Protein–RNA interactions for Protein: P55283

CDH4, Cadherin-4, humanhuman

Predictions only

Length 916 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH4P55283 REPS1-208ENST00000450536 4537 ntAPPRIS ALT1 TSL 1 (best) BASIC16.39■□□□□ 0.21
CDH4P55283 CTSL-203ENST00000343150 2177 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
CDH4P55283 GRB7-205ENST00000445327 2197 ntTSL 2 BASIC16.39■□□□□ 0.21
CDH4P55283 CD8B-201ENST00000331469 832 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
CDH4P55283 RAC2-204ENST00000406508 893 ntTSL 5 BASIC16.39■□□□□ 0.21
CDH4P55283 AC006001.2-201ENST00000448096 393 ntTSL 3 BASIC16.39■□□□□ 0.21
CDH4P55283 AC025183.2-201ENST00000503386 428 ntTSL 3 BASIC16.39■□□□□ 0.21
CDH4P55283 AC044860.1-202ENST00000559481 777 ntBASIC16.39■□□□□ 0.21
CDH4P55283 MIR4745-201ENST00000577608 62 ntBASIC16.39■□□□□ 0.21
CDH4P55283 AC129926.1-201ENST00000581944 614 ntTSL 2 BASIC16.39■□□□□ 0.21
CDH4P55283 AL450472.2-201ENST00000603663 1156 ntBASIC16.39■□□□□ 0.21
CDH4P55283 AC008738.7-201ENST00000609744 511 ntBASIC16.39■□□□□ 0.21
CDH4P55283 ARHGEF4-205ENST00000409359 5489 ntTSL 5 BASIC16.39■□□□□ 0.21
CDH4P55283 AL513523.2-202ENST00000427283 2040 ntBASIC16.39■□□□□ 0.21
CDH4P55283 TXNRD2-214ENST00000491939 2238 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
CDH4P55283 ACOT9-201ENST00000336430 1675 ntAPPRIS P3 TSL 1 (best) BASIC16.39■□□□□ 0.21
CDH4P55283 RRBP1-208ENST00000470422 2070 ntTSL 2 BASIC16.39■□□□□ 0.21
CDH4P55283 POLR2A-201ENST00000572844 2083 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
CDH4P55283 ZDHHC11-209ENST00000511539 1303 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
CDH4P55283 ZDHHC11B-204ENST00000622126 1301 ntTSL 5 BASIC16.39■□□□□ 0.21
CDH4P55283 FUT8-213ENST00000557164 2269 ntTSL 2 BASIC16.39■□□□□ 0.21
CDH4P55283 CACNA1H-206ENST00000565831 7815 ntAPPRIS ALT2 TSL 1 (best) BASIC16.39■□□□□ 0.21
CDH4P55283 KIAA0319L-201ENST00000325722 4789 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
CDH4P55283 PPP1R26-202ENST00000401470 4769 ntAPPRIS P1 TSL 5 BASIC16.39■□□□□ 0.21
CDH4P55283 PCSK4-201ENST00000300954 2661 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
CDH4P55283 AMOTL2-211ENST00000513145 2653 ntAPPRIS ALT1 TSL 1 (best) BASIC16.39■□□□□ 0.21
CDH4P55283 MYO1D-201ENST00000318217 5563 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
CDH4P55283 COL23A1-202ENST00000407622 2329 ntAPPRIS ALT2 TSL 5 BASIC16.39■□□□□ 0.21
CDH4P55283 HECTD1-201ENST00000399332 9134 ntAPPRIS P1 TSL 5 BASIC16.39■□□□□ 0.21
CDH4P55283 DEPTOR-203ENST00000523492 1397 ntTSL 2 BASIC16.38■□□□□ 0.21
CDH4P55283 DMRTC2-201ENST00000269945 1792 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
CDH4P55283 LCK-201ENST00000333070 2166 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
