Protein–RNA interactions for Protein: P52945

PDX1, Pancreas/duodenum homeobox protein 1, humanhuman

Predictions only

Length 283 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDX1P52945 TMEM247-204ENST00000434431 680 ntAPPRIS P1 TSL 5 BASIC15.61■□□□□ 0.09
PDX1P52945 Z98749.2-207ENST00000443658 679 ntTSL 2 BASIC15.61■□□□□ 0.09
PDX1P52945 AC073130.2-202ENST00000444244 842 ntTSL 3 BASIC15.61■□□□□ 0.09
PDX1P52945 AL354710.2-201ENST00000468244 550 ntTSL 4 BASIC15.61■□□□□ 0.09
PDX1P52945 AC092910.3-202ENST00000469070 982 ntTSL 3 BASIC15.61■□□□□ 0.09
PDX1P52945 TMEM14B-212ENST00000475942 992 ntTSL 2 BASIC15.61■□□□□ 0.09
PDX1P52945 AC124067.4-202ENST00000522471 397 ntTSL 3 BASIC15.61■□□□□ 0.09
PDX1P52945 AC132938.2-201ENST00000579188 680 ntBASIC15.61■□□□□ 0.09
PDX1P52945 AC007431.3-201ENST00000623221 587 ntBASIC15.61■□□□□ 0.09
PDX1P52945 AL591163.1-201ENST00000641757 987 ntBASIC15.61■□□□□ 0.09
PDX1P52945 TSPOAP1-202ENST00000343736 5947 ntAPPRIS P3 TSL 1 (best) BASIC15.61■□□□□ 0.09
PDX1P52945 GFOD2-203ENST00000602377 1991 ntTSL 4 BASIC15.61■□□□□ 0.09
PDX1P52945 FBXO21-201ENST00000330622 2906 ntAPPRIS P3 TSL 1 (best) BASIC15.61■□□□□ 0.09
PDX1P52945 AC110813.1-201ENST00000507934 2209 ntTSL 2 BASIC15.61■□□□□ 0.09
PDX1P52945 LINC00612-201ENST00000538094 2213 ntTSL 2 BASIC15.61■□□□□ 0.09
PDX1P52945 RAD51D-218ENST00000590016 1528 ntTSL 2 BASIC15.61■□□□□ 0.09
PDX1P52945 CLCNKB-204ENST00000619181 1544 ntTSL 5 BASIC15.61■□□□□ 0.09
PDX1P52945 PRDM5-202ENST00000394435 2492 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
PDX1P52945 NR6A1-205ENST00000487099 7031 ntAPPRIS P3 TSL 1 (best) BASIC15.61■□□□□ 0.09
PDX1P52945 AL583722.1-201ENST00000540171 1307 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
PDX1P52945 PARP9-204ENST00000471785 3040 ntAPPRIS ALT2 TSL 2 BASIC15.61■□□□□ 0.09
PDX1P52945 PDE12-202ENST00000487257 3040 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
PDX1P52945 PLEKHA8P1-201ENST00000256692 1839 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
PDX1P52945 CES4A-206ENST00000540579 1825 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
PDX1P52945 SARS2-201ENST00000221431 2057 ntAPPRIS P2 TSL 1 (best) BASIC15.61■□□□□ 0.09
PDX1P52945 CCDC43-202ENST00000457422 2058 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
PDX1P52945 HIP1R-201ENST00000253083 4539 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
PDX1P52945 ZNF18-204ENST00000580306 2330 ntAPPRIS P3 TSL 2 BASIC15.61■□□□□ 0.09
PDX1P52945 B3GNT8-201ENST00000321702 1874 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
PDX1P52945 SLC10A3-203ENST00000393586 1893 ntTSL 5 BASIC15.61■□□□□ 0.09
PDX1P52945 SLC7A15P-201ENST00000424028 1363 ntBASIC15.61■□□□□ 0.09
PDX1P52945 USHBP1-203ENST00000431146 2136 ntTSL 2 BASIC15.61■□□□□ 0.09
PDX1P52945 KRT8P12-202ENST00000472924 1397 ntBASIC15.61■□□□□ 0.09
