Protein–RNA interactions for Protein: P26640

VARS, Valine--tRNA ligase, humanhuman

Known RBP Predictions only

Length 1,264 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VARSP26640 ATP23-201ENST00000300145 1245 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
VARSP26640 ANO1-201ENST00000316296 2118 ntTSL 2 BASIC15.9■□□□□ 0.14
VARSP26640 ETNK1-202ENST00000335148 1083 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
VARSP26640 NEK7-201ENST00000367383 586 ntTSL 2 BASIC15.9■□□□□ 0.14
VARSP26640 PIK3CD-AS2-201ENST00000415330 939 ntTSL 5 BASIC15.9■□□□□ 0.14
VARSP26640 FLYWCH2-203ENST00000572006 754 ntAPPRIS ALT2 TSL 2 BASIC15.9■□□□□ 0.14
VARSP26640 CROCCP3-203ENST00000589964 255 ntTSL 3 BASIC15.9■□□□□ 0.14
VARSP26640 EXT2-210ENST00000533608 3136 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
VARSP26640 ADAMTS1-201ENST00000284984 5191 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
VARSP26640 CABP1-204ENST00000453000 1857 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
VARSP26640 REXO1L8P-201ENST00000604378 1897 ntBASIC15.9■□□□□ 0.14
VARSP26640 SFRP2-201ENST00000274063 2032 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
VARSP26640 TPD52L2-205ENST00000352482 2339 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
VARSP26640 FES-204ENST00000414248 2327 ntTSL 2 BASIC15.9■□□□□ 0.14
VARSP26640 TPD52L2-210ENST00000615907 2310 ntTSL 4 BASIC15.9■□□□□ 0.14
VARSP26640 FERMT3-201ENST00000279227 2489 ntAPPRIS P4 TSL 1 (best) BASIC15.9■□□□□ 0.14
VARSP26640 FERMT3-202ENST00000345728 2481 ntAPPRIS ALT1 TSL 1 (best) BASIC15.9■□□□□ 0.14
VARSP26640 BMP1-201ENST00000306349 2626 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
VARSP26640 DMTN-202ENST00000358242 2772 ntTSL 5 BASIC15.9■□□□□ 0.14
VARSP26640 CACNA2D3-201ENST00000288197 3671 ntAPPRIS ALT2 TSL 1 (best) BASIC15.9■□□□□ 0.14
VARSP26640 CACNA2D3-206ENST00000474759 3675 ntAPPRIS P2 TSL 1 (best) BASIC15.9■□□□□ 0.14
VARSP26640 FBP1-201ENST00000375326 1462 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
VARSP26640 CAMKV-204ENST00000466940 1475 ntTSL 2 BASIC15.9■□□□□ 0.14
VARSP26640 DYM-201ENST00000269445 5049 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
VARSP26640 ZMYND12-201ENST00000372565 1775 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
VARSP26640 COG5-203ENST00000393603 5418 ntAPPRIS ALT2 TSL 1 (best) BASIC15.89■□□□□ 0.14
VARSP26640 AC006063.2-201ENST00000640161 1696 ntTSL 5 BASIC15.89■□□□□ 0.13
VARSP26640 AC105339.1-201ENST00000440089 1362 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
VARSP26640 SIRT6-214ENST00000601488 1361 ntTSL 3 BASIC15.89■□□□□ 0.13
VARSP26640 CLUH-202ENST00000570628 5244 ntAPPRIS P2 TSL 2 BASIC15.89■□□□□ 0.13
VARSP26640 LRRC20-206ENST00000395011 2903 ntTSL 4 BASIC15.89■□□□□ 0.13
VARSP26640 FBXO21-208ENST00000622495 6040 ntAPPRIS ALT1 TSL 1 (best) BASIC15.89■□□□□ 0.13
VARSP26640 ISG20L2-202ENST00000368219 2310 ntAPPRIS P1 TSL 5 BASIC15.89■□□□□ 0.13
VARSP26640 CLEC18B-201ENST00000339953 1865 ntAPPRIS P2 TSL 1 (best) BASIC15.89■□□□□ 0.13
VARSP26640 CLEC18C-202ENST00000536907 1865 ntAPPRIS ALT2 TSL 5 BASIC15.89■□□□□ 0.13
VARSP26640 PDZRN3-201ENST00000263666 4248 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
VARSP26640 SLK-201ENST00000335753 7673 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
VARSP26640 AC005622.1-201ENST00000636801 1703 ntBASIC15.89■□□□□ 0.13
VARSP26640 POU2F2-207ENST00000529067 2657 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
VARSP26640 C1RL-210ENST00000544702 1569 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
VARSP26640 POR-218ENST00000461988 2522 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
VARSP26640 USH1C-202ENST00000318024 2237 ntAPPRIS ALT2 TSL 1 (best) BASIC15.89■□□□□ 0.13
VARSP26640 CA4-201ENST00000300900 1154 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
VARSP26640 CD82-202ENST00000342935 967 ntTSL 5 BASIC15.89■□□□□ 0.13
VARSP26640 GPX7-201ENST00000361314 1228 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
VARSP26640 CSNK2B-203ENST00000375882 948 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
VARSP26640 UBE2F-202ENST00000409332 1138 ntTSL 5 BASIC15.89■□□□□ 0.13
VARSP26640 DARS-AS1-203ENST00000438432 768 ntTSL 3 BASIC15.89■□□□□ 0.13
VARSP26640 LINC00899-202ENST00000444890 493 ntTSL 3 BASIC15.89■□□□□ 0.13
