Protein–RNA interactions for Protein: P01730

CD4, T-cell surface glycoprotein CD4, humanhuman

Predictions only

Length 458 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD4P01730 DDHD1-201ENST00000323669 5503 ntTSL 2 BASIC17.66■□□□□ 0.42
CD4P01730 NDUFA11-205ENST00000592634 2154 ntTSL 2 BASIC17.66■□□□□ 0.42
CD4P01730 CSRNP1-201ENST00000273153 3148 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
CD4P01730 CSTB-204ENST00000640406 2354 ntTSL 2 BASIC17.66■□□□□ 0.42
CD4P01730 MED17-201ENST00000251871 5142 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
CD4P01730 APOA1-204ENST00000375323 1088 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
CD4P01730 AL139158.2-202ENST00000428151 573 ntTSL 3 BASIC17.66■□□□□ 0.42
CD4P01730 AL845321.1-202ENST00000432011 786 ntTSL 5 BASIC17.66■□□□□ 0.42
CD4P01730 KCNQ1-AS1-201ENST00000440887 1084 ntTSL 5 BASIC17.66■□□□□ 0.42
CD4P01730 AC113608.2-201ENST00000448379 487 ntTSL 3 BASIC17.66■□□□□ 0.42
CD4P01730 SPDYE16-201ENST00000515340 858 ntAPPRIS ALT2 TSL 5 BASIC17.66■□□□□ 0.42
CD4P01730 AL359711.2-201ENST00000563105 872 ntBASIC17.66■□□□□ 0.42
CD4P01730 AC009065.5-201ENST00000565937 596 ntTSL 3 BASIC17.66■□□□□ 0.42
CD4P01730 PITX2-204ENST00000394595 1693 ntTSL 5 BASIC17.66■□□□□ 0.42
CD4P01730 RFC5-204ENST00000454402 1655 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
CD4P01730 LINC00847-201ENST00000501855 1871 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
CD4P01730 MAPT-205ENST00000351559 5811 ntAPPRIS ALT2 TSL 1 (best) BASIC17.66■□□□□ 0.42
CD4P01730 SLC26A5-202ENST00000339444 2474 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
CD4P01730 AL139099.2-201ENST00000555043 2469 ntTSL 2 BASIC17.66■□□□□ 0.42
CD4P01730 CDK11B-207ENST00000626918 2457 ntTSL 5 BASIC17.66■□□□□ 0.42
CD4P01730 BLOC1S5-202ENST00000397457 2684 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
CD4P01730 CACNA1I-201ENST00000401624 6740 ntAPPRIS ALT2 TSL 1 (best) BASIC17.66■□□□□ 0.42
CD4P01730 POLR3E-203ENST00000418581 2529 ntTSL 2 BASIC17.66■□□□□ 0.42
CD4P01730 CRY2-211ENST00000616080 1936 ntAPPRIS ALT2 TSL 1 (best) BASIC17.66■□□□□ 0.42
CD4P01730 CYP2R1-201ENST00000334636 2235 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
CD4P01730 SETD3-202ENST00000331768 2878 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
CD4P01730 SCARF1-205ENST00000571272 2871 ntAPPRIS ALT2 TSL 1 (best) BASIC17.65■□□□□ 0.42
CD4P01730 UBE2Q2-201ENST00000267938 3130 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
CD4P01730 GALNT14-202ENST00000349752 2733 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
CD4P01730 RUBCNL-203ENST00000378787 2731 ntTSL 2 BASIC17.65■□□□□ 0.42
CD4P01730 CIART-203ENST00000369095 1433 ntAPPRIS P3 TSL 1 (best) BASIC17.65■□□□□ 0.42
