Protein–RNA interactions for Protein: P16333

NCK1, Cytoplasmic protein NCK1, humanhuman

Predictions only

Length 377 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NCK1P16333 GSK3B-201ENST00000264235 7711 ntAPPRIS ALT1 TSL 1 (best) BASIC15.26■□□□□ 0.03
NCK1P16333 KLK3-202ENST00000360617 1664 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
NCK1P16333 C14orf93-207ENST00000397382 1986 ntAPPRIS P1 TSL 5 BASIC15.26■□□□□ 0.03
NCK1P16333 BET1L-201ENST00000325147 2916 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
NCK1P16333 TAF6-209ENST00000452041 2297 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
NCK1P16333 LOX-206ENST00000639739 1626 ntTSL 5 BASIC15.26■□□□□ 0.03
NCK1P16333 GPR137C-201ENST00000321662 3888 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
NCK1P16333 MRNIP-201ENST00000292586 1238 ntAPPRIS P4 TSL 1 (best) BASIC15.26■□□□□ 0.03
NCK1P16333 YIF1B-203ENST00000339413 1225 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
NCK1P16333 CD99-202ENST00000381180 530 ntTSL 2 BASIC15.26■□□□□ 0.03
NCK1P16333 PQLC3-202ENST00000402361 696 ntTSL 2 BASIC15.26■□□□□ 0.03
NCK1P16333 RNASET2-206ENST00000476238 887 ntAPPRIS P1 TSL 5 BASIC15.26■□□□□ 0.03
NCK1P16333 AC021087.4-201ENST00000563761 564 ntBASIC15.26■□□□□ 0.03
NCK1P16333 C1QTNF1-205ENST00000578229 1294 ntTSL 4 BASIC15.26■□□□□ 0.03
NCK1P16333 AC006557.2-201ENST00000592985 1240 ntBASIC15.26■□□□□ 0.03
NCK1P16333 LINC01666-201ENST00000623794 845 ntTSL 5 BASIC15.26■□□□□ 0.03
NCK1P16333 AC064853.6-201ENST00000642029 303 ntAPPRIS P1 BASIC15.26■□□□□ 0.03
NCK1P16333 HTR3A-203ENST00000375498 2235 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
NCK1P16333 OPA1-201ENST00000361150 6330 ntTSL 5 BASIC15.26■□□□□ 0.03
NCK1P16333 HARS2-206ENST00000508522 1562 ntTSL 2 BASIC15.26■□□□□ 0.03
NCK1P16333 SMAP1-202ENST00000370452 2491 ntTSL 2 BASIC15.26■□□□□ 0.03
NCK1P16333 ZNF385A-205ENST00000546970 2494 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
NCK1P16333 EP400-203ENST00000333577 3092 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
NCK1P16333 PIP4K2C-207ENST00000550465 1532 ntTSL 2 BASIC15.26■□□□□ 0.03
NCK1P16333 GTF2H2C-201ENST00000380729 1803 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
NCK1P16333 ARHGAP27P1-BPTFP1-KPNA2P3-201ENST00000578492 2732 ntTSL 2 BASIC15.26■□□□□ 0.03
NCK1P16333 MYLK2-202ENST00000375994 2956 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
NCK1P16333 OGFOD2-224ENST00000545612 1465 ntTSL 2 BASIC15.26■□□□□ 0.03
NCK1P16333 PATZ1-204ENST00000405309 3711 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
NCK1P16333 IMPDH1-203ENST00000354269 2580 ntTSL 2 BASIC15.26■□□□□ 0.03
NCK1P16333 ACTRT2-201ENST00000378404 1421 ntAPPRIS P1 BASIC15.26■□□□□ 0.03
NCK1P16333 SYT1-201ENST00000261205 4808 ntAPPRIS P3 TSL 1 (best) BASIC15.26■□□□□ 0.03