CDH4P55283 AC006064.2-201ENST00000501075 2196 ntTSL 2 BASIC16.38■□□□□ 0.21
CDH4P55283 WDR20-211ENST00000556807 2382 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
CDH4P55283 SGO1-203ENST00000412997 2587 ntAPPRIS P4 TSL 1 (best) BASIC16.38■□□□□ 0.21
CDH4P55283 POLR1D-207ENST00000621089 1606 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
CDH4P55283 DIMT1-201ENST00000199320 2859 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
CDH4P55283 STC2-201ENST00000265087 5353 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
CDH4P55283 PRKCZ-202ENST00000400921 2294 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
CDH4P55283 SHISA5-210ENST00000444115 2081 ntTSL 2 BASIC16.38■□□□□ 0.21
CDH4P55283 SLC10A3-203ENST00000393586 1893 ntTSL 5 BASIC16.38■□□□□ 0.21
CDH4P55283 FBXO21-201ENST00000330622 2906 ntAPPRIS P3 TSL 1 (best) BASIC16.38■□□□□ 0.21
CDH4P55283 PITX2-204ENST00000394595 1693 ntTSL 5 BASIC16.38■□□□□ 0.21
CDH4P55283 CCDC28A-201ENST00000332797 1496 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
CDH4P55283 NAIF1-201ENST00000373078 3399 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
CDH4P55283 TMEM41A-201ENST00000296254 1060 ntTSL 2 BASIC16.38■□□□□ 0.21
CDH4P55283 CCDC182-201ENST00000299415 832 ntAPPRIS P1 BASIC16.38■□□□□ 0.21
CDH4P55283 KLK8-202ENST00000320838 456 ntTSL 5 BASIC16.38■□□□□ 0.21
CDH4P55283 MUC1-201ENST00000337604 859 ntAPPRIS P3 TSL 1 (best) BASIC16.38■□□□□ 0.21
CDH4P55283 XAGE1A-203ENST00000375602 614 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
CDH4P55283 XAGE1B-203ENST00000375616 614 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
CDH4P55283 FAM207CP-201ENST00000443486 507 ntBASIC16.38■□□□□ 0.21
CDH4P55283 AL606760.1-201ENST00000458151 1181 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
CDH4P55283 PDCD6-202ENST00000505221 672 ntTSL 3 BASIC16.38■□□□□ 0.21
CDH4P55283 CLDND1-222ENST00000510545 2124 ntAPPRIS P1 TSL 5 BASIC16.38■□□□□ 0.21
CDH4P55283 AC009720.1-201ENST00000511867 586 ntTSL 2 BASIC16.38■□□□□ 0.21
CDH4P55283 CXCL6-203ENST00000515050 557 ntAPPRIS ALT1 TSL 1 (best) BASIC16.38■□□□□ 0.21
CDH4P55283 STOM-203ENST00000538954 1257 ntTSL 5 BASIC16.38■□□□□ 0.21
CDH4P55283 ARL6IP1-202ENST00000546206 1107 ntTSL 2 BASIC16.38■□□□□ 0.21
CDH4P55283 AC040162.1-202ENST00000573493 573 ntAPPRIS P1 TSL 3 BASIC16.38■□□□□ 0.21
CDH4P55283 AC025048.3-201ENST00000590609 569 ntBASIC16.38■□□□□ 0.21
CDH4P55283 AC005702.4-201ENST00000618393 416 ntBASIC16.38■□□□□ 0.21
CDH4P55283 ADARB1-202ENST00000360697 6604 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
CDH4P55283 HEY1-208ENST00000523976 1325 ntTSL 2 BASIC16.38■□□□□ 0.21
CDH4P55283 DMTN-223ENST00000523782 2235 ntAPPRIS P1 TSL 5 BASIC16.38■□□□□ 0.21
CDH4P55283 PTPRN2-205ENST00000409483 4711 ntAPPRIS ALT2 TSL 2 BASIC16.38■□□□□ 0.21
