Protein–RNA interactions for Protein: P42695

NCAPD3, Condensin-2 complex subunit D3, humanhuman

Predictions only

Length 1,498 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NCAPD3P42695 COX6A1P2-201ENST00000620597 330 ntBASIC27.64■■■□□ 2.02
NCAPD3P42695 TRIML1-201ENST00000332517 1797 ntAPPRIS P1 TSL 1 (best) BASIC27.64■■■□□ 2.02
NCAPD3P42695 MEG3-206ENST00000423456 1771 ntTSL 2 BASIC27.64■■■□□ 2.02
NCAPD3P42695 KCNC2-203ENST00000393288 2485 ntAPPRIS ALT2 TSL 1 (best) BASIC27.64■■■□□ 2.02
NCAPD3P42695 TFEB-201ENST00000230323 2354 ntAPPRIS P1 TSL 1 (best) BASIC27.64■■■□□ 2.02
NCAPD3P42695 ZNF211-203ENST00000299871 2577 ntAPPRIS ALT2 TSL 3 BASIC27.64■■■□□ 2.01
NCAPD3P42695 PKLR-201ENST00000342741 2083 ntTSL 1 (best) BASIC27.64■■■□□ 2.01
NCAPD3P42695 PSMB6-201ENST00000270586 852 ntAPPRIS P1 TSL 1 (best) BASIC27.64■■■□□ 2.01
NCAPD3P42695 LAMTOR4-201ENST00000341942 605 ntAPPRIS P1 TSL 1 (best) BASIC27.64■■■□□ 2.01
NCAPD3P42695 AL139094.1-201ENST00000405549 1188 ntBASIC27.64■■■□□ 2.01
NCAPD3P42695 LINC01237-201ENST00000415434 573 ntTSL 4 BASIC27.64■■■□□ 2.01
NCAPD3P42695 NREP-204ENST00000419114 704 ntAPPRIS P1 TSL 2 BASIC27.64■■■□□ 2.01
NCAPD3P42695 EIF3FP3-201ENST00000434851 1086 ntBASIC27.64■■■□□ 2.01
NCAPD3P42695 MLF1-206ENST00000471745 1266 ntTSL 2 BASIC27.64■■■□□ 2.01
NCAPD3P42695 LILRA5-204ENST00000486742 1078 ntAPPRIS ALT2 TSL 1 (best) BASIC27.64■■■□□ 2.01
NCAPD3P42695 RPL23A-206ENST00000496182 636 ntTSL 3 BASIC27.64■■■□□ 2.01
NCAPD3P42695 AL391280.1-201ENST00000506969 1062 ntBASIC27.64■■■□□ 2.01
NCAPD3P42695 AL135838.1-202ENST00000556411 441 ntTSL 2 BASIC27.64■■■□□ 2.01
NCAPD3P42695 MIR4783-201ENST00000580343 82 ntBASIC27.64■■■□□ 2.01
NCAPD3P42695 PSMB6-205ENST00000614486 871 ntTSL 2 BASIC27.64■■■□□ 2.01
NCAPD3P42695 SBNO2-201ENST00000361757 4923 ntAPPRIS P4 TSL 1 (best) BASIC27.63■■■□□ 2.01
NCAPD3P42695 ATP6AP2-215ENST00000636409 1962 ntAPPRIS ALT2 TSL 2 BASIC27.63■■■□□ 2.01
NCAPD3P42695 PPP1R16A-202ENST00000435887 2273 ntAPPRIS P1 TSL 1 (best) BASIC27.63■■■□□ 2.01
NCAPD3P42695 AC104667.2-202ENST00000452801 1301 ntTSL 2 BASIC27.63■■■□□ 2.01
NCAPD3P42695 SLC41A3-203ENST00000360370 2169 ntAPPRIS ALT2 TSL 1 (best) BASIC27.63■■■□□ 2.01
NCAPD3P42695 ZNF619-205ENST00000456778 2192 ntTSL 2 BASIC27.63■■■□□ 2.01
NCAPD3P42695 FAM109A-204ENST00000548163 2317 ntAPPRIS P3 TSL 2 BASIC27.63■■■□□ 2.01
NCAPD3P42695 STK4-AS1-201ENST00000434401 2065 ntTSL 2 BASIC27.63■■■□□ 2.01
NCAPD3P42695 CALCOCO2-211ENST00000508679 1396 ntTSL 2 BASIC27.63■■■□□ 2.01
NCAPD3P42695 AL355493.2-201ENST00000568270 1395 ntTSL 1 (best) BASIC27.63■■■□□ 2.01
NCAPD3P42695 FUT8-213ENST00000557164 2269 ntTSL 2 BASIC27.63■■■□□ 2.01
NCAPD3P42695 FGFR2-224ENST00000613048 4369 ntTSL 5 BASIC27.63■■■□□ 2.01
