Protein–RNA interactions for Protein: P18846

ATF1, Cyclic AMP-dependent transcription factor ATF-1, humanhuman

Predictions only

Length 271 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATF1P18846 PLPP3-201ENST00000371250 3292 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
ATF1P18846 NEBL-203ENST00000417816 3008 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
ATF1P18846 CHCHD1-201ENST00000372833 835 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
ATF1P18846 C1QC-202ENST00000374639 1183 ntAPPRIS P1 TSL 2 BASIC14.17□□□□□ -0.14
ATF1P18846 CD99-202ENST00000381180 530 ntTSL 2 BASIC14.17□□□□□ -0.14
ATF1P18846 ATP6V0CP3-201ENST00000417255 467 ntBASIC14.17□□□□□ -0.14
ATF1P18846 IGF2-206ENST00000418738 934 ntAPPRIS P2 TSL 1 (best) BASIC14.17□□□□□ -0.14
ATF1P18846 KRT18P67-201ENST00000432816 1264 ntBASIC14.17□□□□□ -0.14
ATF1P18846 AL162431.1-201ENST00000434447 543 ntTSL 3 BASIC14.17□□□□□ -0.14
ATF1P18846 AP000688.1-201ENST00000535199 1221 ntTSL 2 BASIC14.17□□□□□ -0.14
ATF1P18846 AL160237.2-201ENST00000556165 472 ntBASIC14.17□□□□□ -0.14
ATF1P18846 AL512357.1-201ENST00000557687 518 ntTSL 4 BASIC14.17□□□□□ -0.14
ATF1P18846 ZFPM1-203ENST00000562437 502 ntTSL 2 BASIC14.17□□□□□ -0.14
ATF1P18846 AC021097.1-201ENST00000607902 574 ntBASIC14.17□□□□□ -0.14
ATF1P18846 ACTL9-202ENST00000612068 1252 ntBASIC14.17□□□□□ -0.14
ATF1P18846 IL1RN-202ENST00000354115 1747 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
ATF1P18846 APH1A-203ENST00000369109 1713 ntAPPRIS P4 TSL 1 (best) BASIC14.17□□□□□ -0.14
ATF1P18846 FAM160A2-203ENST00000524416 3327 ntTSL 2 BASIC14.17□□□□□ -0.14
ATF1P18846 YDJC-201ENST00000292778 1351 ntAPPRIS P1 TSL 2 BASIC14.17□□□□□ -0.14
ATF1P18846 ZNF517-202ENST00000525105 1383 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
ATF1P18846 SPRY1-207ENST00000610581 2608 ntAPPRIS P1 TSL 3 BASIC14.17□□□□□ -0.14
ATF1P18846 DUSP22-202ENST00000419235 3098 ntAPPRIS P1 TSL 2 BASIC14.17□□□□□ -0.14
ATF1P18846 NTNG1-202ENST00000370065 1485 ntTSL 5 BASIC14.17□□□□□ -0.14
ATF1P18846 CYB561-203ENST00000392976 3151 ntAPPRIS P1 TSL 3 BASIC14.17□□□□□ -0.14
ATF1P18846 TMEM132D-AS2-201ENST00000542578 1568 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
ATF1P18846 ZNF385A-205ENST00000546970 2494 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
ATF1P18846 RCSD1-206ENST00000537350 3044 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
ATF1P18846 P2RX5-TAX1BP3-201ENST00000550383 5905 ntAPPRIS P1 TSL 2 BASIC14.17□□□□□ -0.14
ATF1P18846 KLK3-202ENST00000360617 1664 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
ATF1P18846 HCK-209ENST00000538448 2215 ntAPPRIS ALT2 TSL 2 BASIC14.17□□□□□ -0.14
ATF1P18846 AP1M2-207ENST00000590923 1757 ntAPPRIS ALT1 TSL 1 (best) BASIC14.17□□□□□ -0.14
ATF1P18846 KRT77-201ENST00000341809 3305 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