CD4P01730 KRT12-201ENST00000251643 1867 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
CD4P01730 SLC10A3-204ENST00000393587 1862 ntAPPRIS P3 TSL 2 BASIC17.65■□□□□ 0.42
CD4P01730 ESR2-209ENST00000555278 1883 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
CD4P01730 DNMT3A-205ENST00000402667 2300 ntAPPRIS ALT1 TSL 5 BASIC17.65■□□□□ 0.42
CD4P01730 TRPC1-201ENST00000273482 4324 ntAPPRIS P3 TSL 1 (best) BASIC17.65■□□□□ 0.42
CD4P01730 ATXN2-219ENST00000550104 4648 ntAPPRIS P3 TSL 1 (best) BASIC17.65■□□□□ 0.42
CD4P01730 SNAP47-213ENST00000617596 1905 ntAPPRIS ALT2 TSL 1 (best) BASIC17.65■□□□□ 0.42
CD4P01730 CDK8-201ENST00000381527 3055 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
CD4P01730 GNAS-212ENST00000371098 1719 ntTSL 5 BASIC17.65■□□□□ 0.42
CD4P01730 ACBD3-201ENST00000366812 3573 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
CD4P01730 AC005229.1-201ENST00000392885 409 ntBASIC17.65■□□□□ 0.42
CD4P01730 RPL7P3-201ENST00000441388 714 ntBASIC17.65■□□□□ 0.42
CD4P01730 METTL21A-209ENST00000448823 869 ntTSL 5 BASIC17.65■□□□□ 0.42
CD4P01730 TAF8-204ENST00000456846 1293 ntAPPRIS ALT1 TSL 1 (best) BASIC17.65■□□□□ 0.42
CD4P01730 LLPH-AS1-201ENST00000510317 623 ntTSL 4 BASIC17.65■□□□□ 0.42
CD4P01730 OIP5-AS1-209ENST00000561226 775 ntTSL 3 BASIC17.65■□□□□ 0.42
CD4P01730 AL390726.5-201ENST00000562942 871 ntTSL 2 BASIC17.65■□□□□ 0.42
CD4P01730 AC010326.2-201ENST00000602124 1020 ntAPPRIS P1 TSL 3 BASIC17.65■□□□□ 0.42
CD4P01730 WNK1-206ENST00000535572 9886 ntAPPRIS ALT2 TSL 1 (best) BASIC17.65■□□□□ 0.42
CD4P01730 CAMK2B-204ENST00000350811 2292 ntAPPRIS P4 TSL 2 BASIC17.65■□□□□ 0.42
CD4P01730 MARCO-201ENST00000327097 1838 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
CD4P01730 MEIS3-206ENST00000559524 1828 ntAPPRIS P3 TSL 2 BASIC17.65■□□□□ 0.42
CD4P01730 DHPS-201ENST00000210060 1363 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
CD4P01730 FAM172A-204ENST00000505869 1387 ntTSL 2 BASIC17.65■□□□□ 0.42
CD4P01730 AC226118.1-201ENST00000515213 2146 ntTSL 2 BASIC17.65■□□□□ 0.42
CD4P01730 RAC2-201ENST00000249071 1482 ntAPPRIS P2 TSL 1 (best) BASIC17.64■□□□□ 0.41
CD4P01730 NKAIN1-201ENST00000373736 2589 ntAPPRIS P1 TSL 2 BASIC17.64■□□□□ 0.41
CD4P01730 ZNF302-201ENST00000423823 2590 ntAPPRIS P3 TSL 1 (best) BASIC17.64■□□□□ 0.41
CD4P01730 ARHGAP27-214ENST00000532891 2604 ntAPPRIS ALT2 TSL 5 BASIC17.64■□□□□ 0.41
CD4P01730 UBALD1-205ENST00000590891 2641 ntBASIC17.64■□□□□ 0.41
CD4P01730 FRMD4A-203ENST00000357447 6821 ntAPPRIS P2 TSL 1 (best) BASIC17.64■□□□□ 0.41
CD4P01730 APOC3-202ENST00000375345 604 ntTSL 5 BASIC17.64■□□□□ 0.41
CD4P01730 AZGP1P1-201ENST00000411909 902 ntBASIC17.64■□□□□ 0.41
CD4P01730 AC074338.1-201ENST00000416825 156 ntBASIC17.64■□□□□ 0.41
CD4P01730 BCYRN1-201ENST00000418539 200 ntBASIC17.64■□□□□ 0.41
CD4P01730 AF274855.1-203ENST00000424126 800 ntTSL 3 BASIC17.64■□□□□ 0.41
