Protein–RNA interactions for Protein: P04440

HLA-DPB1, HLA class II histocompatibility antigen, DP beta 1 chain, humanhuman

Predictions only

Length 258 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DPB1P04440 AP000688.4-201ENST00000436303 446 ntTSL 3 BASIC14.55□□□□□ -0.08
HLA-DPB1P04440 AC093909.1-201ENST00000504731 1122 ntBASIC14.55□□□□□ -0.08
HLA-DPB1P04440 AC091180.3-201ENST00000506504 963 ntTSL 3 BASIC14.55□□□□□ -0.08
HLA-DPB1P04440 RNA5SP419-201ENST00000515908 135 ntBASIC14.55□□□□□ -0.08
HLA-DPB1P04440 SPCS2-207ENST00000530257 612 ntTSL 3 BASIC14.55□□□□□ -0.08
HLA-DPB1P04440 UBE2Q2P1-205ENST00000559871 534 ntTSL 5 BASIC14.55□□□□□ -0.08
HLA-DPB1P04440 ADAM10-217ENST00000561288 583 ntTSL 3 BASIC14.55□□□□□ -0.08
HLA-DPB1P04440 YPEL3-209ENST00000566595 796 ntAPPRIS P1 TSL 2 BASIC14.55□□□□□ -0.08
HLA-DPB1P04440 PRSS8-206ENST00000568261 1214 ntTSL 2 BASIC14.55□□□□□ -0.08
HLA-DPB1P04440 AC091167.2-201ENST00000579581 588 ntBASIC14.55□□□□□ -0.08
HLA-DPB1P04440 SCN5A-214ENST00000612060 714 ntTSL 5 BASIC14.55□□□□□ -0.08
HLA-DPB1P04440 CDK2AP1-207ENST00000618072 1144 ntTSL 3 BASIC14.55□□□□□ -0.08
HLA-DPB1P04440 AC116407.3-201ENST00000623905 1129 ntBASIC14.55□□□□□ -0.08
HLA-DPB1P04440 AC005593.1-201ENST00000624894 515 ntBASIC14.55□□□□□ -0.08
HLA-DPB1P04440 BICD1-205ENST00000550207 1328 ntTSL 3 BASIC14.55□□□□□ -0.08
HLA-DPB1P04440 REPIN1-209ENST00000479668 3182 ntTSL 2 BASIC14.55□□□□□ -0.08
HLA-DPB1P04440 IRF8-203ENST00000563180 1394 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
HLA-DPB1P04440 HGNC:18790-202ENST00000421177 4172 ntAPPRIS P1 TSL 5 BASIC14.55□□□□□ -0.08
HLA-DPB1P04440 SNTG2-202ENST00000407292 1436 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
HLA-DPB1P04440 ANKMY1-203ENST00000373318 2449 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
HLA-DPB1P04440 PDLIM1-201ENST00000329399 1452 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
HLA-DPB1P04440 SEMA4C-201ENST00000305476 3545 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
HLA-DPB1P04440 TBC1D1-203ENST00000402522 1567 ntTSL 2 BASIC14.55□□□□□ -0.08
HLA-DPB1P04440 AC119396.1-201ENST00000576789 1558 ntAPPRIS P1 TSL 5 BASIC14.55□□□□□ -0.08
HLA-DPB1P04440 BEGAIN-201ENST00000355173 2674 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
HLA-DPB1P04440 THEMIS2-202ENST00000373921 2687 ntAPPRIS P1 TSL 5 BASIC14.55□□□□□ -0.08
HLA-DPB1P04440 CPEB2-AS1-201ENST00000500394 1630 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
HLA-DPB1P04440 WDR45-202ENST00000356463 1688 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
HLA-DPB1P04440 FAM53C-202ENST00000434981 1686 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
HLA-DPB1P04440 FASTKD5-201ENST00000380266 2874 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
HLA-DPB1P04440 AC131009.4-201ENST00000624048 1740 ntBASIC14.55□□□□□ -0.08
HLA-DPB1P04440 FGD1-201ENST00000375135 4275 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
HLA-DPB1P04440 SIGLEC6-205ENST00000425629 1852 ntAPPRIS P4 TSL 2 BASIC14.55□□□□□ -0.08