ATF1P18846 FOXJ2-201ENST00000162391 5523 ntAPPRIS P2 TSL 1 (best) BASIC14.16□□□□□ -0.14
ATF1P18846 ACSL1-202ENST00000454703 3636 ntTSL 5 BASIC14.16□□□□□ -0.14
ATF1P18846 GABRG3-206ENST00000555083 1405 ntTSL 2 BASIC14.16□□□□□ -0.14
ATF1P18846 AC026748.1-201ENST00000624349 3251 ntBASIC14.16□□□□□ -0.14
ATF1P18846 FAM208A-201ENST00000355628 5239 ntAPPRIS ALT2 TSL 1 (best) BASIC14.16□□□□□ -0.14
ATF1P18846 TINF2-202ENST00000399423 2168 ntAPPRIS ALT2 TSL 1 (best) BASIC14.16□□□□□ -0.14
ATF1P18846 EVPL-201ENST00000301607 6614 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
ATF1P18846 AC112484.1-201ENST00000508239 2291 ntAPPRIS P5 TSL 2 BASIC14.16□□□□□ -0.14
ATF1P18846 ATP6AP2-225ENST00000637482 1648 ntAPPRIS ALT2 TSL 5 BASIC14.16□□□□□ -0.14
ATF1P18846 ALOX15B-204ENST00000572022 2396 ntTSL 2 BASIC14.16□□□□□ -0.14
ATF1P18846 IPPK-201ENST00000287996 4401 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
ATF1P18846 CRLS1-203ENST00000452938 3859 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
ATF1P18846 YTHDC1-202ENST00000355665 3244 ntAPPRIS P3 TSL 1 (best) BASIC14.16□□□□□ -0.14
ATF1P18846 CYB561A3-203ENST00000447532 1803 ntTSL 5 BASIC14.16□□□□□ -0.14
ATF1P18846 GLIDR-202ENST00000625350 2588 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
ATF1P18846 RBM47-202ENST00000381793 4816 ntAPPRIS ALT1 TSL 2 BASIC14.16□□□□□ -0.14
ATF1P18846 HIST2H2AB-201ENST00000331128 393 ntAPPRIS P1 BASIC14.16□□□□□ -0.14
ATF1P18846 RWDD3-202ENST00000370202 1235 ntAPPRIS P1 TSL 3 BASIC14.16□□□□□ -0.14
ATF1P18846 MED22-202ENST00000371999 987 ntTSL 3 BASIC14.16□□□□□ -0.14
ATF1P18846 GBGT1-201ENST00000372036 871 ntTSL 3 BASIC14.16□□□□□ -0.14
ATF1P18846 KRTCAP3-202ENST00000407293 942 ntTSL 2 BASIC14.16□□□□□ -0.14
ATF1P18846 CHCHD3-203ENST00000448878 1038 ntTSL 5 BASIC14.16□□□□□ -0.14
ATF1P18846 PMF1-BGLAP-203ENST00000490491 1007 ntAPPRIS P1 TSL 2 BASIC14.16□□□□□ -0.14
ATF1P18846 GOLGA7-203ENST00000518270 808 ntAPPRIS P1 TSL 5 BASIC14.16□□□□□ -0.14
ATF1P18846 FCHSD1-204ENST00000519800 802 ntTSL 2 BASIC14.16□□□□□ -0.14
ATF1P18846 PTHLH-207ENST00000539239 890 ntAPPRIS ALT1 TSL 5 BASIC14.16□□□□□ -0.14
ATF1P18846 SPINT1-AS1-203ENST00000565315 629 ntTSL 2 BASIC14.16□□□□□ -0.14
ATF1P18846 NAA60-217ENST00000572942 1089 ntTSL 2 BASIC14.16□□□□□ -0.14
ATF1P18846 OAZ1-202ENST00000582888 969 ntAPPRIS ALT1 TSL 5 BASIC14.16□□□□□ -0.14
ATF1P18846 URAHP-203ENST00000517889 1381 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
ATF1P18846 TUBGCP2-203ENST00000368563 4218 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
ATF1P18846 PROZ-202ENST00000375547 1488 ntAPPRIS P3 TSL 1 (best) BASIC14.16□□□□□ -0.14
ATF1P18846 RHCE-201ENST00000294413 1591 ntAPPRIS P2 TSL 1 (best) BASIC14.16□□□□□ -0.14
ATF1P18846 AP1M1-202ENST00000429941 1578 ntTSL 2 BASIC14.16□□□□□ -0.14
ATF1P18846 BAG1-210ENST00000634734 3786 ntAPPRIS ALT2 TSL 1 (best) BASIC14.16□□□□□ -0.14
