Protein–RNA interactions for Protein: P21709

EPHA1, Ephrin type-A receptor 1, humanhuman

Predictions only

Length 976 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EPHA1P21709 SEPT6-209ENST00000489216 1617 ntAPPRIS ALT1 TSL 1 (best) BASIC13.89□□□□□ -0.19
EPHA1P21709 SNX19-207ENST00000528555 1506 ntTSL 2 BASIC13.89□□□□□ -0.19
EPHA1P21709 PLEKHA4-202ENST00000355496 2614 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
EPHA1P21709 VWA2-203ENST00000603594 2600 ntTSL 2 BASIC13.89□□□□□ -0.19
EPHA1P21709 AC097376.2-201ENST00000608661 2510 ntTSL 5 BASIC13.89□□□□□ -0.19
EPHA1P21709 ZNF408-201ENST00000311764 2442 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
EPHA1P21709 ADM-201ENST00000278175 1885 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
EPHA1P21709 PUDP-203ENST00000424830 1334 ntTSL 3 BASIC13.89□□□□□ -0.19
EPHA1P21709 SYT13-201ENST00000020926 5144 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
EPHA1P21709 PPAN-P2RY11-202ENST00000428358 2661 ntTSL 2 BASIC13.88□□□□□ -0.19
EPHA1P21709 KRT35-202ENST00000393989 1670 ntAPPRIS P1 TSL 5 BASIC13.88□□□□□ -0.19
EPHA1P21709 WDR90-209ENST00000547944 1672 ntTSL 2 BASIC13.88□□□□□ -0.19
EPHA1P21709 SERINC2-202ENST00000373710 2146 ntTSL 2 BASIC13.88□□□□□ -0.19
EPHA1P21709 LSP1-202ENST00000381775 2016 ntAPPRIS ALT2 TSL 2 BASIC13.88□□□□□ -0.19
EPHA1P21709 CHMP1A-201ENST00000397901 2483 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
EPHA1P21709 TRMT2A-202ENST00000403707 2928 ntAPPRIS P3 TSL 1 (best) BASIC13.88□□□□□ -0.19
EPHA1P21709 LINC02370-201ENST00000428272 2009 ntTSL 5 BASIC13.88□□□□□ -0.19
EPHA1P21709 PIGT-207ENST00000543458 2037 ntTSL 2 BASIC13.88□□□□□ -0.19
EPHA1P21709 ZFR2-201ENST00000262961 4756 ntAPPRIS P1 TSL 5 BASIC13.88□□□□□ -0.19
EPHA1P21709 DACT3-203ENST00000410105 3085 ntTSL 2 BASIC13.88□□□□□ -0.19
EPHA1P21709 MYH6-202ENST00000405093 5941 ntAPPRIS P1 TSL 5 BASIC13.88□□□□□ -0.19
EPHA1P21709 ZFAND6-201ENST00000261749 1814 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
EPHA1P21709 PI16-201ENST00000373674 2190 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
EPHA1P21709 TLN1-201ENST00000314888 8823 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
EPHA1P21709 AL669831.1-201ENST00000506640 6432 ntTSL 5 BASIC13.88□□□□□ -0.19
EPHA1P21709 COG3-201ENST00000349995 4498 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
EPHA1P21709 SLC46A2-201ENST00000374228 2502 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
EPHA1P21709 EML4-201ENST00000318522 5549 ntAPPRIS P3 TSL 1 (best) BASIC13.88□□□□□ -0.19
EPHA1P21709 AL354813.1-201ENST00000526566 2437 ntTSL 5 BASIC13.88□□□□□ -0.19
EPHA1P21709 C12orf66-204ENST00000544871 2441 ntTSL 2 BASIC13.88□□□□□ -0.19
EPHA1P21709 MBP-202ENST00000355994 2772 ntTSL 5 BASIC13.88□□□□□ -0.19
EPHA1P21709 STX10-201ENST00000242770 1099 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
