Protein–RNA interactions for Protein: P25067

COL8A2, Collagen alpha-2(VIII) chain, humanhuman

Predictions only

Length 703 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL8A2P25067 RN7SL618P-201ENST00000477850 296 ntBASIC13.59□□□□□ -0.23
COL8A2P25067 AC106772.1-201ENST00000506629 591 ntTSL 3 BASIC13.59□□□□□ -0.23
COL8A2P25067 AC084125.2-203ENST00000532766 821 ntTSL 3 BASIC13.59□□□□□ -0.23
COL8A2P25067 ZNF710-AS1-201ENST00000558334 1168 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
COL8A2P25067 AC044860.1-202ENST00000559481 777 ntBASIC13.59□□□□□ -0.23
COL8A2P25067 AC020978.5-201ENST00000564147 533 ntTSL 4 BASIC13.59□□□□□ -0.23
COL8A2P25067 AC040162.1-202ENST00000573493 573 ntAPPRIS P1 TSL 3 BASIC13.59□□□□□ -0.23
COL8A2P25067 SECTM1-202ENST00000580437 1030 ntAPPRIS ALT2 TSL 2 BASIC13.59□□□□□ -0.23
COL8A2P25067 AC012615.6-204ENST00000587741 477 ntTSL 3 BASIC13.59□□□□□ -0.23
COL8A2P25067 TPGS2-215ENST00000590842 1239 ntTSL 2 BASIC13.59□□□□□ -0.23
COL8A2P25067 ZNF324B-203ENST00000594214 564 ntTSL 2 BASIC13.59□□□□□ -0.23
COL8A2P25067 LINC00207-204ENST00000605505 666 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
COL8A2P25067 AC004233.3-201ENST00000607794 1269 ntBASIC13.59□□□□□ -0.23
COL8A2P25067 AL033527.5-202ENST00000641632 1098 ntBASIC13.59□□□□□ -0.23
COL8A2P25067 HM13-202ENST00000340852 1606 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
COL8A2P25067 ME2P1-201ENST00000426028 1970 ntBASIC13.59□□□□□ -0.23
COL8A2P25067 HDHD3-202ENST00000374180 1497 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
COL8A2P25067 TNRC18-202ENST00000399434 1459 ntTSL 2 BASIC13.59□□□□□ -0.23
COL8A2P25067 PPP1CB-202ENST00000358506 4771 ntAPPRIS P1 TSL 5 BASIC13.59□□□□□ -0.23
COL8A2P25067 FBXL12-206ENST00000588922 1843 ntTSL 2 BASIC13.59□□□□□ -0.23
COL8A2P25067 CYP21A2-221ENST00000418967 2182 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
COL8A2P25067 DIMT1-201ENST00000199320 2859 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
COL8A2P25067 SOX30-202ENST00000311371 2716 ntAPPRIS ALT2 TSL 1 (best) BASIC13.59□□□□□ -0.23
COL8A2P25067 NCAPH2-205ENST00000420993 2037 ntAPPRIS P3 TSL 1 (best) BASIC13.59□□□□□ -0.23
COL8A2P25067 DENND3-201ENST00000262585 5438 ntAPPRIS P2 TSL 5 BASIC13.59□□□□□ -0.23
COL8A2P25067 OSBPL1A-203ENST00000399441 1887 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
COL8A2P25067 NFATC4-231ENST00000557451 5613 ntAPPRIS ALT2 TSL 1 (best) BASIC13.59□□□□□ -0.23
COL8A2P25067 AC005622.1-202ENST00000637093 1543 ntTSL 5 BASIC13.59□□□□□ -0.23
COL8A2P25067 ARL14EP-201ENST00000282032 2430 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
COL8A2P25067 ITGAV-202ENST00000374907 6903 ntAPPRIS ALT2 TSL 1 (best) BASIC13.59□□□□□ -0.23
COL8A2P25067 BRSK1-202ENST00000326848 2095 ntTSL 5 BASIC13.59□□□□□ -0.23
COL8A2P25067 LHCGR-204ENST00000405626 2073 ntAPPRIS ALT2 TSL 5 BASIC13.59□□□□□ -0.23
COL8A2P25067 MITF-204ENST00000352241 4814 ntAPPRIS ALT1 TSL 1 (best) BASIC13.59□□□□□ -0.23
