Protein–RNA interactions for Protein: P06400

RB1, Retinoblastoma-associated protein, humanhuman

Predictions only

Length 928 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RB1P06400 AGER-206ENST00000375070 1463 ntTSL 5 BASIC16.86■□□□□ 0.29
RB1P06400 AGER-208ENST00000438221 1493 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
RB1P06400 MINDY2-202ENST00000450403 4820 ntAPPRIS ALT2 TSL 1 (best) BASIC16.86■□□□□ 0.29
RB1P06400 FAM135A-209ENST00000505769 4806 ntTSL 5 BASIC16.86■□□□□ 0.29
RB1P06400 CDPF1-204ENST00000404744 1541 ntTSL 3 BASIC16.86■□□□□ 0.29
RB1P06400 ACP5-202ENST00000412435 1527 ntAPPRIS P1 TSL 2 BASIC16.86■□□□□ 0.29
RB1P06400 AC010478.1-202ENST00000559112 2367 ntTSL 2 BASIC16.86■□□□□ 0.29
RB1P06400 WHAMMP3-203ENST00000621139 4494 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
RB1P06400 DTX2-202ENST00000413936 2472 ntAPPRIS P3 TSL 1 (best) BASIC16.86■□□□□ 0.29
RB1P06400 SYNPO-201ENST00000307662 5374 ntAPPRIS P3 TSL 1 (best) BASIC16.86■□□□□ 0.29
RB1P06400 KRT86-201ENST00000293525 2091 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
RB1P06400 CCT7-216ENST00000540468 1674 ntTSL 2 BASIC16.86■□□□□ 0.29
RB1P06400 AC005833.1-201ENST00000280684 4237 ntAPPRIS P1 BASIC16.86■□□□□ 0.29
RB1P06400 RPL18A-201ENST00000222247 665 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
RB1P06400 COX6A2-201ENST00000287490 440 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
RB1P06400 CXorf38-201ENST00000327877 2118 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
RB1P06400 TREML1-201ENST00000373127 1194 ntAPPRIS ALT2 TSL 1 (best) BASIC16.86■□□□□ 0.29
RB1P06400 NGDN-202ENST00000408901 1143 ntAPPRIS ALT2 TSL 1 (best) BASIC16.86■□□□□ 0.29
RB1P06400 AC080129.2-201ENST00000418353 430 ntTSL 3 BASIC16.86■□□□□ 0.29
RB1P06400 LARGE-AS1-202ENST00000424291 1065 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
RB1P06400 RFPL4A-201ENST00000434937 1035 ntAPPRIS P1 TSL 5 BASIC16.86■□□□□ 0.29
RB1P06400 AL691459.1-201ENST00000438589 407 ntTSL 3 BASIC16.86■□□□□ 0.29
RB1P06400 BTNL8-205ENST00000505126 1294 ntTSL 2 BASIC16.86■□□□□ 0.29
RB1P06400 ZNF767P-206ENST00000513792 565 ntBASIC16.86■□□□□ 0.29
RB1P06400 AC004803.1-204ENST00000543290 512 ntTSL 4 BASIC16.86■□□□□ 0.29
RB1P06400 TMEM219-203ENST00000561899 1249 ntAPPRIS P1 TSL 2 BASIC16.86■□□□□ 0.29
RB1P06400 C2orf69P2-201ENST00000562032 1123 ntBASIC16.86■□□□□ 0.29
RB1P06400 NFATC1-210ENST00000587635 2195 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
RB1P06400 C8orf34-206ENST00000518698 2223 ntAPPRIS P2 TSL 2 BASIC16.86■□□□□ 0.29
RB1P06400 MUM1-216ENST00000627377 2235 ntAPPRIS ALT2 TSL 5 BASIC16.86■□□□□ 0.29
RB1P06400 SBNO2-202ENST00000438103 4537 ntAPPRIS ALT2 TSL 2 BASIC16.86■□□□□ 0.29
RB1P06400 SIRT1-201ENST00000212015 4094 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