NCAPD3P42695 SRP14-201ENST00000267884 1077 ntAPPRIS P1 TSL 1 (best) BASIC27.63■■■□□ 2.01
NCAPD3P42695 RAB36-202ENST00000341989 936 ntTSL 1 (best) BASIC27.63■■■□□ 2.01
NCAPD3P42695 CD8B-204ENST00000393759 1096 ntTSL 1 (best) BASIC27.63■■■□□ 2.01
NCAPD3P42695 KRT8P14-201ENST00000414254 1442 ntBASIC27.63■■■□□ 2.01
NCAPD3P42695 CMC1-204ENST00000423894 549 ntTSL 2 BASIC27.63■■■□□ 2.01
NCAPD3P42695 AC006453.1-201ENST00000636037 1257 ntBASIC27.63■■■□□ 2.01
NCAPD3P42695 THEM4-201ENST00000368814 2377 ntAPPRIS P1 TSL 1 (best) BASIC27.62■■■□□ 2.01
NCAPD3P42695 NSUN5-202ENST00000310326 1602 ntAPPRIS ALT2 TSL 2 BASIC27.62■■■□□ 2.01
NCAPD3P42695 ARV1-201ENST00000310256 1335 ntAPPRIS P1 TSL 1 (best) BASIC27.62■■■□□ 2.01
NCAPD3P42695 TLE2-204ENST00000455444 2253 ntTSL 5 BASIC27.62■■■□□ 2.01
NCAPD3P42695 YTHDF3-214ENST00000621890 2296 ntTSL 5 BASIC27.62■■■□□ 2.01
NCAPD3P42695 ACVR1B-201ENST00000257963 4563 ntAPPRIS P1 TSL 1 (best) BASIC27.62■■■□□ 2.01
NCAPD3P42695 EOMES-202ENST00000449599 2829 ntTSL 1 (best) BASIC27.62■■■□□ 2.01
NCAPD3P42695 SH3PXD2B-203ENST00000519643 1394 ntTSL 1 (best) BASIC27.62■■■□□ 2.01
NCAPD3P42695 DLX4-201ENST00000240306 2034 ntAPPRIS P1 TSL 1 (best) BASIC27.62■■■□□ 2.01
NCAPD3P42695 ESR2-205ENST00000358599 1899 ntTSL 2 BASIC27.62■■■□□ 2.01
NCAPD3P42695 SHISA5-210ENST00000444115 2081 ntTSL 2 BASIC27.62■■■□□ 2.01
NCAPD3P42695 UNC119-204ENST00000470125 2050 ntTSL 1 (best) BASIC27.62■■■□□ 2.01
NCAPD3P42695 LHCGR-203ENST00000403273 1921 ntTSL 5 BASIC27.62■■■□□ 2.01
NCAPD3P42695 KDSR-201ENST00000326575 1024 ntTSL 2 BASIC27.62■■■□□ 2.01
NCAPD3P42695 CNR1-201ENST00000362094 1252 ntTSL 1 (best) BASIC27.62■■■□□ 2.01
NCAPD3P42695 MRPL55-214ENST00000366741 603 ntAPPRIS P1 TSL 2 BASIC27.62■■■□□ 2.01
NCAPD3P42695 MRPL55-218ENST00000366747 603 ntAPPRIS P1 TSL 1 (best) BASIC27.62■■■□□ 2.01
NCAPD3P42695 IGHV3-49-201ENST00000390625 439 ntAPPRIS P1 BASIC27.62■■■□□ 2.01
NCAPD3P42695 FGFR3P1-201ENST00000449999 601 ntBASIC27.62■■■□□ 2.01
NCAPD3P42695 NOC2LP1-201ENST00000450578 752 ntBASIC27.62■■■□□ 2.01
NCAPD3P42695 AGTRAP-206ENST00000452018 809 ntTSL 2 BASIC27.62■■■□□ 2.01
NCAPD3P42695 TMEM14B-210ENST00000473276 730 ntTSL 3 BASIC27.62■■■□□ 2.01
NCAPD3P42695 NME2-204ENST00000503064 749 ntAPPRIS P1 TSL 1 (best) BASIC27.62■■■□□ 2.01
NCAPD3P42695 AC113383.1-201ENST00000514696 582 ntTSL 4 BASIC27.62■■■□□ 2.01
NCAPD3P42695 AC242376.1-201ENST00000559033 726 ntBASIC27.62■■■□□ 2.01
NCAPD3P42695 CRHR1-208ENST00000577353 1206 ntTSL 1 (best) BASIC27.62■■■□□ 2.01
NCAPD3P42695 AC020922.3-201ENST00000595064 547 ntBASIC27.62■■■□□ 2.01
NCAPD3P42695 OR10B1P-201ENST00000601666 907 ntBASIC27.62■■■□□ 2.01
NCAPD3P42695 MBD3L2B-202ENST00000637800 774 ntAPPRIS P1 TSL 1 (best) BASIC27.62■■■□□ 2.01
