Protein–RNA interactions for Protein: P01374

LTA, Lymphotoxin-alpha, humanhuman

Predictions only

Length 205 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LTAP01374 FAM86EP-206ENST00000510506 987 ntBASIC12.16□□□□□ -0.46
LTAP01374 AC016876.1-204ENST00000573187 679 ntTSL 3 BASIC12.16□□□□□ -0.46
LTAP01374 ANKRD29-202ENST00000585908 846 ntTSL 2 BASIC12.16□□□□□ -0.46
LTAP01374 IER2-202ENST00000587885 1291 ntAPPRIS P1 TSL 3 BASIC12.16□□□□□ -0.46
LTAP01374 AC020934.1-201ENST00000588469 739 ntTSL 3 BASIC12.16□□□□□ -0.46
LTAP01374 AC008735.1-201ENST00000592252 802 ntTSL 5 BASIC12.16□□□□□ -0.46
LTAP01374 RER1-203ENST00000378513 3000 ntTSL 3 BASIC12.16□□□□□ -0.46
LTAP01374 ILDR1-202ENST00000344209 2226 ntAPPRIS ALT2 TSL 1 (best) BASIC12.16□□□□□ -0.46
LTAP01374 BCL2L12-202ENST00000246785 1431 ntAPPRIS P3 TSL 1 (best) BASIC12.16□□□□□ -0.46
LTAP01374 ACY1-206ENST00000476351 1409 ntTSL 3 BASIC12.16□□□□□ -0.46
LTAP01374 TBC1D1-203ENST00000402522 1567 ntTSL 2 BASIC12.16□□□□□ -0.46
LTAP01374 VPS26A-201ENST00000263559 2697 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
LTAP01374 IL11RA-202ENST00000441545 1700 ntAPPRIS P1 TSL 5 BASIC12.16□□□□□ -0.46
LTAP01374 TONSL-203ENST00000613741 1713 ntTSL 5 BASIC12.16□□□□□ -0.46
LTAP01374 ADSL-220ENST00000636714 1734 ntAPPRIS ALT1 TSL 5 BASIC12.16□□□□□ -0.46
LTAP01374 PIK3CD-206ENST00000536656 5483 ntTSL 5 BASIC12.16□□□□□ -0.46
LTAP01374 PIK3CD-208ENST00000628140 5483 ntTSL 5 BASIC12.16□□□□□ -0.46
LTAP01374 CCDC40-202ENST00000374876 2010 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
LTAP01374 AL139082.1-201ENST00000613982 3433 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
LTAP01374 EIF4G1-203ENST00000350481 4990 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
LTAP01374 SLC35C2-202ENST00000317734 2175 ntTSL 2 BASIC12.16□□□□□ -0.46
LTAP01374 CYP21A2-221ENST00000418967 2182 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
LTAP01374 FERMT3-201ENST00000279227 2489 ntAPPRIS P4 TSL 1 (best) BASIC12.16□□□□□ -0.46
LTAP01374 FERMT3-202ENST00000345728 2481 ntAPPRIS ALT1 TSL 1 (best) BASIC12.16□□□□□ -0.46
LTAP01374 MED29-204ENST00000599213 2490 ntAPPRIS ALT2 TSL 1 (best) BASIC12.16□□□□□ -0.46
LTAP01374 UNKL-201ENST00000248104 4320 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
LTAP01374 YTHDC1-202ENST00000355665 3244 ntAPPRIS P3 TSL 1 (best) BASIC12.16□□□□□ -0.46
LTAP01374 BCAR1-204ENST00000418647 3387 ntAPPRIS ALT2 TSL 2 BASIC12.16□□□□□ -0.46
LTAP01374 HTD2-206ENST00000481972 1378 ntAPPRIS P1 TSL 2 BASIC12.16□□□□□ -0.46
LTAP01374 DYNC1LI2-203ENST00000443351 1502 ntTSL 2 BASIC12.16□□□□□ -0.46