NCK1P16333 NACAD-202ENST00000490531 4780 ntAPPRIS P1 TSL 5 BASIC15.25■□□□□ 0.03
NCK1P16333 PCYOX1L-201ENST00000274569 2546 ntAPPRIS P1 TSL 2 BASIC15.25■□□□□ 0.03
NCK1P16333 IQCF3-205ENST00000456080 1685 ntAPPRIS P1 TSL 2 BASIC15.25■□□□□ 0.03
NCK1P16333 TVP23C-203ENST00000428082 1911 ntAPPRIS ALT1 TSL 1 (best) BASIC15.25■□□□□ 0.03
NCK1P16333 ARMC6-206ENST00000535612 2488 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
NCK1P16333 PAFAH1B1-202ENST00000397195 5497 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
NCK1P16333 PATZ1-202ENST00000266269 3781 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
NCK1P16333 GSN-215ENST00000545652 2428 ntTSL 2 BASIC15.25■□□□□ 0.03
NCK1P16333 AC005885.1-204ENST00000637885 2885 ntAPPRIS P1 TSL 5 BASIC15.25■□□□□ 0.03
NCK1P16333 NFKB2-203ENST00000369966 3101 ntAPPRIS P4 TSL 1 (best) BASIC15.25■□□□□ 0.03
NCK1P16333 SLC25A4-201ENST00000281456 4440 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
NCK1P16333 PRLHR-201ENST00000239032 5446 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
NCK1P16333 ACSM2B-207ENST00000565232 2322 ntAPPRIS P1 TSL 2 BASIC15.25■□□□□ 0.03
NCK1P16333 RGPD6-202ENST00000330331 2848 ntTSL 2 BASIC15.25■□□□□ 0.03
NCK1P16333 RGPD8-202ENST00000330575 2848 ntTSL 2 BASIC15.25■□□□□ 0.03
NCK1P16333 PRKD2-201ENST00000291281 3070 ntAPPRIS P3 TSL 1 (best) BASIC15.25■□□□□ 0.03
NCK1P16333 PTBP1-203ENST00000356948 3598 ntAPPRIS ALT1 TSL 1 (best) BASIC15.25■□□□□ 0.03
NCK1P16333 NANS-201ENST00000210444 1170 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
NCK1P16333 NRN1L-201ENST00000339176 710 ntAPPRIS P2 TSL 1 (best) BASIC15.25■□□□□ 0.03
NCK1P16333 SEC61G-203ENST00000415949 732 ntAPPRIS P1 TSL 5 BASIC15.25■□□□□ 0.03
NCK1P16333 LAGE3P1-201ENST00000425356 484 ntBASIC15.25■□□□□ 0.03
NCK1P16333 ARPC4-203ENST00000433034 926 ntTSL 3 BASIC15.25■□□□□ 0.03
NCK1P16333 CBR1-203ENST00000439427 1024 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
NCK1P16333 C16orf91-201ENST00000442039 978 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
NCK1P16333 MTRF1LP2-201ENST00000506027 1122 ntBASIC15.25■□□□□ 0.03
NCK1P16333 RPL28-210ENST00000560583 1204 ntTSL 2 BASIC15.25■□□□□ 0.03
NCK1P16333 AL022328.2-201ENST00000608016 640 ntTSL 3 BASIC15.25■□□□□ 0.03
NCK1P16333 Metazoa_SRP.33-201ENST00000613468 285 ntBASIC15.25■□□□□ 0.03
NCK1P16333 ZNF445-205ENST00000617032 1291 ntTSL 5 BASIC15.25■□□□□ 0.03
NCK1P16333 AC027682.6-202ENST00000621378 795 ntTSL 2 BASIC15.25■□□□□ 0.03
NCK1P16333 AC093458.2-201ENST00000623150 629 ntBASIC15.25■□□□□ 0.03
NCK1P16333 VARS2-201ENST00000321897 4073 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
NCK1P16333 FURIN-207ENST00000618099 4345 ntAPPRIS P1 TSL 5 BASIC15.25■□□□□ 0.03
NCK1P16333 NOS1AP-205ENST00000493151 5559 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
NCK1P16333 POR-201ENST00000394893 2532 ntTSL 5 BASIC15.25■□□□□ 0.03
