Protein–RNA interactions for Protein: P04198

MYCN, N-myc proto-oncogene protein, humanhuman

Predicted RBP Predictions only

Length 464 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MYCNP04198 NGFR-202ENST00000504201 1840 ntTSL 2 BASIC18.79■□□□□ 0.6
MYCNP04198 SLC25A36-201ENST00000324194 1301 ntAPPRIS ALT1 TSL 1 (best) BASIC18.79■□□□□ 0.6
MYCNP04198 MAPKAP1-202ENST00000350766 3256 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
MYCNP04198 DUS3L-201ENST00000309061 2113 ntAPPRIS P3 TSL 1 (best) BASIC18.79■□□□□ 0.6
MYCNP04198 MMD2-202ENST00000404774 2415 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
MYCNP04198 NR4A2-204ENST00000409572 2878 ntAPPRIS P1 TSL 5 BASIC18.79■□□□□ 0.6
MYCNP04198 RNF34-201ENST00000361234 2066 ntAPPRIS ALT1 TSL 1 (best) BASIC18.79■□□□□ 0.6
MYCNP04198 ERCC1-201ENST00000013807 1278 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
MYCNP04198 FIBP-201ENST00000338369 1261 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
MYCNP04198 RNU4-86P-201ENST00000410135 219 ntBASIC18.79■□□□□ 0.6
MYCNP04198 MUSTN1-201ENST00000446157 721 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
MYCNP04198 SATB1-AS1-204ENST00000453361 726 ntTSL 3 BASIC18.79■□□□□ 0.6
MYCNP04198 AC094105.1-201ENST00000509745 560 ntTSL 4 BASIC18.79■□□□□ 0.6
MYCNP04198 CCDC25-209ENST00000522915 785 ntTSL 3 BASIC18.79■□□□□ 0.6
MYCNP04198 AC084125.2-203ENST00000532766 821 ntTSL 3 BASIC18.79■□□□□ 0.6
MYCNP04198 ATF7-204ENST00000548118 774 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
MYCNP04198 MTND1P24-201ENST00000552175 861 ntBASIC18.79■□□□□ 0.6
MYCNP04198 PPHLN1-221ENST00000552761 1095 ntAPPRIS ALT2 TSL 1 (best) BASIC18.79■□□□□ 0.6
MYCNP04198 CCDC85C-204ENST00000555822 930 ntTSL 5 BASIC18.79■□□□□ 0.6
MYCNP04198 AC005225.3-201ENST00000555972 519 ntTSL 2 BASIC18.79■□□□□ 0.6
MYCNP04198 SSH2-210ENST00000582084 560 ntTSL 3 BASIC18.79■□□□□ 0.6
MYCNP04198 ATF7-212ENST00000591397 860 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
MYCNP04198 LINC00237-203ENST00000593272 630 ntTSL 4 BASIC18.79■□□□□ 0.6
MYCNP04198 AP003485.1-201ENST00000625093 753 ntBASIC18.79■□□□□ 0.6
MYCNP04198 DBI-211ENST00000627093 554 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
MYCNP04198 RTEL1-TNFRSF6B-202ENST00000482936 4931 ntAPPRIS P5 TSL 2 BASIC18.79■□□□□ 0.6
MYCNP04198 ASXL1-212ENST00000620121 5374 ntAPPRIS ALT2 TSL 5 BASIC18.79■□□□□ 0.6
MYCNP04198 BIRC8-201ENST00000426466 2026 ntAPPRIS P1 BASIC18.79■□□□□ 0.6
MYCNP04198 LINC01502-201ENST00000445997 2471 ntTSL 2 BASIC18.79■□□□□ 0.6
MYCNP04198 NFS1-202ENST00000374085 2645 ntTSL 2 BASIC18.79■□□□□ 0.6
MYCNP04198 ATP6V0E2-201ENST00000421974 2605 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
MYCNP04198 FAM172A-206ENST00000509163 1369 ntTSL 2 BASIC18.79■□□□□ 0.6