LTAP01374 CNTNAP3-202ENST00000358144 4885 ntTSL 5 BASIC12.16□□□□□ -0.46
LTAP01374 GTF2H2C-201ENST00000380729 1803 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
LTAP01374 PTPN21-201ENST00000328736 6089 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
LTAP01374 NEK5-204ENST00000617045 2127 ntAPPRIS P1 TSL 2 BASIC12.16□□□□□ -0.46
LTAP01374 ELMSAN1-202ENST00000394071 7721 ntAPPRIS P2 TSL 1 (best) BASIC12.16□□□□□ -0.46
LTAP01374 SEPT9-244ENST00000592420 2588 ntTSL 2 BASIC12.16□□□□□ -0.46
LTAP01374 RNFT2-203ENST00000392549 2896 ntAPPRIS P1 TSL 5 BASIC12.16□□□□□ -0.46
LTAP01374 AC114490.1-201ENST00000417456 3163 ntTSL 2 BASIC12.16□□□□□ -0.46
LTAP01374 JPH4-205ENST00000622501 3489 ntAPPRIS ALT1 TSL 5 BASIC12.16□□□□□ -0.46
LTAP01374 ZNF84-202ENST00000392319 7020 ntAPPRIS P2 TSL 1 (best) BASIC12.15□□□□□ -0.46
LTAP01374 CERK-201ENST00000216264 4450 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
LTAP01374 KCNJ14-201ENST00000342291 2960 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
LTAP01374 STIP1-207ENST00000538945 1900 ntTSL 2 BASIC12.15□□□□□ -0.46
LTAP01374 KCNC1-201ENST00000265969 4295 ntAPPRIS P1 TSL 5 BASIC12.15□□□□□ -0.46
LTAP01374 AARSD1-202ENST00000427569 1322 ntAPPRIS P1 TSL 5 BASIC12.15□□□□□ -0.46
LTAP01374 USP43-202ENST00000570475 3500 ntAPPRIS ALT2 TSL 1 (best) BASIC12.15□□□□□ -0.46
LTAP01374 HNRNPK-204ENST00000376263 2942 ntAPPRIS P4 TSL 1 (best) BASIC12.15□□□□□ -0.46
LTAP01374 CEP63-212ENST00000513612 2903 ntAPPRIS P3 TSL 2 BASIC12.15□□□□□ -0.46
LTAP01374 DDX56-201ENST00000258772 2336 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
LTAP01374 NKIRAS1-201ENST00000388759 2335 ntAPPRIS P2 TSL 3 BASIC12.15□□□□□ -0.46
LTAP01374 GORAB-202ENST00000367763 2189 ntAPPRIS P1 TSL 2 BASIC12.15□□□□□ -0.46
LTAP01374 CHAF1A-201ENST00000301280 3339 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
LTAP01374 TRIM17-205ENST00000456946 1731 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
LTAP01374 MROH4P-201ENST00000431302 1578 ntBASIC12.15□□□□□ -0.46
LTAP01374 AC006504.4-201ENST00000592118 1568 ntBASIC12.15□□□□□ -0.46
LTAP01374 CELP-203ENST00000624767 2414 ntTSL 5 BASIC12.15□□□□□ -0.46
LTAP01374 RAB3IL1-201ENST00000301773 2125 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
LTAP01374 GRHPR-201ENST00000318158 1280 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
LTAP01374 BET1L-202ENST00000332865 533 ntTSL 5 BASIC12.15□□□□□ -0.46
LTAP01374 AL355310.2-201ENST00000369843 688 ntTSL 3 BASIC12.15□□□□□ -0.46
LTAP01374 CDKN1C-201ENST00000380725 1220 ntAPPRIS ALT2 TSL 2 BASIC12.15□□□□□ -0.46
LTAP01374 TIMM17B-202ENST00000396779 1099 ntTSL 5 BASIC12.15□□□□□ -0.46
