Protein–RNA interactions for Protein: P13995

MTHFD2, Bifunctional methylenetetrahydrofolate dehydrogenase/cyclohydrolase, mitochondrial, humanhuman

Predictions only

Length 350 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MTHFD2P13995 SCAF1-201ENST00000360565 4306 ntAPPRIS P2 TSL 2 BASIC15.67■□□□□ 0.1
MTHFD2P13995 TRPC4AP-201ENST00000252015 3226 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
MTHFD2P13995 GRB2-202ENST00000316804 3248 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
MTHFD2P13995 ADGRB2-212ENST00000527361 4919 ntAPPRIS ALT2 TSL 1 (best) BASIC15.67■□□□□ 0.1
MTHFD2P13995 BID-213ENST00000615414 2236 ntTSL 5 BASIC15.67■□□□□ 0.1
MTHFD2P13995 PCBP4-205ENST00000461554 2147 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
MTHFD2P13995 ASB1-201ENST00000264607 6994 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
MTHFD2P13995 DFNA5-202ENST00000409775 1689 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
MTHFD2P13995 API5-202ENST00000420461 2009 ntTSL 2 BASIC15.67■□□□□ 0.1
MTHFD2P13995 TAF15-205ENST00000603777 2011 ntAPPRIS ALT2 TSL 5 BASIC15.67■□□□□ 0.1
MTHFD2P13995 NKPD1-201ENST00000317951 4233 ntAPPRIS P1 TSL 2 BASIC15.67■□□□□ 0.1
MTHFD2P13995 PARP16-201ENST00000261888 2731 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
MTHFD2P13995 PDE1B-201ENST00000243052 3444 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
MTHFD2P13995 ZNF19-208ENST00000565637 2612 ntTSL 2 BASIC15.66■□□□□ 0.1
MTHFD2P13995 NR1H3-235ENST00000616973 1919 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
MTHFD2P13995 MINK1-202ENST00000355280 4961 ntAPPRIS P4 TSL 1 (best) BASIC15.66■□□□□ 0.1
MTHFD2P13995 AP000866.1-201ENST00000499143 2886 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
MTHFD2P13995 FOXH1-201ENST00000377317 2503 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
MTHFD2P13995 ITGA3-202ENST00000320031 4888 ntAPPRIS P2 TSL 1 (best) BASIC15.66■□□□□ 0.1
MTHFD2P13995 SLC35C2-202ENST00000317734 2175 ntTSL 2 BASIC15.66■□□□□ 0.1
MTHFD2P13995 CD5L-201ENST00000368174 2191 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
MTHFD2P13995 AC006486.2-201ENST00000624246 2199 ntBASIC15.66■□□□□ 0.1
MTHFD2P13995 BABAM1-201ENST00000359435 1472 ntAPPRIS P3 TSL 1 (best) BASIC15.66■□□□□ 0.1
MTHFD2P13995 CD1E-212ENST00000368167 1458 ntAPPRIS P4 TSL 1 (best) BASIC15.66■□□□□ 0.1
MTHFD2P13995 CYP4F2-202ENST00000221700 2407 ntAPPRIS P2 TSL 1 (best) BASIC15.66■□□□□ 0.1
MTHFD2P13995 WIZ-206ENST00000599686 3644 ntTSL 5 BASIC15.66■□□□□ 0.1
MTHFD2P13995 MAP4K1-203ENST00000586296 1363 ntTSL 5 BASIC15.66■□□□□ 0.1
MTHFD2P13995 GLB1L2-201ENST00000339772 3152 ntAPPRIS P1 TSL 5 BASIC15.66■□□□□ 0.1
MTHFD2P13995 MCF2L-232ENST00000535094 3752 ntAPPRIS ALT2 TSL 2 BASIC15.66■□□□□ 0.1
MTHFD2P13995 TCTN1-202ENST00000397655 1879 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
MTHFD2P13995 MPL-202ENST00000413998 1887 ntAPPRIS ALT2 TSL 1 (best) BASIC15.66■□□□□ 0.1