RB1P06400 CPT2-208ENST00000636891 2746 ntTSL 5 BASIC16.86■□□□□ 0.29
RB1P06400 CPT2-210ENST00000637252 2739 ntTSL 5 BASIC16.86■□□□□ 0.29
RB1P06400 SLC47A2-202ENST00000350657 2285 ntAPPRIS ALT2 TSL 1 (best) BASIC16.86■□□□□ 0.29
RB1P06400 CELF4-221ENST00000601019 1836 ntAPPRIS ALT1 TSL 5 BASIC16.86■□□□□ 0.29
RB1P06400 HLF-201ENST00000226067 5547 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
RB1P06400 FZD10-201ENST00000229030 3281 ntAPPRIS P1 BASIC16.86■□□□□ 0.29
RB1P06400 FZD10-202ENST00000539839 3282 ntBASIC16.86■□□□□ 0.29
RB1P06400 TXNDC2-201ENST00000306084 1873 ntAPPRIS ALT2 TSL 1 (best) BASIC16.86■□□□□ 0.29
RB1P06400 SPIDR-227ENST00000541342 3311 ntAPPRIS ALT2 TSL 2 BASIC16.86■□□□□ 0.29
RB1P06400 SMARCC2-202ENST00000347471 3839 ntAPPRIS ALT2 TSL 1 (best) BASIC16.86■□□□□ 0.29
RB1P06400 AL355987.1-201ENST00000435202 2420 ntAPPRIS P1 TSL 2 BASIC16.86■□□□□ 0.29
RB1P06400 AL163636.2-201ENST00000553909 1498 ntAPPRIS P1 TSL 2 BASIC16.86■□□□□ 0.29
RB1P06400 CDCP1-201ENST00000296129 6006 ntAPPRIS P3 TSL 1 (best) BASIC16.86■□□□□ 0.29
RB1P06400 TUBA3E-201ENST00000312988 1542 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
RB1P06400 AC141586.5-201ENST00000624546 2050 ntBASIC16.85■□□□□ 0.29
RB1P06400 ETV7-207ENST00000620358 1599 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
RB1P06400 ADORA2A-213ENST00000610595 2736 ntAPPRIS P1 TSL 2 BASIC16.85■□□□□ 0.29
RB1P06400 WIF1-201ENST00000286574 2238 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
RB1P06400 EIF4E1B-203ENST00000504597 1676 ntAPPRIS P1 TSL 5 BASIC16.85■□□□□ 0.29
RB1P06400 FENDRR-206ENST00000599749 2843 ntTSL 3 BASIC16.85■□□□□ 0.29
RB1P06400 MFSD11-220ENST00000621483 2850 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
RB1P06400 LRRC20-203ENST00000358141 2924 ntTSL 2 BASIC16.85■□□□□ 0.29
RB1P06400 CEP120-201ENST00000306467 4900 ntAPPRIS P1 TSL 5 BASIC16.85■□□□□ 0.29
RB1P06400 C2orf48-201ENST00000381786 1897 ntTSL 2 BASIC16.85■□□□□ 0.29
RB1P06400 PLA2G2D-202ENST00000617227 1856 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
RB1P06400 CXADR-201ENST00000284878 6254 ntAPPRIS P3 TSL 1 (best) BASIC16.85■□□□□ 0.29
RB1P06400 KLC1-202ENST00000334553 2524 ntTSL 5 BASIC16.85■□□□□ 0.29
RB1P06400 C3orf22-201ENST00000318225 1000 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
RB1P06400 AC136604.1-201ENST00000418535 575 ntBASIC16.85■□□□□ 0.29
RB1P06400 AL049698.1-202ENST00000441716 757 ntTSL 5 BASIC16.85■□□□□ 0.29
RB1P06400 GLYCTK-203ENST00000461183 889 ntTSL 3 BASIC16.85■□□□□ 0.29
RB1P06400 AC026495.1-203ENST00000557528 906 ntTSL 5 BASIC16.85■□□□□ 0.29
RB1P06400 ARL16-210ENST00000574938 751 ntTSL 2 BASIC16.85■□□□□ 0.29
RB1P06400 PLA2G4C-AS1-201ENST00000596552 568 ntTSL 3 BASIC16.85■□□□□ 0.29