CD4P01730 AL669970.3-201ENST00000435284 428 ntTSL 3 BASIC17.64■□□□□ 0.41
CD4P01730 GNB3-202ENST00000435982 1110 ntAPPRIS ALT1 TSL 1 (best) BASIC17.64■□□□□ 0.41
CD4P01730 BCRP2-202ENST00000447763 634 ntBASIC17.64■□□□□ 0.41
CD4P01730 POU5F1P6-201ENST00000466990 990 ntBASIC17.64■□□□□ 0.41
CD4P01730 SNHG12-210ENST00000483436 682 ntTSL 3 BASIC17.64■□□□□ 0.41
CD4P01730 BCRP6-201ENST00000510112 632 ntBASIC17.64■□□□□ 0.41
CD4P01730 BCRP7-201ENST00000511549 544 ntBASIC17.64■□□□□ 0.41
CD4P01730 PXN-AS1-204ENST00000542265 854 ntTSL 2 BASIC17.64■□□□□ 0.41
CD4P01730 FKBP1C-201ENST00000370659 1579 ntAPPRIS P1 BASIC17.64■□□□□ 0.41
CD4P01730 ANTXR1-201ENST00000303714 5859 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
CD4P01730 DOLPP1-202ENST00000372546 2177 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
CD4P01730 COL4A3BP-203ENST00000380494 5651 ntTSL 2 BASIC17.64■□□□□ 0.41
CD4P01730 KCNQ2-202ENST00000344462 2750 ntAPPRIS ALT2 TSL 1 (best) BASIC17.64■□□□□ 0.41
CD4P01730 C1orf43-201ENST00000350592 1610 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
CD4P01730 BET1L-203ENST00000382762 2819 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
CD4P01730 TTC13-202ENST00000366662 3112 ntAPPRIS ALT2 TSL 1 (best) BASIC17.64■□□□□ 0.41
CD4P01730 CTCFL-215ENST00000608158 1984 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
CD4P01730 MAP3K6-201ENST00000357582 4136 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
CD4P01730 KDM6B-202ENST00000448097 5422 ntAPPRIS ALT2 TSL 5 BASIC17.64■□□□□ 0.41
CD4P01730 TRIM17-205ENST00000456946 1731 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
CD4P01730 SLC27A2-201ENST00000267842 2394 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
CD4P01730 AL691432.1-201ENST00000596308 1422 ntBASIC17.64■□□□□ 0.41
CD4P01730 RHNO1-209ENST00000618250 2070 ntAPPRIS P3 TSL 4 BASIC17.63■□□□□ 0.41
CD4P01730 PHKA1-205ENST00000541944 5944 ntAPPRIS ALT1 TSL 1 (best) BASIC17.63■□□□□ 0.41
CD4P01730 DHX33-201ENST00000225296 5618 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
CD4P01730 TDRP-201ENST00000324079 3395 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
CD4P01730 TOM1L1-204ENST00000570371 2442 ntTSL 5 BASIC17.63■□□□□ 0.41
CD4P01730 SGSM2-202ENST00000426855 4734 ntAPPRIS ALT1 TSL 1 (best) BASIC17.63■□□□□ 0.41
CD4P01730 RBCK1-202ENST00000356286 2774 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
CD4P01730 CDK11B-208ENST00000629289 2490 ntTSL 5 BASIC17.63■□□□□ 0.41
CD4P01730 CDK11B-209ENST00000629312 2496 ntTSL 5 BASIC17.63■□□□□ 0.41
CD4P01730 DUSP8-202ENST00000397374 4480 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
CD4P01730 CD1E-213ENST00000444681 1820 ntAPPRIS ALT2 TSL 1 (best) BASIC17.63■□□□□ 0.41
Retrieved 100 of 98,524 protein–RNA pairs in 32.3 ms