MTHFD2P13995 RPS27A-201ENST00000272317 1071 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
MTHFD2P13995 CCNL1-201ENST00000295925 549 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
MTHFD2P13995 SPACA4-201ENST00000321762 972 ntAPPRIS P1 BASIC15.66■□□□□ 0.1
MTHFD2P13995 PTMS-202ENST00000389462 773 ntTSL 2 BASIC15.66■□□□□ 0.1
MTHFD2P13995 YBX2P1-201ENST00000394192 760 ntBASIC15.66■□□□□ 0.1
MTHFD2P13995 AC004987.2-201ENST00000395959 1148 ntBASIC15.66■□□□□ 0.1
MTHFD2P13995 MIR940-201ENST00000401276 94 ntBASIC15.66■□□□□ 0.1
MTHFD2P13995 CAPG-203ENST00000409670 1183 ntAPPRIS P1 TSL 5 BASIC15.66■□□□□ 0.1
MTHFD2P13995 LINC00029-202ENST00000414668 1117 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
MTHFD2P13995 AC004832.2-201ENST00000426397 482 ntBASIC15.66■□□□□ 0.1
MTHFD2P13995 C21orf33-205ENST00000427803 1077 ntTSL 2 BASIC15.66■□□□□ 0.1
MTHFD2P13995 ZFAND2B-212ENST00000444522 1199 ntAPPRIS P1 TSL 5 BASIC15.66■□□□□ 0.1
MTHFD2P13995 RNA5SP410-201ENST00000516285 106 ntBASIC15.66■□□□□ 0.1
MTHFD2P13995 AL137786.1-202ENST00000555496 789 ntTSL 5 BASIC15.66■□□□□ 0.1
MTHFD2P13995 LINC00623-204ENST00000617702 746 ntTSL 5 BASIC15.66■□□□□ 0.1
MTHFD2P13995 ALOX15B-204ENST00000572022 2396 ntTSL 2 BASIC15.66■□□□□ 0.1
MTHFD2P13995 TMEM143-203ENST00000435956 2272 ntTSL 2 BASIC15.66■□□□□ 0.1
MTHFD2P13995 KCNC2-207ENST00000548513 3026 ntAPPRIS ALT2 TSL 1 (best) BASIC15.66■□□□□ 0.1
MTHFD2P13995 PTOV1-219ENST00000601638 1413 ntTSL 5 BASIC15.66■□□□□ 0.1
MTHFD2P13995 AC136759.1-203ENST00000527477 2196 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
MTHFD2P13995 STK40-202ENST00000373129 3846 ntAPPRIS P3 TSL 1 (best) BASIC15.66■□□□□ 0.1
MTHFD2P13995 YY1AP1-210ENST00000368339 3073 ntAPPRIS ALT2 TSL 2 BASIC15.66■□□□□ 0.1
MTHFD2P13995 GRAMD4-203ENST00000408031 2834 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
MTHFD2P13995 TMEM40-202ENST00000314124 2308 ntAPPRIS P3 TSL 2 BASIC15.66■□□□□ 0.1
MTHFD2P13995 TFB2M-201ENST00000366514 1848 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
MTHFD2P13995 RAB7A-203ENST00000482525 1589 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
MTHFD2P13995 HSP90B1-201ENST00000299767 2858 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
MTHFD2P13995 CNOT8-202ENST00000403027 2604 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
MTHFD2P13995 SPRY1-207ENST00000610581 2608 ntAPPRIS P1 TSL 3 BASIC15.65■□□□□ 0.1
MTHFD2P13995 CHRD-201ENST00000204604 3521 ntAPPRIS P3 TSL 1 (best) BASIC15.65■□□□□ 0.1
MTHFD2P13995 ABHD11-201ENST00000222800 1483 ntAPPRIS P3 TSL 1 (best) BASIC15.65■□□□□ 0.1
MTHFD2P13995 JAKMIP1-204ENST00000409831 2371 ntAPPRIS P1 TSL 2 BASIC15.65■□□□□ 0.1
MTHFD2P13995 MRI1-202ENST00000319545 3027 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
MTHFD2P13995 NPL-204ENST00000367554 3027 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
MTHFD2P13995 RPN1-207ENST00000497289 2137 ntTSL 2 BASIC15.65■□□□□ 0.1