EPHA1P21709 NKX2-6-201ENST00000325017 906 ntAPPRIS P1 TSL 2 BASIC13.88□□□□□ -0.19
EPHA1P21709 CD99L2-202ENST00000355149 1278 ntAPPRIS ALT2 TSL 1 (best) BASIC13.88□□□□□ -0.19
EPHA1P21709 WLS-203ENST00000370971 700 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
EPHA1P21709 CD99-202ENST00000381180 530 ntTSL 2 BASIC13.88□□□□□ -0.19
EPHA1P21709 CLTA-203ENST00000396603 1090 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
EPHA1P21709 PAWRP1-201ENST00000451083 565 ntBASIC13.88□□□□□ -0.19
EPHA1P21709 HLA-J-203ENST00000494367 1087 ntBASIC13.88□□□□□ -0.19
EPHA1P21709 GATB-205ENST00000508611 605 ntTSL 2 BASIC13.88□□□□□ -0.19
EPHA1P21709 AP000777.2-201ENST00000539897 501 ntTSL 4 BASIC13.88□□□□□ -0.19
EPHA1P21709 ARHGEF25-202ENST00000333972 2246 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
EPHA1P21709 OSBPL9-222ENST00000531828 2210 ntTSL 5 BASIC13.88□□□□□ -0.19
EPHA1P21709 PCDHA3-202ENST00000532566 4594 ntBASIC13.88□□□□□ -0.19
EPHA1P21709 CDIPT-209ENST00000569956 1532 ntAPPRIS P1 TSL 5 BASIC13.88□□□□□ -0.19
EPHA1P21709 CSAD-208ENST00000444623 2122 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
EPHA1P21709 TMEM200C-202ENST00000581347 10638 ntAPPRIS P1 TSL 5 BASIC13.88□□□□□ -0.19
EPHA1P21709 PLEKHG3-202ENST00000394691 4397 ntTSL 5 BASIC13.88□□□□□ -0.19
EPHA1P21709 SKOR1-201ENST00000341418 3332 ntAPPRIS P2 TSL 1 (best) BASIC13.88□□□□□ -0.19
EPHA1P21709 CUL7-203ENST00000535468 5504 ntAPPRIS ALT2 TSL 2 BASIC13.88□□□□□ -0.19
EPHA1P21709 AC129492.6-201ENST00000611383 1305 ntBASIC13.88□□□□□ -0.19
EPHA1P21709 TMEM263-201ENST00000280756 3362 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
EPHA1P21709 TSPAN5-201ENST00000305798 3365 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
EPHA1P21709 SMG1P3-206ENST00000522841 2774 ntTSL 2 BASIC13.88□□□□□ -0.19
EPHA1P21709 PDE1C-202ENST00000396182 2420 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
EPHA1P21709 RLF-201ENST00000372771 6246 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
EPHA1P21709 LHCGR-204ENST00000405626 2073 ntAPPRIS ALT2 TSL 5 BASIC13.87□□□□□ -0.19
EPHA1P21709 EDC3-202ENST00000426797 2093 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
EPHA1P21709 INPP5D-201ENST00000359570 5274 ntAPPRIS ALT2 TSL 1 (best) BASIC13.87□□□□□ -0.19
EPHA1P21709 UGT8-201ENST00000310836 4084 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
EPHA1P21709 MAP7-207ENST00000616617 4326 ntAPPRIS ALT2 TSL 5 BASIC13.87□□□□□ -0.19
EPHA1P21709 IFT140-201ENST00000361339 2987 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
EPHA1P21709 BIRC7-201ENST00000217169 1368 ntAPPRIS P4 TSL 1 (best) BASIC13.87□□□□□ -0.19
EPHA1P21709 USHBP1-203ENST00000431146 2136 ntTSL 2 BASIC13.87□□□□□ -0.19
EPHA1P21709 URAHP-203ENST00000517889 1381 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
EPHA1P21709 AL021920.2-201ENST00000624828 1351 ntBASIC13.87□□□□□ -0.19
EPHA1P21709 PDP1-201ENST00000297598 4272 ntAPPRIS P3 TSL 1 (best) BASIC13.87□□□□□ -0.19