VARSP26640 POU5F1P6-201ENST00000466990 990 ntBASIC15.89■□□□□ 0.13
VARSP26640 TIMM17B-208ENST00000495490 939 ntTSL 5 BASIC15.89■□□□□ 0.13
VARSP26640 HILS1-201ENST00000504307 1219 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
VARSP26640 AC132872.1-201ENST00000566986 1195 ntBASIC15.89■□□□□ 0.13
VARSP26640 PMF1-BGLAP-204ENST00000567140 655 ntTSL 3 BASIC15.89■□□□□ 0.13
VARSP26640 TMEM88-202ENST00000574668 510 ntTSL 2 BASIC15.89■□□□□ 0.13
VARSP26640 AL078644.1-201ENST00000609881 752 ntBASIC15.89■□□□□ 0.13
VARSP26640 PELP1-208ENST00000572293 5272 ntAPPRIS P2 TSL 1 (best) BASIC15.89■□□□□ 0.13
VARSP26640 ATP6V0E2-212ENST00000611515 2565 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
VARSP26640 TAX1BP1-201ENST00000265393 2478 ntAPPRIS ALT2 TSL 1 (best) BASIC15.89■□□□□ 0.13
VARSP26640 GGT6-204ENST00000574154 2482 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
VARSP26640 DYRK3-201ENST00000367106 2329 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
VARSP26640 NPY5R-203ENST00000515560 3183 ntAPPRIS P1 TSL 2 BASIC15.89■□□□□ 0.13
VARSP26640 CCT2-202ENST00000543146 2189 ntTSL 2 BASIC15.89■□□□□ 0.13
VARSP26640 MCF2L2-208ENST00000473233 4748 ntAPPRIS ALT2 TSL 5 BASIC15.89■□□□□ 0.13
VARSP26640 ANKMY1-207ENST00000403283 2874 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
VARSP26640 NFAM1-201ENST00000329021 5602 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
VARSP26640 MANSC1-201ENST00000396349 2220 ntTSL 2 BASIC15.88■□□□□ 0.13
VARSP26640 BIRC7-201ENST00000217169 1368 ntAPPRIS P4 TSL 1 (best) BASIC15.88■□□□□ 0.13
VARSP26640 MARVELD3-204ENST00000565261 1351 ntAPPRIS ALT2 TSL 1 (best) BASIC15.88■□□□□ 0.13
VARSP26640 ZNF671-201ENST00000317398 2431 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
VARSP26640 BANP-203ENST00000393207 2438 ntTSL 2 BASIC15.88■□□□□ 0.13
VARSP26640 ZFAND5-205ENST00000376962 2785 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
VARSP26640 PCDH1-203ENST00000394536 3827 ntAPPRIS ALT2 TSL 1 (best) BASIC15.88■□□□□ 0.13
VARSP26640 PTPRN2-201ENST00000389413 4723 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
VARSP26640 SYBU-219ENST00000528647 2995 ntAPPRIS P4 TSL 2 BASIC15.88■□□□□ 0.13
VARSP26640 CCDC130-204ENST00000586600 1922 ntAPPRIS P1 TSL 5 BASIC15.88■□□□□ 0.13
VARSP26640 ASAH1-223ENST00000636171 2283 ntTSL 5 BASIC15.88■□□□□ 0.13
VARSP26640 SCART1-206ENST00000640237 4351 ntAPPRIS P1 TSL 5 BASIC15.88■□□□□ 0.13
VARSP26640 DNM1-208ENST00000486160 3181 ntAPPRIS ALT1 TSL 1 (best) BASIC15.88■□□□□ 0.13
VARSP26640 AP002360.1-202ENST00000530460 2462 ntAPPRIS ALT2 BASIC15.88■□□□□ 0.13
VARSP26640 LINC01250-201ENST00000457478 2344 ntTSL 2 BASIC15.88■□□□□ 0.13
VARSP26640 PRLH-201ENST00000165524 264 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
VARSP26640 AL109613.1-202ENST00000427243 639 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
VARSP26640 SEC24B-AS1-201ENST00000499359 957 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
VARSP26640 SEC24B-AS1-204ENST00000510971 554 ntTSL 4 BASIC15.88■□□□□ 0.13
VARSP26640 IGLL5-201ENST00000526893 1050 ntAPPRIS P2 TSL 1 (best) BASIC15.88■□□□□ 0.13
VARSP26640 KRTAP5-9-201ENST00000528743 1136 ntAPPRIS P1 BASIC15.88■□□□□ 0.13
VARSP26640 IGLL5-202ENST00000531372 882 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
VARSP26640 LINC02387-201ENST00000541749 868 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
VARSP26640 AKR1B10P2-201ENST00000577332 927 ntBASIC15.88■□□□□ 0.13
VARSP26640 AC009630.3-201ENST00000581909 729 ntTSL 5 BASIC15.88■□□□□ 0.13
VARSP26640 BX547991.1-201ENST00000582543 1206 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
VARSP26640 METTL23-203ENST00000586738 1059 ntTSL 5 BASIC15.88■□□□□ 0.13
VARSP26640 METTL23-205ENST00000588302 925 ntTSL 5 BASIC15.88■□□□□ 0.13
VARSP26640 UBE3D-208ENST00000626828 114 ntTSL 5 BASIC15.88■□□□□ 0.13
VARSP26640 HPN-201ENST00000262626 2363 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
VARSP26640 ALDOA-226ENST00000569798 1499 ntTSL 2 BASIC15.88■□□□□ 0.13
VARSP26640 SHISA6-204ENST00000441885 7575 ntAPPRIS P3 TSL 5 BASIC15.88■□□□□ 0.13
VARSP26640 AC010491.1-201ENST00000563101 2797 ntBASIC15.88■□□□□ 0.13
VARSP26640 CFLAR-204ENST00000341582 2056 ntAPPRIS ALT2 TSL 1 (best) BASIC15.88■□□□□ 0.13
Retrieved 100 of 98,524 protein–RNA pairs in 42.7 ms