ATF1P18846 BET1L-201ENST00000325147 2916 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
ATF1P18846 RREB1-204ENST00000379938 8778 ntAPPRIS P3 TSL 1 (best) BASIC14.16□□□□□ -0.14
ATF1P18846 WRAP73-202ENST00000378322 1998 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
ATF1P18846 GDF2-201ENST00000581492 1955 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
ATF1P18846 MKS1-204ENST00000537529 2083 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
ATF1P18846 LIPE-AS1-205ENST00000594688 2383 ntTSL 2 BASIC14.16□□□□□ -0.14
ATF1P18846 ADAM15-201ENST00000271836 2799 ntAPPRIS ALT2 TSL 1 (best) BASIC14.16□□□□□ -0.14
ATF1P18846 NF2-210ENST00000413209 4733 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
ATF1P18846 ZDHHC4-206ENST00000405731 1348 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
ATF1P18846 ARPC5-201ENST00000294742 1637 ntAPPRIS ALT1 TSL 1 (best) BASIC14.15□□□□□ -0.14
ATF1P18846 THRA-203ENST00000450525 4895 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
ATF1P18846 PCDHA6-203ENST00000529310 5374 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
ATF1P18846 TNFSF13-202ENST00000349228 2036 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
ATF1P18846 POR-201ENST00000394893 2532 ntTSL 5 BASIC14.15□□□□□ -0.14
ATF1P18846 MTFMT-201ENST00000220058 2734 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
ATF1P18846 OSBPL5-210ENST00000525498 2733 ntTSL 2 BASIC14.15□□□□□ -0.14
ATF1P18846 RALGDS-202ENST00000372050 3634 ntAPPRIS P3 TSL 1 (best) BASIC14.15□□□□□ -0.14
ATF1P18846 SLC16A3-211ENST00000581287 4830 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
ATF1P18846 SIKE1-203ENST00000369528 5506 ntAPPRIS ALT1 TSL 1 (best) BASIC14.15□□□□□ -0.14
ATF1P18846 PRDM1-203ENST00000369096 5164 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
ATF1P18846 CHTF18-205ENST00000455171 3172 ntAPPRIS ALT2 TSL 2 BASIC14.15□□□□□ -0.14
ATF1P18846 KIAA1191-201ENST00000298569 2991 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
ATF1P18846 GPER1-201ENST00000297469 2778 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
ATF1P18846 FLJ16779-201ENST00000612722 7638 ntBASIC14.15□□□□□ -0.14
ATF1P18846 BRCC3-201ENST00000330045 2496 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
ATF1P18846 SDCBP-201ENST00000260130 2167 ntAPPRIS P3 TSL 1 (best) BASIC14.15□□□□□ -0.14
ATF1P18846 TUBB3-206ENST00000554444 1978 ntTSL 2 BASIC14.15□□□□□ -0.14
ATF1P18846 AL035685.1-202ENST00000637341 1688 ntTSL 5 BASIC14.15□□□□□ -0.14
ATF1P18846 SFTPC-201ENST00000318561 997 ntAPPRIS P3 TSL 1 (best) BASIC14.15□□□□□ -0.14
ATF1P18846 IPPK-202ENST00000375522 882 ntTSL 3 BASIC14.15□□□□□ -0.14
ATF1P18846 RNU1-129P-201ENST00000384064 167 ntBASIC14.15□□□□□ -0.14
ATF1P18846 HMGA1P7-201ENST00000406908 502 ntBASIC14.15□□□□□ -0.14
ATF1P18846 SLC4A1APP2-201ENST00000424054 1259 ntBASIC14.15□□□□□ -0.14
Retrieved 100 of 98,524 protein–RNA pairs in 49.7 ms