Protein–RNA interactions for Protein: P54277

PMS1, PMS1 protein homolog 1, humanhuman

Known RBP Predictions only

Length 932 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PMS1P54277 ZNF804A-201ENST00000302277 4690 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
PMS1P54277 RAB33B-201ENST00000305626 4562 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
PMS1P54277 NFATC4-210ENST00000554050 3057 ntAPPRIS ALT2 TSL 1 (best) BASIC17.7■□□□□ 0.42
PMS1P54277 UVSSA-206ENST00000507531 2597 ntAPPRIS P2 TSL 1 (best) BASIC17.7■□□□□ 0.42
PMS1P54277 CERCAM-213ENST00000612334 1554 ntAPPRIS ALT2 TSL 5 BASIC17.7■□□□□ 0.42
PMS1P54277 SLC12A5-209ENST00000616201 2955 ntTSL 5 BASIC17.7■□□□□ 0.42
PMS1P54277 DNAJB9-201ENST00000249356 2715 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
PMS1P54277 BID-213ENST00000615414 2236 ntTSL 5 BASIC17.7■□□□□ 0.42
PMS1P54277 FBXO44-204ENST00000376762 1734 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
PMS1P54277 CHRD-201ENST00000204604 3521 ntAPPRIS P3 TSL 1 (best) BASIC17.69■□□□□ 0.42
PMS1P54277 HOXA3-202ENST00000396352 3263 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
PMS1P54277 ATP2C1-218ENST00000510168 5067 ntAPPRIS ALT1 TSL 5 BASIC17.69■□□□□ 0.42
PMS1P54277 FOXH1-201ENST00000377317 2503 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
PMS1P54277 SMAD6-201ENST00000288840 3835 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
PMS1P54277 SCRIB-203ENST00000377533 5108 ntAPPRIS ALT2 TSL 1 (best) BASIC17.69■□□□□ 0.42
PMS1P54277 CGREF1-205ENST00000404694 1376 ntAPPRIS ALT2 TSL 2 BASIC17.69■□□□□ 0.42
PMS1P54277 PPP2R5D-202ENST00000394110 2894 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
PMS1P54277 AC105250.1-201ENST00000509378 2057 ntBASIC17.69■□□□□ 0.42
PMS1P54277 SPACA4-201ENST00000321762 972 ntAPPRIS P1 BASIC17.69■□□□□ 0.42
PMS1P54277 METTL26-202ENST00000338401 544 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
PMS1P54277 ITGA9-AS1-201ENST00000366441 895 ntTSL 3 BASIC17.69■□□□□ 0.42
PMS1P54277 S100A16-204ENST00000368706 1118 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
PMS1P54277 FAM220BP-201ENST00000377689 816 ntBASIC17.69■□□□□ 0.42
PMS1P54277 AC097532.1-201ENST00000440802 322 ntTSL 2 BASIC17.69■□□□□ 0.42
PMS1P54277 SPDYE11-202ENST00000450699 704 ntBASIC17.69■□□□□ 0.42
PMS1P54277 TIMM8BP1-201ENST00000452384 211 ntBASIC17.69■□□□□ 0.42
PMS1P54277 TMUB1-204ENST00000476627 882 ntAPPRIS P1 TSL 3 BASIC17.69■□□□□ 0.42
PMS1P54277 RN7SL589P-201ENST00000481268 310 ntBASIC17.69■□□□□ 0.42
PMS1P54277 ASXL1-206ENST00000542461 1068 ntTSL 5 BASIC17.69■□□□□ 0.42
PMS1P54277 SPDYE9P-201ENST00000570642 692 ntBASIC17.69■□□□□ 0.42
PMS1P54277 ZPBP2-204ENST00000584588 1277 ntTSL 5 BASIC17.69■□□□□ 0.42
PMS1P54277 SPDYE10P-202ENST00000612005 668 ntBASIC17.69■□□□□ 0.42