HLA-DPB1P04440 NRSN2-210ENST00000621012 1852 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
HLA-DPB1P04440 SLC25A4-201ENST00000281456 4440 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
HLA-DPB1P04440 NTRK2-202ENST00000304053 8226 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
HLA-DPB1P04440 NDRG2-211ENST00000397858 2054 ntAPPRIS P4 TSL 5 BASIC14.54□□□□□ -0.08
HLA-DPB1P04440 ABI3-201ENST00000225941 2109 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
HLA-DPB1P04440 DZIP1-204ENST00000376829 3738 ntAPPRIS P4 TSL 1 (best) BASIC14.54□□□□□ -0.08
HLA-DPB1P04440 DHODH-201ENST00000219240 2426 ntAPPRIS P2 TSL 1 (best) BASIC14.54□□□□□ -0.08
HLA-DPB1P04440 EIF4G1-212ENST00000424196 5653 ntTSL 2 BASIC14.54□□□□□ -0.08
HLA-DPB1P04440 SEMA5B-201ENST00000195173 4523 ntAPPRIS ALT2 TSL 5 BASIC14.54□□□□□ -0.08
HLA-DPB1P04440 TNS2-201ENST00000314250 5010 ntAPPRIS ALT2 TSL 1 (best) BASIC14.54□□□□□ -0.08
HLA-DPB1P04440 RER1-209ENST00000605895 3044 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
HLA-DPB1P04440 ARAP2-201ENST00000303965 7514 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
HLA-DPB1P04440 CRK-202ENST00000398970 3675 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
HLA-DPB1P04440 PIH1D1-201ENST00000262265 1192 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
HLA-DPB1P04440 MRPS15-201ENST00000373116 1006 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
HLA-DPB1P04440 AC026396.1-201ENST00000419388 421 ntBASIC14.54□□□□□ -0.08
HLA-DPB1P04440 AL391069.2-202ENST00000447795 622 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
HLA-DPB1P04440 C9orf147-204ENST00000463223 863 ntTSL 3 BASIC14.54□□□□□ -0.08
HLA-DPB1P04440 NDUFB2-209ENST00000472695 503 ntTSL 5 BASIC14.54□□□□□ -0.08
HLA-DPB1P04440 CCNG1-208ENST00000510664 994 ntTSL 5 BASIC14.54□□□□□ -0.08
HLA-DPB1P04440 PENK-208ENST00000523051 772 ntTSL 5 BASIC14.54□□□□□ -0.08
HLA-DPB1P04440 CNOT8-225ENST00000524105 904 ntTSL 2 BASIC14.54□□□□□ -0.08
HLA-DPB1P04440 ZBP1-208ENST00000541799 1041 ntAPPRIS ALT2 TSL 5 BASIC14.54□□□□□ -0.08
HLA-DPB1P04440 TUBB4A-209ENST00000598006 565 ntTSL 2 BASIC14.54□□□□□ -0.08
HLA-DPB1P04440 DEF8-228ENST00000610455 816 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
HLA-DPB1P04440 FOXP1-223ENST00000622151 429 ntTSL 3 BASIC14.54□□□□□ -0.08
HLA-DPB1P04440 AC117500.6-201ENST00000624871 588 ntBASIC14.54□□□□□ -0.08
HLA-DPB1P04440 AL805961.1-202ENST00000641562 540 ntBASIC14.54□□□□□ -0.08
HLA-DPB1P04440 USP25-201ENST00000285679 3973 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
HLA-DPB1P04440 RBM14-202ENST00000393979 1426 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
HLA-DPB1P04440 RNF32-202ENST00000317955 1682 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
HLA-DPB1P04440 IQCF3-205ENST00000456080 1685 ntAPPRIS P1 TSL 2 BASIC14.54□□□□□ -0.08
HLA-DPB1P04440 WDR74-204ENST00000525239 1736 ntAPPRIS P1 TSL 2 BASIC14.54□□□□□ -0.08
HLA-DPB1P04440 PUF60-201ENST00000313352 1804 ntAPPRIS ALT1 TSL 1 (best) BASIC14.54□□□□□ -0.08
