Protein–RNA interactions for Protein: P02647

APOA1, Apolipoprotein A-I, humanhuman

Predictions only

Length 267 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APOA1P02647 PACSIN2-201ENST00000263246 3249 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
APOA1P02647 RUBCNL-204ENST00000378797 3206 ntAPPRIS ALT2 TSL 1 (best) BASIC14.43□□□□□ -0.1
APOA1P02647 MSI1-201ENST00000257552 2975 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
APOA1P02647 RNF222-202ENST00000399398 3062 ntAPPRIS P1 TSL 5 BASIC14.43□□□□□ -0.1
APOA1P02647 ERP29-203ENST00000546477 1698 ntTSL 3 BASIC14.42□□□□□ -0.1
APOA1P02647 MUM1-201ENST00000415183 2837 ntAPPRIS ALT2 TSL 1 (best) BASIC14.42□□□□□ -0.1
APOA1P02647 RFXANK-205ENST00000456252 1325 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
APOA1P02647 ZNF772-204ENST00000427512 5130 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
APOA1P02647 SUCO-201ENST00000263688 5556 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
APOA1P02647 TMEM155-202ENST00000394394 1753 ntAPPRIS P2 TSL 3 BASIC14.42□□□□□ -0.1
APOA1P02647 NAGK-208ENST00000455662 1778 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
APOA1P02647 SLC20A1-201ENST00000272542 3381 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
APOA1P02647 GIPC2-201ENST00000370759 3847 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
APOA1P02647 CYP26A1-202ENST00000371531 2245 ntTSL 2 BASIC14.42□□□□□ -0.1
APOA1P02647 MBD6-201ENST00000355673 4282 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
APOA1P02647 LYSMD4-204ENST00000409796 2672 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
APOA1P02647 KRT12-201ENST00000251643 1867 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
APOA1P02647 PAX3-203ENST00000344493 3109 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
APOA1P02647 MEIS3-210ENST00000561096 1883 ntAPPRIS ALT2 TSL 2 BASIC14.42□□□□□ -0.1
APOA1P02647 NIM1K-201ENST00000326035 2313 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
APOA1P02647 ATE1-203ENST00000369043 4900 ntAPPRIS ALT1 TSL 1 (best) BASIC14.42□□□□□ -0.1
APOA1P02647 DNAJC2-203ENST00000379263 2167 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
APOA1P02647 RABAC1-201ENST00000222008 821 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
APOA1P02647 BAD-201ENST00000309032 929 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
APOA1P02647 VKORC1-205ENST00000394975 1012 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
APOA1P02647 ST6GALNAC4P1-201ENST00000435385 499 ntBASIC14.42□□□□□ -0.1
APOA1P02647 AC078883.2-201ENST00000441212 558 ntTSL 3 BASIC14.42□□□□□ -0.1
APOA1P02647 HMGB3P22-201ENST00000442010 597 ntTSL 2 BASIC14.42□□□□□ -0.1
APOA1P02647 NKTR-203ENST00000442970 646 ntTSL 2 BASIC14.42□□□□□ -0.1
APOA1P02647 AC098590.1-201ENST00000468126 897 ntBASIC14.42□□□□□ -0.1
APOA1P02647 AC092597.1-201ENST00000487352 616 ntBASIC14.42□□□□□ -0.1
APOA1P02647 LINC01385-201ENST00000512310 780 ntTSL 4 BASIC14.42□□□□□ -0.1
APOA1P02647 RDH5-202ENST00000547072 1054 ntTSL 5 BASIC14.42□□□□□ -0.1
APOA1P02647 CLDN7-204ENST00000571881 735 ntTSL 3 BASIC14.42□□□□□ -0.1
APOA1P02647 SHBG-211ENST00000574539 938 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
APOA1P02647 AC097641.1-201ENST00000580671 588 ntTSL 4 BASIC14.42□□□□□ -0.1
APOA1P02647 RABAC1-208ENST00000601078 728 ntTSL 3 BASIC14.42□□□□□ -0.1
APOA1P02647 AL353801.3-201ENST00000609898 542 ntBASIC14.42□□□□□ -0.1
APOA1P02647 ZNF568-203ENST00000427117 1827 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
APOA1P02647 RENBP-202ENST00000393700 1388 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
APOA1P02647 AC011840.1-202ENST00000436477 1351 ntTSL 2 BASIC14.42□□□□□ -0.1
APOA1P02647 AP003680.1-201ENST00000598970 3660 ntBASIC14.42□□□□□ -0.1
APOA1P02647 MYADM-205ENST00000391771 3111 ntAPPRIS P1 TSL 2 BASIC14.42□□□□□ -0.1
APOA1P02647 KLK3-201ENST00000326003 1463 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
APOA1P02647 GPANK1-205ENST00000375906 2793 ntAPPRIS P1 TSL 2 BASIC14.42□□□□□ -0.1
APOA1P02647 GRK6-203ENST00000393576 2792 ntTSL 5 BASIC14.42□□□□□ -0.1
APOA1P02647 SLC22A6-203ENST00000421062 1560 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
APOA1P02647 ALDH1B1-201ENST00000377698 3066 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
APOA1P02647 REXO1L8P-201ENST00000604378 1897 ntBASIC14.42□□□□□ -0.1
