Protein–RNA interactions for Protein: P29353

SHC1, SHC-transforming protein 1, humanhuman

Predictions only

Length 583 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHC1P29353 MRPL49-201ENST00000279242 2019 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
SHC1P29353 EPB41L3-202ENST00000342933 4270 ntAPPRIS ALT2 TSL 5 BASIC14.8□□□□□ -0.04
SHC1P29353 CEP19-202ENST00000409690 2201 ntAPPRIS P2 TSL 1 (best) BASIC14.8□□□□□ -0.04
SHC1P29353 CLEC18A-209ENST00000615430 2215 ntAPPRIS P2 TSL 5 BASIC14.8□□□□□ -0.04
SHC1P29353 CLEC18C-211ENST00000618957 2215 ntAPPRIS P2 TSL 5 BASIC14.8□□□□□ -0.04
SHC1P29353 CLEC18B-205ENST00000619275 2215 ntAPPRIS ALT2 TSL 5 BASIC14.8□□□□□ -0.04
SHC1P29353 FEN1-201ENST00000305885 2296 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
SHC1P29353 DIO3OS-208ENST00000556120 2473 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
SHC1P29353 TPM2-201ENST00000329305 1018 ntAPPRIS ALT1 TSL 2 BASIC14.8□□□□□ -0.04
SHC1P29353 YIF1B-201ENST00000329420 964 ntTSL 3 BASIC14.8□□□□□ -0.04
SHC1P29353 PRUNE2-202ENST00000376713 1069 ntTSL 5 BASIC14.8□□□□□ -0.04
SHC1P29353 FBXO44-205ENST00000376768 959 ntTSL 2 BASIC14.8□□□□□ -0.04
SHC1P29353 AC254562.1-201ENST00000417586 456 ntBASIC14.8□□□□□ -0.04
SHC1P29353 FAM58DP-201ENST00000428076 619 ntBASIC14.8□□□□□ -0.04
SHC1P29353 AL162431.1-201ENST00000434447 543 ntTSL 3 BASIC14.8□□□□□ -0.04
SHC1P29353 IRF3-204ENST00000442265 315 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
SHC1P29353 NECTIN3-AS1-204ENST00000476301 568 ntTSL 4 BASIC14.8□□□□□ -0.04
SHC1P29353 AC026191.1-201ENST00000491930 829 ntTSL 3 BASIC14.8□□□□□ -0.04
SHC1P29353 RIMS4-202ENST00000541604 1036 ntAPPRIS ALT1 TSL 1 (best) BASIC14.8□□□□□ -0.04
SHC1P29353 AC243965.1-201ENST00000557595 781 ntTSL 3 BASIC14.8□□□□□ -0.04
SHC1P29353 FAM227B-204ENST00000558594 1139 ntAPPRIS ALT2 TSL 5 BASIC14.8□□□□□ -0.04
SHC1P29353 QPRT-203ENST00000562473 579 ntTSL 3 BASIC14.8□□□□□ -0.04
SHC1P29353 GNAO1-210ENST00000569295 930 ntTSL 2 BASIC14.8□□□□□ -0.04
SHC1P29353 AP001160.2-201ENST00000596071 487 ntBASIC14.8□□□□□ -0.04
SHC1P29353 AC008267.7-201ENST00000624570 1194 ntBASIC14.8□□□□□ -0.04
SHC1P29353 LATS1-202ENST00000392273 2567 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
SHC1P29353 PRKD2-216ENST00000601806 2906 ntAPPRIS ALT2 TSL 5 BASIC14.8□□□□□ -0.04
SHC1P29353 TEKT4P2-201ENST00000416067 1599 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
SHC1P29353 AKR1B15-202ENST00000457545 1621 ntAPPRIS P1 TSL 5 BASIC14.8□□□□□ -0.04
SHC1P29353 FLAD1-203ENST00000315144 1730 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
SHC1P29353 AC005622.1-201ENST00000636801 1703 ntBASIC14.8□□□□□ -0.04
SHC1P29353 MAGI1-216ENST00000497477 3555 ntTSL 5 BASIC14.8□□□□□ -0.04
SHC1P29353 BMP4-201ENST00000245451 1917 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