PMS1P54277 SPDYE8P-202ENST00000612377 668 ntBASIC17.69■□□□□ 0.42
PMS1P54277 LINC00623-204ENST00000617702 746 ntTSL 5 BASIC17.69■□□□□ 0.42
PMS1P54277 LINC01635-202ENST00000635097 1023 ntTSL 5 BASIC17.69■□□□□ 0.42
PMS1P54277 AQP3-201ENST00000297991 1849 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
PMS1P54277 PCBP4-201ENST00000322099 1964 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
PMS1P54277 TMPRSS13-203ENST00000524993 1950 ntAPPRIS P3 TSL 1 (best) BASIC17.69■□□□□ 0.42
PMS1P54277 XRCC1-202ENST00000543982 1994 ntTSL 2 BASIC17.69■□□□□ 0.42
PMS1P54277 BANK1-207ENST00000508653 2115 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
PMS1P54277 TOM1-206ENST00000425375 2252 ntTSL 2 BASIC17.69■□□□□ 0.42
PMS1P54277 CCKAR-201ENST00000295589 1720 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
PMS1P54277 KRT27-201ENST00000301656 1612 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
PMS1P54277 SIRT6-202ENST00000337491 1641 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
PMS1P54277 KLHDC2-206ENST00000554589 1641 ntTSL 5 BASIC17.69■□□□□ 0.42
PMS1P54277 ZNF19-208ENST00000565637 2612 ntTSL 2 BASIC17.68■□□□□ 0.42
PMS1P54277 GLIDR-204ENST00000638724 1765 ntTSL 5 BASIC17.68■□□□□ 0.42
PMS1P54277 TSEN2-207ENST00000454502 1909 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
PMS1P54277 SLC44A3-206ENST00000527077 1943 ntTSL 2 BASIC17.68■□□□□ 0.42
PMS1P54277 NTRK3-202ENST00000355254 2938 ntAPPRIS ALT2 TSL 5 BASIC17.68■□□□□ 0.42
PMS1P54277 JAKMIP1-204ENST00000409831 2371 ntAPPRIS P1 TSL 2 BASIC17.68■□□□□ 0.42
PMS1P54277 ZBTB45P2-201ENST00000452245 1531 ntBASIC17.68■□□□□ 0.42
PMS1P54277 SLC26A1-202ENST00000398516 3109 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
PMS1P54277 PRR5-203ENST00000403581 2279 ntTSL 2 BASIC17.68■□□□□ 0.42
PMS1P54277 KIAA1147-202ENST00000536163 7296 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
PMS1P54277 CDSN-202ENST00000376288 2552 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
PMS1P54277 RTN4RL1-201ENST00000331238 3625 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
PMS1P54277 POLR2J4-203ENST00000326391 1422 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
PMS1P54277 PTMS-202ENST00000389462 773 ntTSL 2 BASIC17.68■□□□□ 0.42
PMS1P54277 HTR5BP-201ENST00000430851 1154 ntBASIC17.68■□□□□ 0.42
PMS1P54277 FAM41C-202ENST00000432963 504 ntTSL 2 BASIC17.68■□□□□ 0.42
PMS1P54277 AC093714.2-201ENST00000489626 763 ntTSL 3 BASIC17.68■□□□□ 0.42
PMS1P54277 RNA5SP410-201ENST00000516285 106 ntBASIC17.68■□□□□ 0.42
PMS1P54277 AC027117.2-201ENST00000522768 510 ntTSL 3 BASIC17.68■□□□□ 0.42
PMS1P54277 SLC25A39P2-201ENST00000537614 270 ntBASIC17.68■□□□□ 0.42
PMS1P54277 EIF2AK4-208ENST00000559624 3548 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
PMS1P54277 RNPS1-220ENST00000566458 2037 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