COL8A2P25067 FAM53A-201ENST00000308132 2802 ntAPPRIS P1 TSL 2 BASIC13.59□□□□□ -0.23
COL8A2P25067 ANKRD24-202ENST00000318934 3906 ntAPPRIS P2 TSL 5 BASIC13.58□□□□□ -0.23
COL8A2P25067 WAC-203ENST00000354911 3042 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.23
COL8A2P25067 NPBWR2-201ENST00000369768 1352 ntAPPRIS P1 BASIC13.58□□□□□ -0.23
COL8A2P25067 NSMF-205ENST00000371474 3571 ntAPPRIS ALT1 TSL 1 (best) BASIC13.58□□□□□ -0.23
COL8A2P25067 NSMF-208ENST00000437259 3577 ntAPPRIS ALT1 TSL 5 BASIC13.58□□□□□ -0.23
COL8A2P25067 UGT3A2-204ENST00000513300 1924 ntTSL 2 BASIC13.58□□□□□ -0.23
COL8A2P25067 AP001372.2-201ENST00000526036 2493 ntTSL 1 (best) BASIC13.58□□□□□ -0.23
COL8A2P25067 AL596257.1-201ENST00000641463 2694 ntBASIC13.58□□□□□ -0.23
COL8A2P25067 ABHD2-207ENST00000565973 2347 ntAPPRIS P1 TSL 5 BASIC13.58□□□□□ -0.23
COL8A2P25067 POC1B-202ENST00000393179 3096 ntTSL 1 (best) BASIC13.58□□□□□ -0.23
COL8A2P25067 MAP3K9-201ENST00000381250 4025 ntAPPRIS ALT2 TSL 5 BASIC13.58□□□□□ -0.24
COL8A2P25067 ELF2-204ENST00000394235 4012 ntAPPRIS P1 TSL 5 BASIC13.58□□□□□ -0.24
COL8A2P25067 TMEM5-205ENST00000537373 1966 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
COL8A2P25067 CYP46A1-201ENST00000261835 2181 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
COL8A2P25067 WDR45B-201ENST00000392325 2587 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
COL8A2P25067 CRTC2-202ENST00000368630 1635 ntTSL 2 BASIC13.58□□□□□ -0.24
COL8A2P25067 MYCBPAP-201ENST00000323776 3186 ntAPPRIS P2 TSL 1 (best) BASIC13.58□□□□□ -0.24
COL8A2P25067 MELTF-201ENST00000296350 3963 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
COL8A2P25067 LINC00094-205ENST00000603928 5722 ntAPPRIS ALT2 TSL 2 BASIC13.58□□□□□ -0.24
COL8A2P25067 GPER1-202ENST00000397088 2639 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
COL8A2P25067 NPM2-201ENST00000289820 1100 ntAPPRIS P2 TSL 1 (best) BASIC13.58□□□□□ -0.24
COL8A2P25067 ACRV1-201ENST00000315608 1042 ntAPPRIS ALT2 TSL 1 (best) BASIC13.58□□□□□ -0.24
COL8A2P25067 SYCE1-202ENST00000343131 1113 ntAPPRIS ALT2 TSL 1 (best) BASIC13.58□□□□□ -0.24
COL8A2P25067 HDAC8-203ENST00000373559 632 ntTSL 2 BASIC13.58□□□□□ -0.24
COL8A2P25067 HDAC8-208ENST00000373583 434 ntTSL 5 BASIC13.58□□□□□ -0.24
COL8A2P25067 ZNF593-202ENST00000374266 675 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
COL8A2P25067 NPM2-202ENST00000381530 925 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
COL8A2P25067 FAM159B-201ENST00000389074 847 ntAPPRIS P1 TSL 2 BASIC13.58□□□□□ -0.24
COL8A2P25067 PNKD-204ENST00000436005 978 ntTSL 5 BASIC13.58□□□□□ -0.24
COL8A2P25067 AC139713.2-206ENST00000499587 566 ntTSL 4 BASIC13.58□□□□□ -0.24
COL8A2P25067 BRK1-201ENST00000530758 1233 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
COL8A2P25067 AC135586.1-201ENST00000539323 574 ntBASIC13.58□□□□□ -0.24
COL8A2P25067 AC010336.2-201ENST00000564226 506 ntBASIC13.58□□□□□ -0.24