PDX1P52945 CD300LG-204ENST00000539718 1399 ntAPPRIS ALT2 TSL 1 (best) BASIC15.61■□□□□ 0.09
PDX1P52945 SLC1A6-208ENST00000598504 2987 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
PDX1P52945 NTRK1-202ENST00000368196 2701 ntAPPRIS ALT2 TSL 1 (best) BASIC15.6■□□□□ 0.09
PDX1P52945 FADS1-216ENST00000542506 1725 ntTSL 2 BASIC15.6■□□□□ 0.09
PDX1P52945 ZBTB45-202ENST00000594051 2541 ntAPPRIS P1 TSL 2 BASIC15.6■□□□□ 0.09
PDX1P52945 MINK1-202ENST00000355280 4961 ntAPPRIS P4 TSL 1 (best) BASIC15.6■□□□□ 0.09
PDX1P52945 STKLD1-201ENST00000371957 2825 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
PDX1P52945 ATXN7-213ENST00000538065 6842 ntAPPRIS ALT2 TSL 1 (best) BASIC15.6■□□□□ 0.09
PDX1P52945 CD276-213ENST00000561213 2690 ntAPPRIS ALT2 TSL 2 BASIC15.6■□□□□ 0.09
PDX1P52945 PHRF1-201ENST00000264555 5523 ntAPPRIS ALT2 TSL 1 (best) BASIC15.6■□□□□ 0.09
PDX1P52945 LCN15-201ENST00000316144 762 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
PDX1P52945 FOXR1-201ENST00000317011 1159 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
PDX1P52945 LCE3A-201ENST00000335674 270 ntAPPRIS P1 BASIC15.6■□□□□ 0.09
PDX1P52945 AC093423.3-201ENST00000370453 654 ntAPPRIS P1 TSL 5 BASIC15.6■□□□□ 0.09
PDX1P52945 AC079776.1-201ENST00000401540 1152 ntBASIC15.6■□□□□ 0.09
PDX1P52945 AL512384.1-201ENST00000406683 331 ntBASIC15.6■□□□□ 0.09
PDX1P52945 AC087499.6-201ENST00000411576 835 ntBASIC15.6■□□□□ 0.09
PDX1P52945 SPDYE17-201ENST00000412399 783 ntBASIC15.6■□□□□ 0.09
PDX1P52945 SERBP1P3-201ENST00000459980 809 ntBASIC15.6■□□□□ 0.09
PDX1P52945 RN7SL752P-201ENST00000463779 287 ntBASIC15.6■□□□□ 0.09
PDX1P52945 DNAJC19-208ENST00000486355 828 ntTSL 2 BASIC15.6■□□□□ 0.09
PDX1P52945 DNAJC19-209ENST00000491873 769 ntTSL 2 BASIC15.6■□□□□ 0.09
PDX1P52945 AC103957.2-201ENST00000521218 510 ntTSL 2 BASIC15.6■□□□□ 0.09
PDX1P52945 AC068228.2-201ENST00000522383 777 ntTSL 3 BASIC15.6■□□□□ 0.09
PDX1P52945 DCUN1D5-209ENST00000531543 1030 ntTSL 5 BASIC15.6■□□□□ 0.09
PDX1P52945 ACAP1-208ENST00000574499 412 ntTSL 2 BASIC15.6■□□□□ 0.09
PDX1P52945 C19orf70-206ENST00000590389 769 ntTSL 3 BASIC15.6■□□□□ 0.09
PDX1P52945 AC073389.2-202ENST00000607450 441 ntTSL 5 BASIC15.6■□□□□ 0.09
PDX1P52945 AL033527.5-202ENST00000641632 1098 ntBASIC15.6■□□□□ 0.09
PDX1P52945 NFIC-201ENST00000341919 1573 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
PDX1P52945 GLG1-202ENST00000422840 4748 ntAPPRIS ALT2 TSL 1 (best) BASIC15.6■□□□□ 0.09
PDX1P52945 MPL-202ENST00000413998 1887 ntAPPRIS ALT2 TSL 1 (best) BASIC15.6■□□□□ 0.09
PDX1P52945 IKBKE-204ENST00000584998 2487 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
PDX1P52945 MOV10L1-201ENST00000262794 3960 ntAPPRIS P3 TSL 1 (best) BASIC15.6■□□□□ 0.09
PDX1P52945 AARSD1-202ENST00000427569 1322 ntAPPRIS P1 TSL 5 BASIC15.6■□□□□ 0.09