MYCNP04198 SLC25A35-205ENST00000580340 1541 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
MYCNP04198 ITGB1BP1-204ENST00000360635 4859 ntAPPRIS P1 TSL 5 BASIC18.79■□□□□ 0.6
MYCNP04198 MYEOV-201ENST00000308946 2287 ntAPPRIS P3 TSL 1 (best) BASIC18.79■□□□□ 0.6
MYCNP04198 CAPRIN1-207ENST00000529307 2266 ntAPPRIS ALT2 TSL 2 BASIC18.79■□□□□ 0.6
MYCNP04198 AC118553.2-202ENST00000638792 2729 ntAPPRIS ALT2 TSL 5 BASIC18.79■□□□□ 0.6
MYCNP04198 SNX9-201ENST00000392185 4198 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
MYCNP04198 SEPT2-208ENST00000407971 3267 ntTSL 5 BASIC18.78■□□□□ 0.6
MYCNP04198 EIF4H-201ENST00000265753 2679 ntAPPRIS P4 TSL 2 BASIC18.78■□□□□ 0.6
MYCNP04198 TEX19-201ENST00000333437 1936 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
MYCNP04198 LAT-202ENST00000360872 1459 ntAPPRIS P3 TSL 2 BASIC18.78■□□□□ 0.6
MYCNP04198 FAM131A-203ENST00000383847 1483 ntAPPRIS P1 TSL 2 BASIC18.78■□□□□ 0.6
MYCNP04198 HRAT92-201ENST00000452622 3506 ntTSL 2 BASIC18.78■□□□□ 0.6
MYCNP04198 ZNF213-206ENST00000574902 3208 ntAPPRIS P1 TSL 5 BASIC18.78■□□□□ 0.6
MYCNP04198 CARD10-201ENST00000251973 3934 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
MYCNP04198 FAM90A1-201ENST00000307435 2342 ntAPPRIS P1 TSL 2 BASIC18.78■□□□□ 0.6
MYCNP04198 LINC00574-201ENST00000420557 2318 ntTSL 2 BASIC18.78■□□□□ 0.6
MYCNP04198 PTP4A1-201ENST00000370651 5088 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
MYCNP04198 KDM6A-202ENST00000382899 5789 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
MYCNP04198 GEMIN2-202ENST00000308317 1420 ntAPPRIS P3 TSL 1 (best) BASIC18.78■□□□□ 0.6
MYCNP04198 NKG7-201ENST00000221978 843 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
MYCNP04198 C12orf10-201ENST00000267103 1192 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
MYCNP04198 SSR4-204ENST00000370087 745 ntAPPRIS P1 TSL 3 BASIC18.78■□□□□ 0.6
MYCNP04198 PDC-201ENST00000391997 1242 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
MYCNP04198 LINC01717-201ENST00000415754 527 ntTSL 5 BASIC18.78■□□□□ 0.6
MYCNP04198 COX5BP8-201ENST00000416911 349 ntBASIC18.78■□□□□ 0.6
MYCNP04198 AL355802.1-201ENST00000417591 990 ntTSL 3 BASIC18.78■□□□□ 0.6
MYCNP04198 MTCYBP7-201ENST00000419540 1134 ntBASIC18.78■□□□□ 0.6
MYCNP04198 CDK2AP2P3-201ENST00000422476 372 ntBASIC18.78■□□□□ 0.6
MYCNP04198 AP006222.1-201ENST00000442116 1292 ntTSL 5 BASIC18.78■□□□□ 0.6
MYCNP04198 RPS3AP6-201ENST00000484430 795 ntBASIC18.78■□□□□ 0.6
MYCNP04198 AHSA2-208ENST00000489653 1197 ntAPPRIS P1 TSL 5 BASIC18.78■□□□□ 0.6
MYCNP04198 LINC00992-201ENST00000504107 617 ntTSL 2 BASIC18.78■□□□□ 0.6
MYCNP04198 MRPL36-204ENST00000508987 686 ntAPPRIS P1 TSL 2 BASIC18.78■□□□□ 0.6
MYCNP04198 SNORA26.10-201ENST00000516427 141 ntBASIC18.78■□□□□ 0.6
MYCNP04198 AC018541.1-201ENST00000517706 764 ntTSL 3 BASIC18.78■□□□□ 0.6