APOA1P02647 IQCA1L-203ENST00000615129 2606 ntAPPRIS P1 TSL 5 BASIC14.42□□□□□ -0.1
APOA1P02647 AL031731.1-201ENST00000642131 2094 ntBASIC14.42□□□□□ -0.1
APOA1P02647 DDX59-206ENST00000447706 2900 ntTSL 2 BASIC14.42□□□□□ -0.1
APOA1P02647 ELF2-202ENST00000379549 3005 ntTSL 2 BASIC14.41□□□□□ -0.1
APOA1P02647 LY6E-203ENST00000517503 1335 ntAPPRIS ALT2 TSL 3 BASIC14.41□□□□□ -0.1
APOA1P02647 DFFA-201ENST00000377036 1403 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
APOA1P02647 MSL1-206ENST00000579565 1401 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
APOA1P02647 BCAT2-209ENST00000599246 1449 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
APOA1P02647 FBXL16-201ENST00000324361 3411 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
APOA1P02647 PRKN-202ENST00000366892 1505 ntTSL 5 BASIC14.41□□□□□ -0.1
APOA1P02647 DBNL-213ENST00000452943 1513 ntTSL 2 BASIC14.41□□□□□ -0.1
APOA1P02647 KIF19-202ENST00000389916 3643 ntAPPRIS P1 TSL 5 BASIC14.41□□□□□ -0.1
APOA1P02647 TRIM17-203ENST00000366697 2652 ntAPPRIS P1 TSL 2 BASIC14.41□□□□□ -0.1
APOA1P02647 AL512652.2-201ENST00000625156 1716 ntBASIC14.41□□□□□ -0.1
APOA1P02647 TFAP2D-201ENST00000008391 1711 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
APOA1P02647 AL355315.1-201ENST00000370649 1848 ntAPPRIS P1 TSL 2 BASIC14.41□□□□□ -0.1
APOA1P02647 SELENON-202ENST00000361547 4334 ntAPPRIS P4 TSL 1 (best) BASIC14.41□□□□□ -0.1
APOA1P02647 FAM213A-205ENST00000606162 5859 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
APOA1P02647 COL6A2-201ENST00000300527 3461 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
APOA1P02647 CENPO-202ENST00000380834 4386 ntAPPRIS P1 TSL 5 BASIC14.41□□□□□ -0.1
APOA1P02647 NEDD4L-205ENST00000400345 3647 ntAPPRIS P4 TSL 1 (best) BASIC14.41□□□□□ -0.1
APOA1P02647 BAALC-202ENST00000306391 243 ntTSL 5 BASIC14.41□□□□□ -0.1
APOA1P02647 BAALC-204ENST00000330955 222 ntTSL 5 BASIC14.41□□□□□ -0.1
APOA1P02647 MYD88-206ENST00000443433 914 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
APOA1P02647 AL359075.1-203ENST00000462729 1002 ntBASIC14.41□□□□□ -0.1
APOA1P02647 SNCB-205ENST00000510387 730 ntAPPRIS P1 TSL 2 BASIC14.41□□□□□ -0.1
APOA1P02647 OAF-202ENST00000531220 815 ntAPPRIS ALT2 TSL 3 BASIC14.41□□□□□ -0.1
APOA1P02647 CD320-202ENST00000537716 1119 ntTSL 2 BASIC14.41□□□□□ -0.1
APOA1P02647 LINC02317-201ENST00000555413 426 ntTSL 3 BASIC14.41□□□□□ -0.1
APOA1P02647 AC140504.1-202ENST00000568222 652 ntTSL 5 BASIC14.41□□□□□ -0.1
APOA1P02647 TNNT1-208ENST00000587465 1065 ntAPPRIS ALT2 TSL 5 BASIC14.41□□□□□ -0.1
APOA1P02647 AD001527.2-201ENST00000622994 785 ntBASIC14.41□□□□□ -0.1
APOA1P02647 CROCCP2-205ENST00000639481 1296 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
APOA1P02647 DTNBP1-203ENST00000355917 1359 ntTSL 5 BASIC14.41□□□□□ -0.1
APOA1P02647 CCDC74B-202ENST00000392984 1353 ntAPPRIS ALT2 TSL 5 BASIC14.41□□□□□ -0.1
APOA1P02647 ARHGEF17-201ENST00000263674 7853 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
APOA1P02647 HPS1-202ENST00000338546 1580 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
APOA1P02647 SYNPO2L-202ENST00000394810 4921 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
APOA1P02647 SEPT11-209ENST00000510515 1886 ntTSL 2 BASIC14.41□□□□□ -0.1
APOA1P02647 LUC7L3-202ENST00000393227 2284 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
APOA1P02647 CCDC110-201ENST00000307588 2898 ntAPPRIS P3 TSL 1 (best) BASIC14.41□□□□□ -0.1
APOA1P02647 ZNF365-207ENST00000410046 3379 ntTSL 2 BASIC14.41□□□□□ -0.1
APOA1P02647 FOXL1-201ENST00000320241 3655 ntAPPRIS P1 BASIC14.41□□□□□ -0.1
APOA1P02647 DPY19L2P2-201ENST00000312132 4078 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
APOA1P02647 CCNF-202ENST00000397066 4283 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
APOA1P02647 C16orf52-202ENST00000542527 4360 ntAPPRIS P1 TSL 5 BASIC14.41□□□□□ -0.1
APOA1P02647 TFAM-204ENST00000487519 5414 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
APOA1P02647 CFAP74-209ENST00000493964 5247 ntAPPRIS P5 TSL 5 BASIC14.41□□□□□ -0.1
APOA1P02647 MRC2-202ENST00000446119 3201 ntTSL 2 BASIC14.41□□□□□ -0.1
APOA1P02647 YY1AP1-211ENST00000368340 2927 ntAPPRIS ALT2 TSL 1 (best) BASIC14.41□□□□□ -0.1
APOA1P02647 LINC00926-201ENST00000501726 2530 ntTSL 2 BASIC14.41□□□□□ -0.1
Retrieved 100 of 98,524 protein–RNA pairs in 56 ms