Protein–RNA interactions for Protein: P10276

RARA, Retinoic acid receptor alpha, humanhuman

Predictions only

Length 462 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RARAP10276 WASHC2C-204ENST00000374362 4623 ntAPPRIS P3 TSL 1 (best) BASIC16.91■□□□□ 0.3
RARAP10276 LLGL2-201ENST00000167462 3480 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
RARAP10276 LINC00391-201ENST00000433569 1844 ntTSL 5 BASIC16.91■□□□□ 0.3
RARAP10276 AC136621.1-201ENST00000624017 2304 ntBASIC16.91■□□□□ 0.3
RARAP10276 POMT1-205ENST00000404875 2821 ntTSL 2 BASIC16.91■□□□□ 0.3
RARAP10276 AC012313.3-202ENST00000599109 3322 ntTSL 5 BASIC16.91■□□□□ 0.3
RARAP10276 SLC37A1-201ENST00000352133 3664 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
RARAP10276 SYN1-202ENST00000340666 3172 ntAPPRIS ALT2 TSL 1 (best) BASIC16.91■□□□□ 0.3
RARAP10276 ATP11A-AS1-201ENST00000446442 2192 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
RARAP10276 NBPF15-202ENST00000488031 4535 ntAPPRIS P1 TSL 5 BASIC16.91■□□□□ 0.3
RARAP10276 DEPDC7-202ENST00000311388 2012 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
RARAP10276 PTPRN2-201ENST00000389413 4723 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
RARAP10276 OSR2-209ENST00000522510 1528 ntAPPRIS P1 TSL 2 BASIC16.91■□□□□ 0.3
RARAP10276 LRRC57-202ENST00000397130 2384 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
RARAP10276 ACOX3-202ENST00000413009 2374 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
RARAP10276 GPS1-208ENST00000578552 1874 ntAPPRIS ALT1 TSL 1 (best) BASIC16.9■□□□□ 0.3
RARAP10276 ANKMY2-201ENST00000306999 2555 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
RARAP10276 RNF34-202ENST00000392464 1722 ntTSL 5 BASIC16.9■□□□□ 0.3
RARAP10276 DMTN-202ENST00000358242 2772 ntTSL 5 BASIC16.9■□□□□ 0.3
RARAP10276 SLC26A1-202ENST00000398516 3109 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
RARAP10276 TRA2B-205ENST00000453386 2952 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
RARAP10276 RAB7A-203ENST00000482525 1589 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
RARAP10276 CES4A-207ENST00000540947 2284 ntAPPRIS P2 TSL 2 BASIC16.9■□□□□ 0.3
RARAP10276 PPP6R1-203ENST00000587283 2953 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
RARAP10276 CA10-203ENST00000451037 3189 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
RARAP10276 MPP2-208ENST00000520305 2111 ntTSL 2 BASIC16.9■□□□□ 0.3
RARAP10276 WDR45-201ENST00000322995 1444 ntTSL 5 BASIC16.9■□□□□ 0.3
RARAP10276 DHFR-201ENST00000439211 3917 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
RARAP10276 MBNL1-201ENST00000282486 6422 ntAPPRIS P4 TSL 5 BASIC16.9■□□□□ 0.3
RARAP10276 TAS1R1-201ENST00000333172 2892 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
RARAP10276 MED19-201ENST00000337672 1637 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
RARAP10276 MSI2-204ENST00000442934 1624 ntTSL 2 BASIC16.9■□□□□ 0.3
RARAP10276 AC009242.1-201ENST00000634300 2706 ntTSL 5 BASIC16.9■□□□□ 0.3
RARAP10276 BAX-203ENST00000354470 433 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
RARAP10276 ZNF593-202ENST00000374266 675 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
RARAP10276 HIST1H2BD-202ENST00000377777 496 ntAPPRIS P1 BASIC16.9■□□□□ 0.3
RARAP10276 HMGN1-203ENST00000380748 829 ntTSL 3 BASIC16.9■□□□□ 0.3
RARAP10276 ITGB2-204ENST00000397846 422 ntTSL 2 BASIC16.9■□□□□ 0.3
RARAP10276 MSRB1-202ENST00000399753 847 ntTSL 3 BASIC16.9■□□□□ 0.3
RARAP10276 HAUS4P1-201ENST00000406739 1145 ntBASIC16.9■□□□□ 0.3
RARAP10276 CAPG-203ENST00000409670 1183 ntAPPRIS P1 TSL 5 BASIC16.9■□□□□ 0.3
RARAP10276 AC105233.2-201ENST00000523697 349 ntBASIC16.9■□□□□ 0.3
RARAP10276 FAM86C2P-203ENST00000528684 1004 ntBASIC16.9■□□□□ 0.3
RARAP10276 AF228730.5-201ENST00000530288 346 ntBASIC16.9■□□□□ 0.3
RARAP10276 AP002770.1-201ENST00000540547 428 ntTSL 4 BASIC16.9■□□□□ 0.3
RARAP10276 ZPBP2-204ENST00000584588 1277 ntTSL 5 BASIC16.9■□□□□ 0.3
RARAP10276 AC006116.8-201ENST00000587004 987 ntTSL 2 BASIC16.9■□□□□ 0.3
RARAP10276 AC008267.7-201ENST00000624570 1194 ntBASIC16.9■□□□□ 0.3
RARAP10276 KIF18B-203ENST00000590129 2569 ntAPPRIS ALT2 TSL 1 (best) BASIC16.9■□□□□ 0.3
RARAP10276 BORCS8-203ENST00000477565 1489 ntAPPRIS ALT1 TSL 1 (best) BASIC16.9■□□□□ 0.3