SHC1P29353 TAF1D-203ENST00000448108 2082 ntAPPRIS P1 TSL 5 BASIC14.8□□□□□ -0.04
SHC1P29353 BECN1-213ENST00000590099 2087 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
SHC1P29353 WDTC1-202ENST00000361771 4275 ntAPPRIS P3 TSL 1 (best) BASIC14.8□□□□□ -0.04
SHC1P29353 SLC30A5-202ENST00000396591 4360 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
SHC1P29353 ASNS-201ENST00000175506 2356 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
SHC1P29353 ZNF671-201ENST00000317398 2431 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
SHC1P29353 SUPT20HL2-201ENST00000486479 2409 ntBASIC14.8□□□□□ -0.04
SHC1P29353 MYRIP-202ENST00000396217 4877 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
SHC1P29353 CYP2U1-201ENST00000332884 4944 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
SHC1P29353 GPR161-204ENST00000367838 2676 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
SHC1P29353 COX10-201ENST00000261643 2873 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
SHC1P29353 NFE2L2-201ENST00000397062 2853 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
SHC1P29353 DBN1-202ENST00000309007 2995 ntAPPRIS ALT2 TSL 1 (best) BASIC14.79□□□□□ -0.04
SHC1P29353 NPHP4-211ENST00000622020 3004 ntTSL 5 BASIC14.79□□□□□ -0.04
SHC1P29353 EIF4G3-212ENST00000602326 6196 ntAPPRIS ALT2 TSL 1 (best) BASIC14.79□□□□□ -0.04
SHC1P29353 TMEM184A-201ENST00000297477 6276 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
SHC1P29353 ARHGEF1-219ENST00000599846 3393 ntAPPRIS ALT2 TSL 5 BASIC14.79□□□□□ -0.04
SHC1P29353 NCOA6-206ENST00000612493 4082 ntAPPRIS ALT2 TSL 5 BASIC14.79□□□□□ -0.04
SHC1P29353 SF3A2-201ENST00000221494 1963 ntAPPRIS P2 TSL 1 (best) BASIC14.79□□□□□ -0.04
SHC1P29353 NKG7-201ENST00000221978 843 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
SHC1P29353 COQ8B-201ENST00000243583 2041 ntAPPRIS ALT2 TSL 1 (best) BASIC14.79□□□□□ -0.04
SHC1P29353 N4BP1-201ENST00000262384 7106 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
SHC1P29353 P3H1-202ENST00000296388 2585 ntAPPRIS P3 TSL 1 (best) BASIC14.79□□□□□ -0.04
SHC1P29353 TMEM40-202ENST00000314124 2308 ntAPPRIS P3 TSL 2 BASIC14.79□□□□□ -0.04
SHC1P29353 RNF151-201ENST00000321392 786 ntAPPRIS ALT2 TSL 1 (best) BASIC14.79□□□□□ -0.04
SHC1P29353 C10orf107-201ENST00000330194 1685 ntAPPRIS P2 TSL 1 (best) BASIC14.79□□□□□ -0.04
SHC1P29353 DUSP18-201ENST00000334679 2479 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
SHC1P29353 TMEM205-201ENST00000354882 1034 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
SHC1P29353 SCP2-201ENST00000371509 1889 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
SHC1P29353 C1QC-202ENST00000374639 1183 ntAPPRIS P1 TSL 2 BASIC14.79□□□□□ -0.04
SHC1P29353 ACTL8-201ENST00000375406 1861 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
SHC1P29353 TEX30-202ENST00000376021 1038 ntTSL 2 BASIC14.79□□□□□ -0.04