PDX1P52945 BRD2-201ENST00000374825 4894 ntAPPRIS P3 TSL 1 (best) BASIC15.6■□□□□ 0.09
PDX1P52945 ZNF644-201ENST00000337393 5763 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
PDX1P52945 AC092143.3-201ENST00000565150 1900 ntTSL 5 BASIC15.6■□□□□ 0.09
PDX1P52945 AC026412.1-202ENST00000512335 2231 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
PDX1P52945 BTBD11-205ENST00000490090 4614 ntTSL 2 BASIC15.6■□□□□ 0.09
PDX1P52945 CHFR-203ENST00000432561 2648 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
PDX1P52945 ARMC5-203ENST00000457010 4844 ntAPPRIS P3 TSL 1 (best) BASIC15.6■□□□□ 0.09
PDX1P52945 SCN3B-202ENST00000392770 6061 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
PDX1P52945 TVP23B-202ENST00000476139 2989 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
PDX1P52945 TAF3-201ENST00000344293 4872 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
PDX1P52945 AC002310.1-201ENST00000457283 1445 ntTSL 2 BASIC15.6■□□□□ 0.09
PDX1P52945 AC006449.5-201ENST00000610658 2098 ntBASIC15.59■□□□□ 0.09
PDX1P52945 AL031731.1-201ENST00000642131 2094 ntBASIC15.59■□□□□ 0.09
PDX1P52945 GTPBP8-202ENST00000383677 1787 ntTSL 3 BASIC15.59■□□□□ 0.09
PDX1P52945 ARL14EP-201ENST00000282032 2430 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
PDX1P52945 GIMAP1-201ENST00000307194 4420 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
PDX1P52945 TAOK2-203ENST00000416441 4780 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
PDX1P52945 SLCO5A1-201ENST00000260126 9076 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
PDX1P52945 FAM49B-223ENST00000522746 2196 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
PDX1P52945 RAB33B-201ENST00000305626 4562 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
PDX1P52945 AC012414.7-201ENST00000621235 1507 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
PDX1P52945 RABEPK-206ENST00000628863 1537 ntTSL 5 BASIC15.59■□□□□ 0.09
PDX1P52945 GRIN2C-202ENST00000347612 2929 ntAPPRIS ALT2 TSL 1 (best) BASIC15.59■□□□□ 0.09
PDX1P52945 LMNB2-201ENST00000325327 4671 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
PDX1P52945 SNAPC4-201ENST00000298532 5010 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
PDX1P52945 RHCE-201ENST00000294413 1591 ntAPPRIS P2 TSL 1 (best) BASIC15.59■□□□□ 0.09
PDX1P52945 AC092364.2-201ENST00000596710 2692 ntBASIC15.59■□□□□ 0.09
PDX1P52945 AL512625.3-203ENST00000445604 1602 ntTSL 5 BASIC15.59■□□□□ 0.09
PDX1P52945 LEF1-201ENST00000265165 3068 ntAPPRIS P3 TSL 1 (best) BASIC15.59■□□□□ 0.09
PDX1P52945 TRIM11-201ENST00000284551 2715 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
PDX1P52945 DKKL1-201ENST00000221498 1222 ntAPPRIS P2 TSL 1 (best) BASIC15.59■□□□□ 0.09
PDX1P52945 C1orf68-201ENST00000368775 949 ntAPPRIS P1 BASIC15.59■□□□□ 0.09
Retrieved 100 of 98,524 protein–RNA pairs in 28.3 ms