Protein–RNA interactions for Protein: P20338

RAB4A, Ras-related protein Rab-4A, humanhuman

Predictions only

Length 218 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB4AP20338 EGLN1P1-201ENST00000531623 762 ntBASIC12.41□□□□□ -0.42
RAB4AP20338 PPOX-214ENST00000535223 664 ntTSL 3 BASIC12.41□□□□□ -0.42
RAB4AP20338 REXO2-216ENST00000544196 452 ntTSL 3 BASIC12.41□□□□□ -0.42
RAB4AP20338 RNASEK-203ENST00000549393 783 ntTSL 3 BASIC12.41□□□□□ -0.42
RAB4AP20338 ANKRD34C-AS1-201ENST00000557790 594 ntTSL 3 BASIC12.41□□□□□ -0.42
RAB4AP20338 DUS2-207ENST00000565263 2310 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
RAB4AP20338 CMTM3-210ENST00000565666 769 ntTSL 3 BASIC12.41□□□□□ -0.42
RAB4AP20338 AL929554.1-201ENST00000568665 460 ntAPPRIS P1 TSL 3 BASIC12.41□□□□□ -0.42
RAB4AP20338 AC087645.2-201ENST00000586321 799 ntTSL 3 BASIC12.41□□□□□ -0.42
RAB4AP20338 MIMT1-202ENST00000599641 1290 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
RAB4AP20338 SMAGP-204ENST00000603838 816 ntTSL 2 BASIC12.41□□□□□ -0.42
RAB4AP20338 AP000525.1-201ENST00000608286 694 ntBASIC12.41□□□□□ -0.42
RAB4AP20338 MROH2A-208ENST00000610772 5324 ntAPPRIS P2 TSL 5 BASIC12.41□□□□□ -0.42
RAB4AP20338 C5orf56-206ENST00000612967 2791 ntAPPRIS ALT2 TSL 1 (best) BASIC12.41□□□□□ -0.42
RAB4AP20338 CADM1-222ENST00000616271 1246 ntTSL 5 BASIC12.41□□□□□ -0.42
RAB4AP20338 DGUOK-208ENST00000629438 1029 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
RAB4AP20338 RPS27A-211ENST00000639844 606 ntTSL 5 BASIC12.41□□□□□ -0.42
RAB4AP20338 ANKRD20A8P-203ENST00000641373 517 ntBASIC12.41□□□□□ -0.42
RAB4AP20338 FGR-203ENST00000374005 2729 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
RAB4AP20338 RTN4-202ENST00000337526 4790 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
RAB4AP20338 AIFM1-201ENST00000287295 2260 ntAPPRIS P4 TSL 1 (best) BASIC12.41□□□□□ -0.42
RAB4AP20338 LINC00839-202ENST00000429940 2253 ntTSL 2 BASIC12.41□□□□□ -0.42
RAB4AP20338 MTCL1-202ENST00000359865 6093 ntAPPRIS P2 TSL 2 BASIC12.41□□□□□ -0.42
RAB4AP20338 JADE1-209ENST00000511647 3560 ntAPPRIS ALT2 TSL 1 (best) BASIC12.41□□□□□ -0.42
RAB4AP20338 ASB7-202ENST00000343276 1694 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
RAB4AP20338 FAM9A-202ENST00000543214 1544 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
RAB4AP20338 WNT5A-202ENST00000474267 6042 ntAPPRIS P1 TSL 5 BASIC12.41□□□□□ -0.42
RAB4AP20338 CCDC83-201ENST00000280245 2358 ntAPPRIS P3 TSL 2 BASIC12.41□□□□□ -0.42
RAB4AP20338 CILP2-202ENST00000586018 4234 ntAPPRIS ALT1 TSL 2 BASIC12.41□□□□□ -0.42
RAB4AP20338 NR3C2-209ENST00000625323 5909 ntTSL 5 BASIC12.41□□□□□ -0.42
RAB4AP20338 AC099521.3-201ENST00000624251 2938 ntBASIC12.41□□□□□ -0.42
RAB4AP20338 HS6ST2-201ENST00000370833 1938 ntTSL 5 BASIC12.41□□□□□ -0.42
RAB4AP20338 BAG1-210ENST00000634734 3786 ntAPPRIS ALT2 TSL 1 (best) BASIC12.41□□□□□ -0.42
