Protein–RNA interactions for Protein: P53384

NUBP1, Cytosolic Fe-S cluster assembly factor NUBP1, humanhuman

Predictions only

Length 320 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NUBP1P53384 MRPL11-201ENST00000310999 1605 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
NUBP1P53384 SSUH2-202ENST00000341795 1799 ntAPPRIS P3 TSL 1 (best) BASIC16.07■□□□□ 0.16
NUBP1P53384 ANHX-201ENST00000419717 1765 ntAPPRIS P1 TSL 2 BASIC16.07■□□□□ 0.16
NUBP1P53384 RDH12-201ENST00000267502 1833 ntAPPRIS P1 TSL 5 BASIC16.07■□□□□ 0.16
NUBP1P53384 AMT-202ENST00000395338 1831 ntAPPRIS ALT1 TSL 1 (best) BASIC16.07■□□□□ 0.16
NUBP1P53384 TBC1D10A-203ENST00000403362 1833 ntAPPRIS ALT2 TSL 5 BASIC16.07■□□□□ 0.16
NUBP1P53384 LRPPRC-203ENST00000409946 1848 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
NUBP1P53384 TINF2-201ENST00000267415 1852 ntAPPRIS P4 TSL 1 (best) BASIC16.07■□□□□ 0.16
NUBP1P53384 SELENBP1-204ENST00000426705 1928 ntTSL 2 BASIC16.07■□□□□ 0.16
NUBP1P53384 MFNG-201ENST00000356998 2088 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
NUBP1P53384 RTN4-201ENST00000317610 2333 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
NUBP1P53384 SLC25A46-201ENST00000355943 2385 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
NUBP1P53384 GRAMD1B-202ENST00000450171 2431 ntTSL 2 BASIC16.07■□□□□ 0.16
NUBP1P53384 SNX4-201ENST00000251775 2513 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
NUBP1P53384 P3H4-201ENST00000355468 2791 ntAPPRIS P2 TSL 2 BASIC16.07■□□□□ 0.16
NUBP1P53384 MARK2-201ENST00000350490 2903 ntAPPRIS ALT2 TSL 1 (best) BASIC16.07■□□□□ 0.16
NUBP1P53384 KLHL2-201ENST00000226725 3134 ntAPPRIS P3 TSL 1 (best) BASIC16.06■□□□□ 0.16
NUBP1P53384 PDX1-201ENST00000381033 2501 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
NUBP1P53384 FOLH1-204ENST00000356696 2403 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
NUBP1P53384 ST6GALNAC6-201ENST00000291839 2280 ntAPPRIS P3 TSL 1 (best) BASIC16.06■□□□□ 0.16
NUBP1P53384 EWSR1-202ENST00000332035 1989 ntAPPRIS ALT2 TSL 2 BASIC16.06■□□□□ 0.16
NUBP1P53384 MAPRE3-201ENST00000233121 1892 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
NUBP1P53384 PRMT2-208ENST00000451211 1878 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
NUBP1P53384 KAT7-213ENST00000510819 1769 ntTSL 2 BASIC16.06■□□□□ 0.16
NUBP1P53384 COLQ-206ENST00000603808 1668 ntAPPRIS ALT1 TSL 1 (best) BASIC16.06■□□□□ 0.16
NUBP1P53384 WSCD1-208ENST00000573634 1573 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
NUBP1P53384 MSC-AS1-208ENST00000522519 1537 ntTSL 2 BASIC16.06■□□□□ 0.16
NUBP1P53384 CSNK2A1-203ENST00000400217 1451 ntTSL 2 BASIC16.06■□□□□ 0.16
NUBP1P53384 PSMC3IP-202ENST00000393795 1416 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
NUBP1P53384 ADARB1-201ENST00000348831 6882 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