RB1P06400 AC093813.1-201ENST00000605066 256 ntBASIC16.85■□□□□ 0.29
RB1P06400 AL118558.3-201ENST00000607414 1079 ntBASIC16.85■□□□□ 0.29
RB1P06400 AL022328.3-201ENST00000607943 679 ntBASIC16.85■□□□□ 0.29
RB1P06400 ACSM2B-211ENST00000567001 1988 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
RB1P06400 ENO3-206ENST00000519584 1322 ntTSL 2 BASIC16.85■□□□□ 0.29
RB1P06400 THAP12-201ENST00000260045 3300 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
RB1P06400 FDPS-202ENST00000368356 1431 ntAPPRIS P3 TSL 2 BASIC16.85■□□□□ 0.29
RB1P06400 HARS2-202ENST00000448069 1426 ntTSL 2 BASIC16.85■□□□□ 0.29
RB1P06400 CD2BP2-203ENST00000569466 1417 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
RB1P06400 PRR29-AS1-202ENST00000580942 2926 ntTSL 2 BASIC16.85■□□□□ 0.29
RB1P06400 KLK6-203ENST00000391808 1478 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
RB1P06400 PAX7-201ENST00000375375 2260 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
RB1P06400 PRPF38B-202ENST00000370022 1591 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
RB1P06400 RGS6-218ENST00000556437 1689 ntAPPRIS ALT1 TSL 1 (best) BASIC16.85■□□□□ 0.29
RB1P06400 MSTO2P-201ENST00000314835 1709 ntBASIC16.84■□□□□ 0.29
RB1P06400 TMEM138-201ENST00000278826 1848 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
RB1P06400 MFSD14A-201ENST00000370152 2777 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
RB1P06400 CD99P1-204ENST00000435581 2788 ntTSL 2 BASIC16.84■□□□□ 0.29
RB1P06400 SLC10A3-203ENST00000393586 1893 ntTSL 5 BASIC16.84■□□□□ 0.29
RB1P06400 ADCYAP1R1-203ENST00000409363 1889 ntAPPRIS ALT2 TSL 1 (best) BASIC16.84■□□□□ 0.29
RB1P06400 B3GNT9-201ENST00000449549 2917 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
RB1P06400 FTSJ1-201ENST00000019019 1986 ntAPPRIS ALT1 TSL 2 BASIC16.84■□□□□ 0.29
RB1P06400 AC060834.1-201ENST00000443027 2032 ntBASIC16.84■□□□□ 0.29
RB1P06400 CROCC2-201ENST00000443866 5382 ntAPPRIS P1 TSL 5 BASIC16.84■□□□□ 0.29
RB1P06400 TEX30-203ENST00000376022 828 ntTSL 2 BASIC16.84■□□□□ 0.29
RB1P06400 AC017104.1-201ENST00000415129 720 ntTSL 3 BASIC16.84■□□□□ 0.29
RB1P06400 AC092614.1-201ENST00000419640 909 ntTSL 3 BASIC16.84■□□□□ 0.29
RB1P06400 AHRR-211ENST00000515206 462 ntTSL 5 BASIC16.84■□□□□ 0.29
RB1P06400 AC011365.2-201ENST00000520041 810 ntTSL 5 BASIC16.84■□□□□ 0.29
RB1P06400 AP001258.2-201ENST00000529891 490 ntBASIC16.84■□□□□ 0.29
RB1P06400 AP003096.1-203ENST00000564469 563 ntTSL 3 BASIC16.84■□□□□ 0.29
RB1P06400 CR381653.1-201ENST00000622961 812 ntTSL 3 BASIC16.84■□□□□ 0.29
RB1P06400 RHD-204ENST00000417538 1333 ntAPPRIS ALT2 TSL 1 (best) BASIC16.84■□□□□ 0.29
RB1P06400 CPEB2-204ENST00000382401 5509 ntAPPRIS ALT2 TSL 1 (best) BASIC16.84■□□□□ 0.29
Retrieved 100 of 98,524 protein–RNA pairs in 26.4 ms