RAB4AP20338 WASHC2C-210ENST00000623400 4616 ntAPPRIS ALT2 TSL 1 (best) BASIC12.41□□□□□ -0.42
RAB4AP20338 FBLN2-203ENST00000404922 4318 ntAPPRIS P4 TSL 5 BASIC12.41□□□□□ -0.42
RAB4AP20338 FZR1-202ENST00000395095 1491 ntAPPRIS ALT1 TSL 1 (best) BASIC12.4□□□□□ -0.42
RAB4AP20338 TRIM13-206ENST00000457662 1489 ntAPPRIS P3 TSL 1 (best) BASIC12.4□□□□□ -0.42
RAB4AP20338 MPP3-201ENST00000398389 2182 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
RAB4AP20338 NELFA-203ENST00000411638 2199 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
RAB4AP20338 SCYL1-205ENST00000524944 2715 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
RAB4AP20338 SMIM24-201ENST00000215531 1329 ntAPPRIS P2 TSL 1 (best) BASIC12.4□□□□□ -0.42
RAB4AP20338 MED15-202ENST00000292733 3252 ntAPPRIS P3 TSL 1 (best) BASIC12.4□□□□□ -0.42
RAB4AP20338 SYN1-201ENST00000295987 3299 ntAPPRIS P3 TSL 2 BASIC12.4□□□□□ -0.42
RAB4AP20338 ARPC1B-211ENST00000451682 1715 ntAPPRIS P1 TSL 5 BASIC12.4□□□□□ -0.42
RAB4AP20338 SAFB-205ENST00000588852 2842 ntAPPRIS ALT2 TSL 1 (best) BASIC12.4□□□□□ -0.42
RAB4AP20338 ZNF777-201ENST00000247930 3233 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
RAB4AP20338 SESN1-202ENST00000356644 2676 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
RAB4AP20338 PHYHD1-201ENST00000308941 1599 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
RAB4AP20338 HSD11B1L-223ENST00000616276 1580 ntAPPRIS ALT2 TSL 5 BASIC12.4□□□□□ -0.42
RAB4AP20338 EIF3A-201ENST00000369144 6646 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
RAB4AP20338 LGALS3BP-218ENST00000591778 1961 ntTSL 2 BASIC12.4□□□□□ -0.42
RAB4AP20338 PRKD2-216ENST00000601806 2906 ntAPPRIS ALT2 TSL 5 BASIC12.4□□□□□ -0.42
RAB4AP20338 HYAL3-205ENST00000450982 1402 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
RAB4AP20338 ABHD14B-201ENST00000315877 2236 ntTSL 5 BASIC12.4□□□□□ -0.42
RAB4AP20338 DGCR6L-201ENST00000248879 1154 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
RAB4AP20338 NTAN1-201ENST00000287706 1204 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
RAB4AP20338 FAM212A-201ENST00000333323 1040 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
RAB4AP20338 NUDT8-202ENST00000376693 728 ntAPPRIS ALT2 TSL 2 BASIC12.4□□□□□ -0.42
RAB4AP20338 MPV17L-202ENST00000396385 1037 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
RAB4AP20338 FAHD2CP-202ENST00000443258 893 ntTSL 3 BASIC12.4□□□□□ -0.42
RAB4AP20338 RBM14-RBM4-203ENST00000500635 829 ntTSL 2 BASIC12.4□□□□□ -0.42
RAB4AP20338 AC034232.1-201ENST00000506026 1064 ntBASIC12.4□□□□□ -0.42
RAB4AP20338 LINC00599-204ENST00000521242 716 ntTSL 3 BASIC12.4□□□□□ -0.42
RAB4AP20338 PDCD5-207ENST00000590247 699 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
RAB4AP20338 PSMC3IP-208ENST00000590760 664 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
RAB4AP20338 CD24-206ENST00000620405 586 ntAPPRIS ALT2 TSL 2 BASIC12.4□□□□□ -0.42