RARAP10276 CDC42BPG-201ENST00000342711 5742 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
RARAP10276 GRIK5-204ENST00000593562 3308 ntAPPRIS P1 TSL 5 BASIC16.9■□□□□ 0.3
RARAP10276 C12orf40-202ENST00000405531 1656 ntAPPRIS ALT2 TSL 1 (best) BASIC16.9■□□□□ 0.3
RARAP10276 PCDHB6-202ENST00000622991 2608 ntTSL 2 BASIC16.9■□□□□ 0.3
RARAP10276 ELP5-201ENST00000354429 1304 ntAPPRIS P2 TSL 5 BASIC16.9■□□□□ 0.3
RARAP10276 CARD11-203ENST00000396946 4366 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
RARAP10276 FBLIM1-201ENST00000332305 1530 ntTSL 2 BASIC16.9■□□□□ 0.3
RARAP10276 GMPPA-202ENST00000341142 1524 ntAPPRIS P1 TSL 5 BASIC16.9■□□□□ 0.3
RARAP10276 NFYC-210ENST00000425457 1536 ntTSL 2 BASIC16.9■□□□□ 0.3
RARAP10276 MIEF2-203ENST00000395704 2879 ntTSL 2 BASIC16.9■□□□□ 0.3
RARAP10276 CHRFAM7A-203ENST00000401522 1913 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
RARAP10276 POLR1D-212ENST00000630983 1931 ntTSL 5 BASIC16.9■□□□□ 0.3
RARAP10276 CD300LG-204ENST00000539718 1399 ntAPPRIS ALT2 TSL 1 (best) BASIC16.89■□□□□ 0.3
RARAP10276 COLEC11-209ENST00000418971 1595 ntTSL 2 BASIC16.89■□□□□ 0.3
RARAP10276 RAB22A-201ENST00000244040 8670 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.3
RARAP10276 SLC6A13-201ENST00000343164 2185 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.3
RARAP10276 SLC20A1-201ENST00000272542 3381 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.3
RARAP10276 LONP1-213ENST00000590729 2626 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
RARAP10276 TMEM220-202ENST00000455996 1402 ntAPPRIS ALT2 TSL 1 (best) BASIC16.89■□□□□ 0.29
RARAP10276 WIPF3-202ENST00000409123 3491 ntAPPRIS ALT2 TSL 5 BASIC16.89■□□□□ 0.29
RARAP10276 ITGB7-201ENST00000267082 2867 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
RARAP10276 CRY2-201ENST00000417225 2053 ntTSL 2 BASIC16.89■□□□□ 0.29
RARAP10276 NRSN2-210ENST00000621012 1852 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
RARAP10276 TNRC18-202ENST00000399434 1459 ntTSL 2 BASIC16.89■□□□□ 0.29
RARAP10276 TMEM263-201ENST00000280756 3362 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
RARAP10276 NKG7-201ENST00000221978 843 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
RARAP10276 TPM2-201ENST00000329305 1018 ntAPPRIS ALT1 TSL 2 BASIC16.89■□□□□ 0.29
RARAP10276 PPP1R27-201ENST00000330261 782 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
RARAP10276 SLC25A27-201ENST00000371347 2963 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
RARAP10276 CLIC1-208ENST00000375784 1254 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
RARAP10276 HCCS-203ENST00000380763 1000 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
RARAP10276 NDUFA4L2-201ENST00000393825 1186 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
RARAP10276 AC062015.1-201ENST00000423838 1134 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
RARAP10276 GPX1P2-201ENST00000429271 606 ntBASIC16.89■□□□□ 0.29
RARAP10276 AL049569.1-201ENST00000446261 636 ntTSL 3 BASIC16.89■□□□□ 0.29
RARAP10276 ZNF655-216ENST00000449244 544 ntTSL 4 BASIC16.89■□□□□ 0.29
RARAP10276 ALG1L5P-201ENST00000482043 771 ntBASIC16.89■□□□□ 0.29
RARAP10276 AC098859.1-201ENST00000502915 1238 ntBASIC16.89■□□□□ 0.29
RARAP10276 AC009567.1-201ENST00000515071 525 ntTSL 4 BASIC16.89■□□□□ 0.29
RARAP10276 KRT8P48-201ENST00000515599 1220 ntBASIC16.89■□□□□ 0.29
RARAP10276 HELT-204ENST00000515777 841 ntAPPRIS P4 TSL 1 (best) BASIC16.89■□□□□ 0.29
RARAP10276 MTDHP5-201ENST00000598980 586 ntBASIC16.89■□□□□ 0.29
RARAP10276 NKG7-205ENST00000600427 520 ntTSL 3 BASIC16.89■□□□□ 0.29
RARAP10276 HNRNPDL-206ENST00000602300 1291 ntAPPRIS ALT2 TSL 1 (best) BASIC16.89■□□□□ 0.29
RARAP10276 AC026120.1-201ENST00000611536 926 ntBASIC16.89■□□□□ 0.29
RARAP10276 SPTSSB-204ENST00000617024 1292 ntBASIC16.89■□□□□ 0.29
RARAP10276 CKMT1B-215ENST00000627381 1074 ntTSL 5 BASIC16.89■□□□□ 0.29
RARAP10276 HNRNPH1-250ENST00000630639 123 ntTSL 5 BASIC16.89■□□□□ 0.29
RARAP10276 KCNMA1-201ENST00000286627 6194 ntAPPRIS P3 TSL 1 (best) BASIC16.89■□□□□ 0.29
RARAP10276 C16orf58-211ENST00000570164 2783 ntAPPRIS ALT1 TSL 5 BASIC16.89■□□□□ 0.29
Retrieved 100 of 98,524 protein–RNA pairs in 54.5 ms