MTHFD2P13995 AL109954.1-202ENST00000564051 2148 ntBASIC15.65■□□□□ 0.1
MTHFD2P13995 SLC4A3-201ENST00000273063 4246 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
MTHFD2P13995 APLP1-202ENST00000537454 2266 ntTSL 2 BASIC15.65■□□□□ 0.1
MTHFD2P13995 RUFY2-204ENST00000399200 2685 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
MTHFD2P13995 LINC00996-201ENST00000477392 2043 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
MTHFD2P13995 SNRPD3-201ENST00000215829 1763 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
MTHFD2P13995 RNF167-211ENST00000575111 1757 ntAPPRIS P3 TSL 1 (best) BASIC15.65■□□□□ 0.1
MTHFD2P13995 RTN4RL1-201ENST00000331238 3625 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
MTHFD2P13995 DAPK1-202ENST00000408954 5892 ntAPPRIS P1 TSL 2 BASIC15.65■□□□□ 0.1
MTHFD2P13995 MAPK3-212ENST00000484663 2567 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
MTHFD2P13995 HCN1-201ENST00000303230 9885 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
MTHFD2P13995 GMPPA-202ENST00000341142 1524 ntAPPRIS P1 TSL 5 BASIC15.65■□□□□ 0.1
MTHFD2P13995 RUNX2-201ENST00000359524 5390 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
MTHFD2P13995 DUSP18-201ENST00000334679 2479 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
MTHFD2P13995 SCLT1-208ENST00000506368 2096 ntAPPRIS ALT2 TSL 1 (best) BASIC15.65■□□□□ 0.1
MTHFD2P13995 AC023157.3-201ENST00000619086 2088 ntBASIC15.65■□□□□ 0.1
MTHFD2P13995 TCEAL2-202ENST00000372780 1100 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
MTHFD2P13995 NDUFAF3-203ENST00000395458 808 ntTSL 2 BASIC15.65■□□□□ 0.1
MTHFD2P13995 CBR1-202ENST00000399191 838 ntTSL 3 BASIC15.65■□□□□ 0.1
MTHFD2P13995 TMEM210-201ENST00000413619 873 ntAPPRIS P1 TSL 5 BASIC15.65■□□□□ 0.1
MTHFD2P13995 SPDYE11-202ENST00000450699 704 ntBASIC15.65■□□□□ 0.1
MTHFD2P13995 KRT8P23-201ENST00000560090 1207 ntBASIC15.65■□□□□ 0.1
MTHFD2P13995 SPDYE9P-201ENST00000570642 692 ntBASIC15.65■□□□□ 0.1
MTHFD2P13995 AC087741.1-203ENST00000576824 820 ntTSL 3 BASIC15.65■□□□□ 0.1
MTHFD2P13995 KF456478.1-201ENST00000585980 472 ntTSL 3 BASIC15.65■□□□□ 0.1
MTHFD2P13995 HNRNPDL-206ENST00000602300 1291 ntAPPRIS ALT2 TSL 1 (best) BASIC15.65■□□□□ 0.1
MTHFD2P13995 SPDYE10P-202ENST00000612005 668 ntBASIC15.65■□□□□ 0.1
MTHFD2P13995 SPDYE8P-202ENST00000612377 668 ntBASIC15.65■□□□□ 0.1
MTHFD2P13995 C20orf181-201ENST00000623918 480 ntBASIC15.65■□□□□ 0.1
MTHFD2P13995 ILDR1-202ENST00000344209 2226 ntAPPRIS ALT2 TSL 1 (best) BASIC15.65■□□□□ 0.1
MTHFD2P13995 REPS1-208ENST00000450536 4537 ntAPPRIS ALT1 TSL 1 (best) BASIC15.65■□□□□ 0.1
MTHFD2P13995 LRRC58-201ENST00000295628 7903 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
MTHFD2P13995 DCAF17-211ENST00000539783 5623 ntAPPRIS ALT2 TSL 5 BASIC15.65■□□□□ 0.1
MTHFD2P13995 NFATC4-231ENST00000557451 5613 ntAPPRIS ALT2 TSL 1 (best) BASIC15.65■□□□□ 0.1
Retrieved 100 of 98,524 protein–RNA pairs in 68.7 ms