RAB4AP20338 FP565260.3-205ENST00000620481 816 ntTSL 5 BASIC12.4□□□□□ -0.42
RAB4AP20338 ILKAP-212ENST00000622223 1088 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
RAB4AP20338 RNF187-203ENST00000639044 708 ntAPPRIS P2 TSL 1 (best) BASIC12.4□□□□□ -0.42
RAB4AP20338 ARHGAP27-203ENST00000428638 4242 ntAPPRIS P2 TSL 5 BASIC12.4□□□□□ -0.42
RAB4AP20338 EVPLL-201ENST00000399134 2095 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
RAB4AP20338 C19orf57-204ENST00000586783 2454 ntAPPRIS ALT2 TSL 5 BASIC12.4□□□□□ -0.42
RAB4AP20338 DBN1-203ENST00000393565 2701 ntAPPRIS ALT2 TSL 5 BASIC12.4□□□□□ -0.42
RAB4AP20338 CELF1-201ENST00000310513 4583 ntAPPRIS ALT1 TSL 1 (best) BASIC12.4□□□□□ -0.42
RAB4AP20338 ROBO3-221ENST00000543966 1520 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
RAB4AP20338 AC090114.2-201ENST00000608477 7054 ntBASIC12.4□□□□□ -0.42
RAB4AP20338 MBP-205ENST00000397860 4844 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
RAB4AP20338 CIC-204ENST00000572681 8218 ntTSL 5 BASIC12.4□□□□□ -0.42
RAB4AP20338 TTC29-201ENST00000325106 1785 ntAPPRIS P3 TSL 1 (best) BASIC12.4□□□□□ -0.42
RAB4AP20338 ETV4-205ENST00000545954 1775 ntTSL 2 BASIC12.4□□□□□ -0.42
RAB4AP20338 IMPDH1-204ENST00000419067 2431 ntTSL 3 BASIC12.4□□□□□ -0.42
RAB4AP20338 PABPC1-208ENST00000519004 2401 ntTSL 2 BASIC12.4□□□□□ -0.42
RAB4AP20338 C12orf66-204ENST00000544871 2441 ntTSL 2 BASIC12.4□□□□□ -0.42
RAB4AP20338 EDEM1-204ENST00000445686 1363 ntTSL 2 BASIC12.4□□□□□ -0.42
RAB4AP20338 THAP3-201ENST00000054650 1366 ntAPPRIS ALT2 TSL 1 (best) BASIC12.4□□□□□ -0.42
RAB4AP20338 CAPN7-201ENST00000253693 4353 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
RAB4AP20338 COG6-202ENST00000416691 5257 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
RAB4AP20338 SELPLG-203ENST00000550948 2256 ntAPPRIS P3 TSL 1 (best) BASIC12.4□□□□□ -0.42
RAB4AP20338 SATB2-211ENST00000614512 4972 ntTSL 5 BASIC12.4□□□□□ -0.42
RAB4AP20338 SLC3A2-208ENST00000536981 1486 ntTSL 2 BASIC12.4□□□□□ -0.43
RAB4AP20338 EPHB1-201ENST00000398015 4672 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.43
RAB4AP20338 ZBED1-203ENST00000381223 4510 ntAPPRIS P1 TSL 2 BASIC12.4□□□□□ -0.43
RAB4AP20338 FP565260.3-204ENST00000623795 2238 ntTSL 2 BASIC12.39□□□□□ -0.43
RAB4AP20338 MEIOC-201ENST00000409122 4604 ntAPPRIS P2 TSL 5 BASIC12.39□□□□□ -0.43
RAB4AP20338 FAM192A-201ENST00000309137 2848 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
RAB4AP20338 KCNN2-206ENST00000512097 3076 ntAPPRIS P2 TSL 5 BASIC12.39□□□□□ -0.43
RAB4AP20338 SMTN-203ENST00000358743 3198 ntAPPRIS P4 TSL 2 BASIC12.39□□□□□ -0.43
RAB4AP20338 ANKZF1-202ENST00000409849 2155 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
RAB4AP20338 CNN3-207ENST00000545882 1902 ntTSL 2 BASIC12.39□□□□□ -0.43
RAB4AP20338 LDB3-208ENST00000623007 1664 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
Retrieved 100 of 98,524 protein–RNA pairs in 41 ms