COL8A2P25067 COX11-202ENST00000571584 1108 ntTSL 2 BASIC13.58□□□□□ -0.24
COL8A2P25067 IFT20-209ENST00000579419 787 ntAPPRIS ALT1 TSL 3 BASIC13.58□□□□□ -0.24
COL8A2P25067 AURKB-214ENST00000585124 1227 ntAPPRIS P3 TSL 1 (best) BASIC13.58□□□□□ -0.24
COL8A2P25067 AC005523.1-201ENST00000598782 418 ntTSL 5 BASIC13.58□□□□□ -0.24
COL8A2P25067 AC105277.1-203ENST00000635492 1293 ntTSL 5 BASIC13.58□□□□□ -0.24
COL8A2P25067 AFTPH-202ENST00000238856 4040 ntAPPRIS P3 TSL 1 (best) BASIC13.58□□□□□ -0.24
COL8A2P25067 LAT-202ENST00000360872 1459 ntAPPRIS P3 TSL 2 BASIC13.58□□□□□ -0.24
COL8A2P25067 C2orf48-201ENST00000381786 1897 ntTSL 2 BASIC13.58□□□□□ -0.24
COL8A2P25067 PLPPR5-201ENST00000263177 3288 ntAPPRIS P4 TSL 1 (best) BASIC13.58□□□□□ -0.24
COL8A2P25067 DCAF11-217ENST00000559115 2711 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
COL8A2P25067 SBSN-201ENST00000452271 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC13.58□□□□□ -0.24
COL8A2P25067 GPER1-206ENST00000617001 1900 ntTSL 5 BASIC13.58□□□□□ -0.24
COL8A2P25067 DDTL-201ENST00000215770 1545 ntAPPRIS P1 TSL 2 BASIC13.58□□□□□ -0.24
COL8A2P25067 AKR7L-202ENST00000429712 1313 ntAPPRIS P5 TSL 1 (best) BASIC13.58□□□□□ -0.24
COL8A2P25067 FGFR3-208ENST00000481110 4217 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
COL8A2P25067 C17orf100-201ENST00000542475 1756 ntAPPRIS P1 BASIC13.58□□□□□ -0.24
COL8A2P25067 AP000487.1-202ENST00000500185 2602 ntTSL 2 BASIC13.58□□□□□ -0.24
COL8A2P25067 MYO3A-206ENST00000543632 2203 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
COL8A2P25067 SMIM25-203ENST00000425497 2010 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
COL8A2P25067 PRRT4-201ENST00000446477 3544 ntAPPRIS P1 TSL 5 BASIC13.57□□□□□ -0.24
COL8A2P25067 GTF2H2C-201ENST00000380729 1803 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
COL8A2P25067 RECK-201ENST00000377966 4888 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
COL8A2P25067 SEPT8-204ENST00000378699 2289 ntTSL 5 BASIC13.57□□□□□ -0.24
COL8A2P25067 AC006449.5-201ENST00000610658 2098 ntBASIC13.57□□□□□ -0.24
COL8A2P25067 REPS1-201ENST00000258062 3161 ntAPPRIS P3 TSL 1 (best) BASIC13.57□□□□□ -0.24
COL8A2P25067 NUP50-202ENST00000396096 1895 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
COL8A2P25067 CDCA5-201ENST00000275517 2587 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
COL8A2P25067 LINC01215-201ENST00000607746 2592 ntTSL 3 BASIC13.57□□□□□ -0.24
COL8A2P25067 NFATC4-210ENST00000554050 3057 ntAPPRIS ALT2 TSL 1 (best) BASIC13.57□□□□□ -0.24
COL8A2P25067 HRCT1-201ENST00000354323 950 ntAPPRIS P1 BASIC13.57□□□□□ -0.24
COL8A2P25067 ASB12-201ENST00000362002 1289 ntAPPRIS P1 TSL 2 BASIC13.57□□□□□ -0.24
COL8A2P25067 FCRLB-204ENST00000367946 1152 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
COL8A2P25067 TCEAL3-202ENST00000372627 1113 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Retrieved 100 of 98,524 protein–RNA pairs in 28.8 ms