HLA-DPB1P04440 TFB2M-201ENST00000366514 1848 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
HLA-DPB1P04440 NPM2-203ENST00000397940 1874 ntAPPRIS P2 TSL 2 BASIC14.54□□□□□ -0.08
HLA-DPB1P04440 SOX14-201ENST00000306087 2055 ntAPPRIS P1 BASIC14.54□□□□□ -0.08
HLA-DPB1P04440 PLXDC1-201ENST00000315392 6252 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
HLA-DPB1P04440 DNAJC2-203ENST00000379263 2167 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
HLA-DPB1P04440 TMEM143-203ENST00000435956 2272 ntTSL 2 BASIC14.54□□□□□ -0.08
HLA-DPB1P04440 RTN1-209ENST00000611068 2647 ntTSL 5 BASIC14.54□□□□□ -0.08
HLA-DPB1P04440 CYTH2-214ENST00000641098 2721 ntAPPRIS ALT1 BASIC14.54□□□□□ -0.08
HLA-DPB1P04440 DMPK-202ENST00000343373 3227 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
HLA-DPB1P04440 DGKI-201ENST00000288490 3895 ntAPPRIS P3 TSL 5 BASIC14.54□□□□□ -0.08
HLA-DPB1P04440 ARF6-201ENST00000298316 3865 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
HLA-DPB1P04440 CRLS1-203ENST00000452938 3859 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
HLA-DPB1P04440 CBX7-201ENST00000216133 4081 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
HLA-DPB1P04440 SYT13-201ENST00000020926 5144 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
HLA-DPB1P04440 ANOS1-201ENST00000262648 6314 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
HLA-DPB1P04440 ADAMTS15-201ENST00000299164 5673 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
HLA-DPB1P04440 SPATA6-204ENST00000396199 4964 ntTSL 2 BASIC14.53□□□□□ -0.08
HLA-DPB1P04440 LRCH1-202ENST00000389797 3314 ntAPPRIS ALT2 TSL 1 (best) BASIC14.53□□□□□ -0.08
HLA-DPB1P04440 MARVELD1-201ENST00000285605 3221 ntAPPRIS P1 TSL 2 BASIC14.53□□□□□ -0.08
HLA-DPB1P04440 RNF157-202ENST00000319945 2937 ntAPPRIS ALT2 TSL 2 BASIC14.53□□□□□ -0.08
HLA-DPB1P04440 DDX1-202ENST00000381341 2817 ntAPPRIS P1 TSL 5 BASIC14.53□□□□□ -0.08
HLA-DPB1P04440 GLS2-201ENST00000311966 2623 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
HLA-DPB1P04440 TIRAP-203ENST00000392680 2068 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
HLA-DPB1P04440 ATP6AP2-201ENST00000378438 2022 ntAPPRIS ALT2 TSL 5 BASIC14.53□□□□□ -0.08
HLA-DPB1P04440 LEKR1-209ENST00000491763 1940 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
HLA-DPB1P04440 SLC2A9-201ENST00000264784 1850 ntAPPRIS P4 TSL 1 (best) BASIC14.53□□□□□ -0.08
HLA-DPB1P04440 ZSCAN18-208ENST00000595944 1768 ntTSL 2 BASIC14.53□□□□□ -0.08
HLA-DPB1P04440 TRPM2-208ENST00000621064 1669 ntTSL 5 BASIC14.53□□□□□ -0.08
HLA-DPB1P04440 NKIRAS1-202ENST00000412028 1605 ntAPPRIS ALT1 TSL 5 BASIC14.53□□□□□ -0.08
HLA-DPB1P04440 THTPA-203ENST00000554789 1595 ntTSL 2 BASIC14.53□□□□□ -0.08
HLA-DPB1P04440 IBA57-201ENST00000366711 7817 ntAPPRIS P1 TSL 2 BASIC14.53□□□□□ -0.08
HLA-DPB1P04440 AL592424.1-201ENST00000563624 1536 ntBASIC14.53□□□□□ -0.08
HLA-DPB1P04440 LMCD1-204ENST00000426878 1431 ntTSL 2 BASIC14.53□□□□□ -0.08
Retrieved 100 of 98,524 protein–RNA pairs in 32.8 ms