EPHA1P21709 APOPT1-201ENST00000409074 2523 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
EPHA1P21709 AL139300.1-201ENST00000472726 2505 ntAPPRIS P1 TSL 2 BASIC13.87□□□□□ -0.19
EPHA1P21709 LHFPL2-207ENST00000515007 4680 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
EPHA1P21709 KIAA1468-201ENST00000256858 5579 ntAPPRIS P1 TSL 5 BASIC13.87□□□□□ -0.19
EPHA1P21709 GFAP-233ENST00000639277 1783 ntTSL 5 BASIC13.87□□□□□ -0.19
EPHA1P21709 ESR2-201ENST00000267525 1518 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
EPHA1P21709 PSMG3-201ENST00000252329 1007 ntAPPRIS P1 TSL 3 BASIC13.87□□□□□ -0.19
EPHA1P21709 LST1-202ENST00000303757 604 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
EPHA1P21709 POLR3GL-202ENST00000369314 1165 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
EPHA1P21709 CAMKMT-204ENST00000407131 652 ntTSL 3 BASIC13.87□□□□□ -0.19
EPHA1P21709 FALEC-201ENST00000416894 566 ntTSL 3 BASIC13.87□□□□□ -0.19
EPHA1P21709 ARHGAP11B-201ENST00000428041 1017 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
EPHA1P21709 AL121832.1-203ENST00000433121 475 ntTSL 3 BASIC13.87□□□□□ -0.19
EPHA1P21709 ITGA9-AS1-209ENST00000450990 562 ntTSL 4 BASIC13.87□□□□□ -0.19
EPHA1P21709 AC018730.1-201ENST00000454183 327 ntTSL 3 BASIC13.87□□□□□ -0.19
EPHA1P21709 AC087163.2-201ENST00000457299 853 ntBASIC13.87□□□□□ -0.19
EPHA1P21709 SPINK2-203ENST00000506738 763 ntAPPRIS ALT2 TSL 2 BASIC13.87□□□□□ -0.19
EPHA1P21709 AF131215.3-201ENST00000532453 639 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
EPHA1P21709 WDR25-203ENST00000542471 1214 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
EPHA1P21709 UBE2Q2L-201ENST00000558195 498 ntAPPRIS P1 TSL 2 BASIC13.87□□□□□ -0.19
EPHA1P21709 MARVELD3-206ENST00000567566 850 ntAPPRIS ALT2 TSL 1 (best) BASIC13.87□□□□□ -0.19
EPHA1P21709 IGHV3OR16-6-201ENST00000568775 360 ntBASIC13.87□□□□□ -0.19
EPHA1P21709 RAB9A-203ENST00000618931 737 ntAPPRIS P1 TSL 2 BASIC13.87□□□□□ -0.19
EPHA1P21709 LINC00628-201ENST00000628516 1289 ntBASIC13.87□□□□□ -0.19
EPHA1P21709 AC110491.3-201ENST00000631985 460 ntTSL 2 BASIC13.87□□□□□ -0.19
EPHA1P21709 AC010507.1-202ENST00000633286 381 ntTSL 3 BASIC13.87□□□□□ -0.19
EPHA1P21709 KRT2-201ENST00000309680 2403 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
EPHA1P21709 KCNJ12-201ENST00000331718 2198 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
EPHA1P21709 TPD52L2-209ENST00000611972 2197 ntTSL 3 BASIC13.87□□□□□ -0.19
EPHA1P21709 AC023824.1-201ENST00000562945 2975 ntBASIC13.87□□□□□ -0.19
EPHA1P21709 EVPLL-201ENST00000399134 2095 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
EPHA1P21709 HS6ST2-203ENST00000406696 1818 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
EPHA1P21709 PLPPR5-201ENST00000263177 3288 ntAPPRIS P4 TSL 1 (best) BASIC13.87□□□□□ -0.19
Retrieved 100 of 98,524 protein–RNA pairs in 32.3 ms