NCK1P16333 FBXL19-202ENST00000380310 3796 ntAPPRIS P2 TSL 2 BASIC15.25■□□□□ 0.03
NCK1P16333 BMP1-203ENST00000354870 3989 ntTSL 5 BASIC15.25■□□□□ 0.03
NCK1P16333 ARHGEF16-201ENST00000378371 2219 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
NCK1P16333 CARNMT1-202ENST00000376834 4130 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
NCK1P16333 SGK2-206ENST00000423407 1915 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
NCK1P16333 RNF32-202ENST00000317955 1682 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
NCK1P16333 IRF5-215ENST00000619830 1652 ntTSL 2 BASIC15.25■□□□□ 0.03
NCK1P16333 FYCO1-205ENST00000535325 8578 ntAPPRIS ALT2 TSL 5 BASIC15.25■□□□□ 0.03
NCK1P16333 ATP6V1E1-201ENST00000253413 1402 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
NCK1P16333 TMEM220-202ENST00000455996 1402 ntAPPRIS ALT2 TSL 1 (best) BASIC15.25■□□□□ 0.03
NCK1P16333 FAM160A2-203ENST00000524416 3327 ntTSL 2 BASIC15.25■□□□□ 0.03
NCK1P16333 CXorf38-201ENST00000327877 2118 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
NCK1P16333 AC016757.1-205ENST00000470346 1888 ntTSL 2 BASIC15.25■□□□□ 0.03
NCK1P16333 PODN-202ENST00000371500 3287 ntAPPRIS ALT2 TSL 1 (best) BASIC15.25■□□□□ 0.03
NCK1P16333 SLC35A2-204ENST00000376521 3047 ntAPPRIS ALT1 TSL 1 (best) BASIC15.25■□□□□ 0.03
NCK1P16333 AC009802.1-201ENST00000637973 1609 ntTSL 5 BASIC15.25■□□□□ 0.03
NCK1P16333 MBNL1-202ENST00000282488 6458 ntTSL 5 BASIC15.24■□□□□ 0.03
NCK1P16333 GPER1-201ENST00000297469 2778 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
NCK1P16333 LIMK2-203ENST00000340552 2789 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
NCK1P16333 TP73-204ENST00000378280 2062 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
NCK1P16333 PUF60-201ENST00000313352 1804 ntAPPRIS ALT1 TSL 1 (best) BASIC15.24■□□□□ 0.03
NCK1P16333 MAP7-207ENST00000616617 4326 ntAPPRIS ALT2 TSL 5 BASIC15.24■□□□□ 0.03
NCK1P16333 AC114490.1-201ENST00000417456 3163 ntTSL 2 BASIC15.24■□□□□ 0.03
NCK1P16333 DLX4-201ENST00000240306 2034 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
NCK1P16333 PVR-204ENST00000406449 1344 ntAPPRIS ALT2 TSL 1 (best) BASIC15.24■□□□□ 0.03
NCK1P16333 TUBB3-206ENST00000554444 1978 ntTSL 2 BASIC15.24■□□□□ 0.03
NCK1P16333 HTD2-201ENST00000461393 1508 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
NCK1P16333 CCDC189-204ENST00000541260 1531 ntTSL 5 BASIC15.24■□□□□ 0.03
NCK1P16333 ACOXL-201ENST00000340561 2188 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
NCK1P16333 MBD1-205ENST00000353909 2820 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
NCK1P16333 AC007686.3-201ENST00000619017 3487 ntBASIC15.24■□□□□ 0.03
NCK1P16333 LIPE-AS1-205ENST00000594688 2383 ntTSL 2 BASIC15.24■□□□□ 0.03
NCK1P16333 CYB561-219ENST00000584031 3200 ntTSL 2 BASIC15.24■□□□□ 0.03
Retrieved 100 of 98,524 protein–RNA pairs in 82 ms