CDH4P55283 ZP3-204ENST00000416245 1846 ntTSL 2 BASIC16.38■□□□□ 0.21
CDH4P55283 HAGH-202ENST00000397356 2984 ntAPPRIS P3 TSL 1 (best) BASIC16.38■□□□□ 0.21
CDH4P55283 DNAJA3-201ENST00000262375 2763 ntAPPRIS P3 TSL 1 (best) BASIC16.38■□□□□ 0.21
CDH4P55283 LLGL2-201ENST00000167462 3480 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
CDH4P55283 SLC6A9-202ENST00000360584 2330 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
CDH4P55283 ESR2-209ENST00000555278 1883 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
CDH4P55283 SLC25A35-202ENST00000577745 1860 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
CDH4P55283 AL603832.2-201ENST00000566195 2125 ntBASIC16.37■□□□□ 0.21
CDH4P55283 ZNF281-203ENST00000367353 3080 ntAPPRIS P3 TSL 1 (best) BASIC16.37■□□□□ 0.21
CDH4P55283 FMNL3-202ENST00000352151 4006 ntAPPRIS P3 TSL 2 BASIC16.37■□□□□ 0.21
CDH4P55283 WDR45-202ENST00000356463 1688 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
CDH4P55283 IDH3G-203ENST00000370093 1662 ntTSL 2 BASIC16.37■□□□□ 0.21
CDH4P55283 CCNC-209ENST00000520371 2186 ntTSL 5 BASIC16.37■□□□□ 0.21
CDH4P55283 SQLE-201ENST00000265896 2961 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
CDH4P55283 BANP-204ENST00000393208 2283 ntTSL 2 BASIC16.37■□□□□ 0.21
CDH4P55283 DXO-203ENST00000375356 1533 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
CDH4P55283 PNPO-202ENST00000434554 1196 ntTSL 2 BASIC16.37■□□□□ 0.21
CDH4P55283 TEX48-201ENST00000436752 708 ntAPPRIS P1 TSL 5 BASIC16.37■□□□□ 0.21
CDH4P55283 AC016735.2-201ENST00000438736 569 ntTSL 4 BASIC16.37■□□□□ 0.21
CDH4P55283 AL161908.2-201ENST00000457964 394 ntTSL 2 BASIC16.37■□□□□ 0.21
CDH4P55283 CCDC159-201ENST00000458408 1062 ntAPPRIS P1 TSL 5 BASIC16.37■□□□□ 0.21
CDH4P55283 AC092910.3-202ENST00000469070 982 ntTSL 3 BASIC16.37■□□□□ 0.21
CDH4P55283 AC091133.3-201ENST00000504865 432 ntTSL 5 BASIC16.37■□□□□ 0.21
CDH4P55283 REEP4-207ENST00000523293 913 ntTSL 3 BASIC16.37■□□□□ 0.21
CDH4P55283 COQ7-202ENST00000544894 819 ntAPPRIS ALT2 TSL 1 (best) BASIC16.37■□□□□ 0.21
CDH4P55283 CD300LG-205ENST00000586233 942 ntAPPRIS ALT2 TSL 1 (best) BASIC16.37■□□□□ 0.21
CDH4P55283 AC005746.1-201ENST00000589244 672 ntTSL 3 BASIC16.37■□□□□ 0.21
CDH4P55283 TEX48-202ENST00000612244 662 ntTSL 3 BASIC16.37■□□□□ 0.21
CDH4P55283 HFE2-206ENST00000634927 506 ntTSL 4 BASIC16.37■□□□□ 0.21
CDH4P55283 AC027796.3-201ENST00000572919 4753 ntAPPRIS P1 TSL 5 BASIC16.37■□□□□ 0.21
CDH4P55283 C16orf89-201ENST00000315997 1872 ntAPPRIS P3 TSL 1 (best) BASIC16.37■□□□□ 0.21
CDH4P55283 CELF4-202ENST00000361795 1853 ntAPPRIS ALT1 TSL 2 BASIC16.37■□□□□ 0.21
CDH4P55283 CMKLR1-206ENST00000552995 1890 ntAPPRIS P3 TSL 1 (best) BASIC16.37■□□□□ 0.21
CDH4P55283 ADAMTS13-206ENST00000371929 4934 ntAPPRIS P4 TSL 1 (best) BASIC16.37■□□□□ 0.21
Retrieved 100 of 98,524 protein–RNA pairs in 58.1 ms