PMS1P54277 DCTPP1-203ENST00000567983 801 ntTSL 5 BASIC17.68■□□□□ 0.42
PMS1P54277 GNAO1-210ENST00000569295 930 ntTSL 2 BASIC17.68■□□□□ 0.42
PMS1P54277 ARHGDIA-208ENST00000581876 709 ntTSL 3 BASIC17.68■□□□□ 0.42
PMS1P54277 FOLH1-202ENST00000340334 2697 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
PMS1P54277 SFXN1-201ENST00000321442 4231 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
PMS1P54277 CRAMP1-202ENST00000397412 7772 ntAPPRIS P1 TSL 5 BASIC17.68■□□□□ 0.42
PMS1P54277 CHRFAM7A-203ENST00000401522 1913 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
PMS1P54277 AC090616.6-203ENST00000579186 1945 ntBASIC17.68■□□□□ 0.42
PMS1P54277 RIC8B-213ENST00000638198 1611 ntTSL 5 BASIC17.68■□□□□ 0.42
PMS1P54277 LOX-206ENST00000639739 1626 ntTSL 5 BASIC17.68■□□□□ 0.42
PMS1P54277 RAB11FIP5-205ENST00000486777 6120 ntTSL 5 BASIC17.68■□□□□ 0.42
PMS1P54277 NRCAM-217ENST00000613830 3025 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
PMS1P54277 CD1E-212ENST00000368167 1458 ntAPPRIS P4 TSL 1 (best) BASIC17.68■□□□□ 0.42
PMS1P54277 RHD-207ENST00000454452 1303 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
PMS1P54277 TMEM143-203ENST00000435956 2272 ntTSL 2 BASIC17.68■□□□□ 0.42
PMS1P54277 CES4A-207ENST00000540947 2284 ntAPPRIS P2 TSL 2 BASIC17.68■□□□□ 0.42
PMS1P54277 CNOT8-202ENST00000403027 2604 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
PMS1P54277 NKPD1-201ENST00000317951 4233 ntAPPRIS P1 TSL 2 BASIC17.68■□□□□ 0.42
PMS1P54277 RABL2B-204ENST00000395593 2341 ntAPPRIS ALT2 TSL 1 (best) BASIC17.67■□□□□ 0.42
PMS1P54277 M6PR-202ENST00000536844 2305 ntTSL 3 BASIC17.67■□□□□ 0.42
PMS1P54277 API5-202ENST00000420461 2009 ntTSL 2 BASIC17.67■□□□□ 0.42
PMS1P54277 VPS26A-201ENST00000263559 2697 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
PMS1P54277 KCNJ5-201ENST00000338350 1734 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
PMS1P54277 CDCP2-201ENST00000371330 2723 ntAPPRIS P2 TSL 2 BASIC17.67■□□□□ 0.42
PMS1P54277 DDOST-201ENST00000375048 2079 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
PMS1P54277 MBD1-222ENST00000590208 2913 ntAPPRIS ALT2 TSL 1 (best) BASIC17.67■□□□□ 0.42
PMS1P54277 CYP4F2-202ENST00000221700 2407 ntAPPRIS P2 TSL 1 (best) BASIC17.67■□□□□ 0.42
PMS1P54277 MAGEA12-202ENST00000393869 1761 ntAPPRIS P1 TSL 2 BASIC17.67■□□□□ 0.42
PMS1P54277 FCN3-201ENST00000270879 1030 ntAPPRIS P4 TSL 1 (best) BASIC17.67■□□□□ 0.42
PMS1P54277 FIGLA-201ENST00000332372 722 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
PMS1P54277 CD82-202ENST00000342935 967 ntTSL 5 BASIC17.67■□□□□ 0.42
PMS1P54277 SMN1-201ENST00000351205 900 ntAPPRIS P3 TSL 1 (best) BASIC17.67■□□□□ 0.42
PMS1P54277 FCN3-202ENST00000354982 997 ntAPPRIS ALT2 TSL 1 (best) BASIC17.67■□□□□ 0.42
Retrieved 100 of 98,524 protein–RNA pairs in 44.1 ms