NUBP1P53384 ZNF890P-201ENST00000422060 1352 ntTSL 2 BASIC16.06■□□□□ 0.16
NUBP1P53384 AC092978.1-201ENST00000474979 1309 ntTSL 5 BASIC16.06■□□□□ 0.16
NUBP1P53384 AC092978.1-202ENST00000637590 1327 ntBASIC16.06■□□□□ 0.16
NUBP1P53384 B9D1-202ENST00000268841 755 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
NUBP1P53384 SPDYE4-201ENST00000328794 923 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
NUBP1P53384 HIST2H2AA3-201ENST00000369159 549 ntAPPRIS P1 BASIC16.06■□□□□ 0.16
NUBP1P53384 PGGT1B-202ENST00000379615 903 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
NUBP1P53384 IGLC7-201ENST00000390331 441 ntAPPRIS P1 BASIC16.06■□□□□ 0.16
NUBP1P53384 SMARCE1-204ENST00000400122 1263 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
NUBP1P53384 DERL3-204ENST00000406855 1063 ntAPPRIS ALT2 TSL 1 (best) BASIC16.06■□□□□ 0.16
NUBP1P53384 RN7SKP38-201ENST00000410782 309 ntBASIC16.06■□□□□ 0.16
NUBP1P53384 KRTAP10-13P-201ENST00000412914 571 ntBASIC16.06■□□□□ 0.16
NUBP1P53384 AL008707.1-201ENST00000422498 534 ntBASIC16.06■□□□□ 0.16
NUBP1P53384 LINC01067-201ENST00000432575 664 ntTSL 3 BASIC16.06■□□□□ 0.16
NUBP1P53384 PTPA-217ENST00000434095 870 ntTSL 2 BASIC16.06■□□□□ 0.16
NUBP1P53384 PTPA-218ENST00000435132 618 ntTSL 2 BASIC16.06■□□□□ 0.16
NUBP1P53384 AL512271.1-201ENST00000439878 434 ntTSL 3 BASIC16.06■□□□□ 0.16
NUBP1P53384 AC092685.1-201ENST00000447960 1243 ntBASIC16.06■□□□□ 0.16
NUBP1P53384 TVP23BP2-201ENST00000455082 615 ntBASIC16.06■□□□□ 0.16
NUBP1P53384 LINC01192-207ENST00000492553 836 ntTSL 5 BASIC16.06■□□□□ 0.16
NUBP1P53384 AC129492.3-201ENST00000498285 460 ntAPPRIS P1 TSL 4 BASIC16.06■□□□□ 0.16
NUBP1P53384 AC005920.3-202ENST00000512717 789 ntTSL 3 BASIC16.06■□□□□ 0.16
NUBP1P53384 MTATP6P9-201ENST00000515039 680 ntBASIC16.06■□□□□ 0.16
NUBP1P53384 AC131902.1-201ENST00000521558 594 ntTSL 3 BASIC16.06■□□□□ 0.16
NUBP1P53384 GPRC5D-AS1-203ENST00000536029 466 ntTSL 3 BASIC16.06■□□□□ 0.16
NUBP1P53384 SPAG5-AS1-203ENST00000554154 491 ntTSL 2 BASIC16.06■□□□□ 0.16
NUBP1P53384 TM6SF1-207ENST00000565774 1020 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
NUBP1P53384 LINC02109-201ENST00000565798 869 ntTSL 5 BASIC16.06■□□□□ 0.16
NUBP1P53384 AC020763.1-201ENST00000567186 551 ntTSL 4 BASIC16.06■□□□□ 0.16
NUBP1P53384 AC110285.1-205ENST00000572301 559 ntTSL 3 BASIC16.06■□□□□ 0.16
NUBP1P53384 AC098850.3-201ENST00000577569 771 ntTSL 3 BASIC16.06■□□□□ 0.16
NUBP1P53384 SMARCE1-213ENST00000578044 1184 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
NUBP1P53384 SMARCE1-216ENST00000580419 1228 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
NUBP1P53384 AC104982.3-201ENST00000581995 514 ntBASIC16.06■□□□□ 0.16
NUBP1P53384 MIR5572-201ENST00000583188 137 ntBASIC16.06■□□□□ 0.16
NUBP1P53384 AC006557.1-201ENST00000591211 1085 ntBASIC16.06■□□□□ 0.16
NUBP1P53384 YIF1B-215ENST00000592246 936 ntTSL 3 BASIC16.06■□□□□ 0.16
NUBP1P53384 OR5H6-202ENST00000641416 1032 ntAPPRIS P1 BASIC16.06■□□□□ 0.16