NCAPD3P42695 AL805961.1-203ENST00000641078 1258 ntBASIC27.62■■■□□ 2.01
NCAPD3P42695 TDP2-202ENST00000378198 2071 ntAPPRIS P2 TSL 1 (best) BASIC27.61■■■□□ 2.01
NCAPD3P42695 ZNF274-202ENST00000345813 2678 ntAPPRIS ALT2 TSL 1 (best) BASIC27.61■■■□□ 2.01
NCAPD3P42695 BANK1-207ENST00000508653 2115 ntTSL 1 (best) BASIC27.61■■■□□ 2.01
NCAPD3P42695 GNG2-213ENST00000556766 2125 ntAPPRIS P1 TSL 1 (best) BASIC27.61■■■□□ 2.01
NCAPD3P42695 DARS-AS1-209ENST00000594219 1420 ntTSL 5 BASIC27.61■■■□□ 2.01
NCAPD3P42695 MIR155HG-201ENST00000456917 1600 ntTSL 5 BASIC27.61■■■□□ 2.01
NCAPD3P42695 CELA3B-201ENST00000337107 897 ntAPPRIS P1 TSL 1 (best) BASIC27.61■■■□□ 2.01
NCAPD3P42695 C1orf53-201ENST00000367393 588 ntAPPRIS P1 TSL 1 (best) BASIC27.61■■■□□ 2.01
NCAPD3P42695 AL136309.1-201ENST00000403917 691 ntBASIC27.61■■■□□ 2.01
NCAPD3P42695 CR769775.1-201ENST00000443347 931 ntTSL 3 BASIC27.61■■■□□ 2.01
NCAPD3P42695 PABPC5-AS1-201ENST00000456187 426 ntTSL 5 BASIC27.61■■■□□ 2.01
NCAPD3P42695 AC106794.1-201ENST00000506935 792 ntBASIC27.61■■■□□ 2.01
NCAPD3P42695 PTPRO-209ENST00000543886 2070 ntTSL 1 (best) BASIC27.61■■■□□ 2.01
NCAPD3P42695 ANKS3-201ENST00000304283 2662 ntAPPRIS P1 TSL 2 BASIC27.61■■■□□ 2.01
NCAPD3P42695 CMPK2-201ENST00000256722 2884 ntAPPRIS P3 TSL 1 (best) BASIC27.61■■■□□ 2.01
NCAPD3P42695 SLC2A6-202ENST00000371899 2528 ntAPPRIS P1 TSL 1 (best) BASIC27.61■■■□□ 2.01
NCAPD3P42695 KAAG1-201ENST00000274766 1382 ntAPPRIS P1 BASIC27.61■■■□□ 2.01
NCAPD3P42695 U2AF2-201ENST00000308924 1698 ntAPPRIS P3 TSL 1 (best) BASIC27.6■■■□□ 2.01
NCAPD3P42695 FAM32A-201ENST00000263384 1455 ntAPPRIS P1 TSL 1 (best) BASIC27.6■■■□□ 2.01
NCAPD3P42695 FGF1-201ENST00000337706 1469 ntAPPRIS P1 TSL 2 BASIC27.6■■■□□ 2.01
NCAPD3P42695 MPV17-201ENST00000233545 998 ntAPPRIS P1 TSL 1 (best) BASIC27.6■■■□□ 2.01
NCAPD3P42695 C1QB-201ENST00000314933 1044 ntTSL 1 (best) BASIC27.6■■■□□ 2.01
NCAPD3P42695 VAMP8-203ENST00000432071 664 ntTSL 3 BASIC27.6■■■□□ 2.01
NCAPD3P42695 AC006335.1-201ENST00000445200 547 ntBASIC27.6■■■□□ 2.01
NCAPD3P42695 GLYCTK-204ENST00000471180 992 ntTSL 2 BASIC27.6■■■□□ 2.01
NCAPD3P42695 KCNK16-205ENST00000507712 889 ntTSL 3 BASIC27.6■■■□□ 2.01
NCAPD3P42695 WT1-AS_6.1-201ENST00000614919 121 ntBASIC27.6■■■□□ 2.01
NCAPD3P42695 AC068587.8-201ENST00000641239 219 ntBASIC27.6■■■□□ 2.01
NCAPD3P42695 PHF1-201ENST00000374512 2224 ntTSL 1 (best) BASIC27.6■■■□□ 2.01
NCAPD3P42695 SQOR-208ENST00000568606 1792 ntAPPRIS P1 TSL 5 BASIC27.6■■■□□ 2.01
NCAPD3P42695 LINC01118-203ENST00000479311 1588 ntTSL 1 (best) BASIC27.6■■■□□ 2.01
NCAPD3P42695 CFAP36-201ENST00000339012 1373 ntTSL 1 (best) BASIC27.6■■■□□ 2.01
Retrieved 100 of 98,524 protein–RNA pairs in 27 ms