MYCNP04198 STOM-203ENST00000538954 1257 ntTSL 5 BASIC18.78■□□□□ 0.6
MYCNP04198 FKBP11-208ENST00000550765 1030 ntAPPRIS P3 TSL 1 (best) BASIC18.78■□□□□ 0.6
MYCNP04198 AL162231.3-201ENST00000556278 902 ntAPPRIS P1 TSL 5 BASIC18.78■□□□□ 0.6
MYCNP04198 COMMD4-207ENST00000562789 746 ntTSL 2 BASIC18.78■□□□□ 0.6
MYCNP04198 AC005544.2-201ENST00000579138 229 ntTSL 5 BASIC18.78■□□□□ 0.6
MYCNP04198 SNHG15-207ENST00000582727 1039 ntTSL 2 BASIC18.78■□□□□ 0.6
MYCNP04198 NKG7-205ENST00000600427 520 ntTSL 3 BASIC18.78■□□□□ 0.6
MYCNP04198 ASNSD1-208ENST00000607690 535 ntTSL 2 BASIC18.78■□□□□ 0.6
MYCNP04198 ASNSD1-209ENST00000607829 581 ntTSL 2 BASIC18.78■□□□□ 0.6
MYCNP04198 AC018645.2-201ENST00000609151 472 ntBASIC18.78■□□□□ 0.6
MYCNP04198 AL138828.2-201ENST00000615812 383 ntBASIC18.78■□□□□ 0.6
MYCNP04198 NBL1-212ENST00000621723 2133 ntAPPRIS P3 TSL 2 BASIC18.78■□□□□ 0.6
MYCNP04198 GPR176-205ENST00000561100 2816 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
MYCNP04198 ORC5-201ENST00000297431 1958 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
MYCNP04198 SEMA6C-209ENST00000613223 1950 ntTSL 5 BASIC18.78■□□□□ 0.6
MYCNP04198 TRPM2-208ENST00000621064 1669 ntTSL 5 BASIC18.78■□□□□ 0.6
MYCNP04198 SEMA3B-209ENST00000456560 2221 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
MYCNP04198 AC005224.1-201ENST00000458492 1537 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
MYCNP04198 MITF-204ENST00000352241 4814 ntAPPRIS ALT1 TSL 1 (best) BASIC18.78■□□□□ 0.6
MYCNP04198 ECE1-203ENST00000374893 2484 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
MYCNP04198 TSPAN7-202ENST00000378482 1909 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
MYCNP04198 KAZN-201ENST00000361144 3838 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
MYCNP04198 ACVR1B-203ENST00000426655 1782 ntTSL 2 BASIC18.78■□□□□ 0.6
MYCNP04198 CDC42BPG-201ENST00000342711 5742 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
MYCNP04198 CTD-2194D22.4-201ENST00000514569 1635 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
MYCNP04198 APMAP-201ENST00000217456 2430 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
MYCNP04198 BOD1L2-201ENST00000585477 3239 ntAPPRIS P1 BASIC18.78■□□□□ 0.6
MYCNP04198 PFN2-201ENST00000239940 2261 ntAPPRIS P3 TSL 1 (best) BASIC18.77■□□□□ 0.6
MYCNP04198 LINC00668-205ENST00000581571 1748 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
MYCNP04198 MTND4P9-201ENST00000507819 1346 ntBASIC18.77■□□□□ 0.6
MYCNP04198 NPM1-204ENST00000517671 1338 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
MYCNP04198 CLN8-205ENST00000520991 1305 ntTSL 5 BASIC18.77■□□□□ 0.6
MYCNP04198 MAPK8IP1-202ENST00000395629 3180 ntTSL 5 BASIC18.77■□□□□ 0.6
Retrieved 100 of 98,524 protein–RNA pairs in 124.9 ms