NUBP1P53384 ADGRD2-201ENST00000334810 3244 ntAPPRIS P1 TSL 5 BASIC16.06■□□□□ 0.16
NUBP1P53384 PPP1R3F-202ENST00000376188 2443 ntTSL 2 BASIC16.06■□□□□ 0.16
NUBP1P53384 IL17RC-206ENST00000416074 2342 ntAPPRIS ALT2 TSL 1 (best) BASIC16.06■□□□□ 0.16
NUBP1P53384 ARHGAP28-203ENST00000383472 2295 ntAPPRIS ALT2 TSL 5 BASIC16.06■□□□□ 0.16
NUBP1P53384 INPP5J-205ENST00000404390 2215 ntAPPRIS P3 TSL 2 BASIC16.06■□□□□ 0.16
NUBP1P53384 C11orf24-201ENST00000304271 2063 ntAPPRIS P3 TSL 1 (best) BASIC16.06■□□□□ 0.16
NUBP1P53384 NEUROD2-201ENST00000302584 2041 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
NUBP1P53384 ZBTB14-202ENST00000400143 1814 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
NUBP1P53384 NMNAT3-203ENST00000413939 1711 ntTSL 2 BASIC16.05■□□□□ 0.16
NUBP1P53384 OGDH-204ENST00000443864 1744 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
NUBP1P53384 ISLR2-208ENST00000565159 2824 ntAPPRIS P1 TSL 3 BASIC16.05■□□□□ 0.16
NUBP1P53384 WT1-205ENST00000452863 2768 ntAPPRIS ALT2 TSL 1 (best) BASIC16.05■□□□□ 0.16
NUBP1P53384 IMPAD1-201ENST00000262644 7199 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
NUBP1P53384 KCNQ5-203ENST00000355635 6623 ntAPPRIS ALT1 TSL 5 BASIC16.05■□□□□ 0.16
NUBP1P53384 MBD3-201ENST00000156825 5518 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
NUBP1P53384 KLHDC10-201ENST00000335420 6437 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
NUBP1P53384 FDPS-202ENST00000368356 1431 ntAPPRIS P3 TSL 2 BASIC16.05■□□□□ 0.16
NUBP1P53384 CASC8-203ENST00000502082 1420 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
NUBP1P53384 RERG-209ENST00000546331 1383 ntTSL 2 BASIC16.05■□□□□ 0.16
NUBP1P53384 AURKA-202ENST00000347343 2248 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
NUBP1P53384 NAT8-201ENST00000272425 947 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
NUBP1P53384 VSIG2-201ENST00000326621 1148 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
NUBP1P53384 C9orf135-201ENST00000377197 873 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
NUBP1P53384 STPG3-201ENST00000388931 1207 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
NUBP1P53384 HAGH-202ENST00000397356 2984 ntAPPRIS P3 TSL 1 (best) BASIC16.05■□□□□ 0.16
NUBP1P53384 SMIM11A-203ENST00000399299 1033 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
NUBP1P53384 PEX13-203ENST00000414712 1014 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
NUBP1P53384 U82695.1-202ENST00000428676 700 ntTSL 2 BASIC16.05■□□□□ 0.16
NUBP1P53384 LINC02158-201ENST00000432377 897 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
NUBP1P53384 AL669970.3-201ENST00000435284 428 ntTSL 3 BASIC16.05■□□□□ 0.16
NUBP1P53384 MTX1P1-201ENST00000440904 838 ntBASIC16.05■□□□□ 0.16
NUBP1P53384 AL133466.1-201ENST00000447582 150 ntBASIC16.05■□□□□ 0.16
Retrieved 100 of 98,524 protein–RNA pairs in 30.8 ms