 2 BASIC13.96□□□□□ -0.17
UBA52P62987 TCP11L2-203ENST00000547153 1788 ntTSL 2 BASIC13.96□□□□□ -0.17
UBA52P62987 C3-201ENST00000245907 5263 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
UBA52P62987 PKN1-202ENST00000342216 2960 ntTSL 2 BASIC13.96□□□□□ -0.17
UBA52P62987 WDR33-201ENST00000322313 9471 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
UBA52P62987 KNSTRN-201ENST00000249776 1714 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Retrieved 100 of 98,524 protein–RNA pairs in 50.7 ms