SHC1P29353 HIST1H2AC-202ENST00000377791 1654 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
SHC1P29353 MRS2-202ENST00000378353 1740 ntAPPRIS ALT2 TSL 1 (best) BASIC14.79□□□□□ -0.04
SHC1P29353 CRLF2-202ENST00000381567 1013 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
SHC1P29353 SLC26A1-202ENST00000398516 3109 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
SHC1P29353 SH3YL1-206ENST00000405430 2064 ntAPPRIS P1 TSL 5 BASIC14.79□□□□□ -0.04
SHC1P29353 LINC00398-201ENST00000414407 906 ntTSL 2 BASIC14.79□□□□□ -0.04
SHC1P29353 AL627223.1-201ENST00000416693 442 ntBASIC14.79□□□□□ -0.04
SHC1P29353 LRRFIP2-205ENST00000421276 2522 ntTSL 2 BASIC14.79□□□□□ -0.04
SHC1P29353 SAPCD1-209ENST00000425424 820 ntAPPRIS ALT2 TSL 5 BASIC14.79□□□□□ -0.04
SHC1P29353 AC142381.1-201ENST00000426099 345 ntBASIC14.79□□□□□ -0.04
SHC1P29353 MBD4-203ENST00000429544 2478 ntAPPRIS ALT2 TSL 1 (best) BASIC14.79□□□□□ -0.04
SHC1P29353 AC005237.2-201ENST00000434368 219 ntBASIC14.79□□□□□ -0.04
SHC1P29353 IL32-206ENST00000440815 920 ntAPPRIS P4 TSL 2 BASIC14.79□□□□□ -0.04
SHC1P29353 IL32-207ENST00000444393 892 ntAPPRIS P4 TSL 2 BASIC14.79□□□□□ -0.04
SHC1P29353 NDUFB2-202ENST00000460088 420 ntTSL 3 BASIC14.79□□□□□ -0.04
SHC1P29353 AGGF1-204ENST00000506806 1142 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
SHC1P29353 SNHG18-201ENST00000508179 1799 ntTSL 2 BASIC14.79□□□□□ -0.04
SHC1P29353 RPS3A-212ENST00000514682 985 ntTSL 5 BASIC14.79□□□□□ -0.04
SHC1P29353 IGHV3-62-201ENST00000520057 340 ntBASIC14.79□□□□□ -0.04
SHC1P29353 NOX4-207ENST00000525196 1555 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
SHC1P29353 IL32-219ENST00000531965 746 ntAPPRIS ALT2 TSL 1 (best) BASIC14.79□□□□□ -0.04
SHC1P29353 IL32-223ENST00000534507 1112 ntAPPRIS ALT2 TSL 2 BASIC14.79□□□□□ -0.04
SHC1P29353 IL32-226ENST00000548476 1014 ntAPPRIS ALT2 TSL 2 BASIC14.79□□□□□ -0.04
SHC1P29353 IL32-227ENST00000548652 812 ntAPPRIS ALT2 TSL 3 BASIC14.79□□□□□ -0.04
SHC1P29353 TUBB8-201ENST00000561967 1413 ntTSL 5 BASIC14.79□□□□□ -0.04
SHC1P29353 SNHG9-202ENST00000564014 471 ntBASIC14.79□□□□□ -0.04
SHC1P29353 AP000842.3-202ENST00000569238 1080 ntBASIC14.79□□□□□ -0.04
SHC1P29353 RNF151-203ENST00000569714 796 ntAPPRIS P2 TSL 1 (best) BASIC14.79□□□□□ -0.04
SHC1P29353 CIRBP-204ENST00000585630 870 ntAPPRIS P3 TSL 3 BASIC14.79□□□□□ -0.04
SHC1P29353 TMEM205-205ENST00000586590 677 ntAPPRIS P1 TSL 5 BASIC14.79□□□□□ -0.04
SHC1P29353 TMEM205-207ENST00000586956 1003 ntAPPRIS P1 TSL 2 BASIC14.79□□□□□ -0.04
SHC1P29353 SSH2-211ENST00000590153 570 ntTSL 4 BASIC14.79□□□□□ -0.04
SHC1P29353 UXT-AS1-201ENST00000590504 1525 ntBASIC14.79□□□□□ -0.04
SHC1P29353 GRIK5-204ENST00000593562 3308 ntAPPRIS P1 TSL 5 BASIC14.79□□□□□ -0.04
SHC1P29353 AC073389.1-201ENST00000595595 795 ntBASIC14.79□□□□□ -0.04
Retrieved 100 of 98,524 protein–RNA pairs in 45.2 ms