LTAP01374 SELENOM-202ENST00000402395 1054 ntAPPRIS P2 TSL 1 (best) BASIC12.15□□□□□ -0.46
LTAP01374 ELK2BP-201ENST00000415014 1224 ntBASIC12.15□□□□□ -0.46
LTAP01374 C1orf226-202ENST00000426197 1049 ntAPPRIS P3 TSL 2 BASIC12.15□□□□□ -0.46
LTAP01374 AC093724.1-201ENST00000448659 1027 ntBASIC12.15□□□□□ -0.46
LTAP01374 AC010655.4-201ENST00000462662 707 ntTSL 4 BASIC12.15□□□□□ -0.46
LTAP01374 TMUB1-205ENST00000482202 899 ntAPPRIS P1 TSL 3 BASIC12.15□□□□□ -0.46
LTAP01374 BLOC1S6-214ENST00000567461 1052 ntTSL 2 BASIC12.15□□□□□ -0.46
LTAP01374 AC135776.2-201ENST00000567803 714 ntTSL 4 BASIC12.15□□□□□ -0.46
LTAP01374 RNF151-202ENST00000569210 853 ntTSL 2 BASIC12.15□□□□□ -0.46
LTAP01374 MIR3180-1-201ENST00000580374 94 ntBASIC12.15□□□□□ -0.46
LTAP01374 AC129926.1-201ENST00000581944 614 ntTSL 2 BASIC12.15□□□□□ -0.46
LTAP01374 MIR3180-3-201ENST00000584616 94 ntBASIC12.15□□□□□ -0.46
LTAP01374 MTDHP4-201ENST00000600287 670 ntBASIC12.15□□□□□ -0.46
LTAP01374 IGHV3OR16-7-201ENST00000604106 360 ntBASIC12.15□□□□□ -0.46
LTAP01374 AC091076.1-201ENST00000610741 619 ntBASIC12.15□□□□□ -0.46
LTAP01374 CPSF7-202ENST00000394888 3650 ntAPPRIS P4 TSL 2 BASIC12.15□□□□□ -0.46
LTAP01374 TRIM45-201ENST00000256649 3515 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
LTAP01374 FYN-205ENST00000368682 3234 ntAPPRIS ALT1 TSL 5 BASIC12.15□□□□□ -0.46
LTAP01374 MEGF10-206ENST00000508365 2365 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
LTAP01374 AC126365.1-201ENST00000578585 1514 ntBASIC12.15□□□□□ -0.46
LTAP01374 TTC22-202ENST00000371276 3345 ntAPPRIS P1 TSL 5 BASIC12.15□□□□□ -0.46
LTAP01374 C4orf19-201ENST00000284437 1949 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
LTAP01374 KRT8P44-201ENST00000441609 1350 ntBASIC12.15□□□□□ -0.46
LTAP01374 IRF8-203ENST00000563180 1394 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
LTAP01374 GPR61-206ENST00000616874 2459 ntAPPRIS P1 TSL 2 BASIC12.15□□□□□ -0.46
LTAP01374 KAT7-210ENST00000509773 1774 ntTSL 2 BASIC12.15□□□□□ -0.46
LTAP01374 STIP1-201ENST00000305218 2196 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.47
LTAP01374 EXOC6B-209ENST00000634650 2583 ntTSL 5 BASIC12.15□□□□□ -0.47
LTAP01374 NIN-203ENST00000382041 6496 ntTSL 1 (best) BASIC12.15□□□□□ -0.47
LTAP01374 SOGA3-201ENST00000465909 3756 ntTSL 5 BASIC12.15□□□□□ -0.47
LTAP01374 PLEKHN1-203ENST00000379410 2404 ntAPPRIS P3 TSL 1 (best) BASIC12.15□□□□□ -0.47
LTAP01374 TSPAN14-210ENST00000616406 2436 ntTSL 2 BASIC12.15□□□□□ -0.47
LTAP01374 MBD1-205ENST00000353909 2820 ntTSL 1 (best) BASIC12.15□□□□□ -0.47
LTAP01374 CYP51A1P2-201ENST00000419457 1499 ntBASIC12.14□□□□□ -0.47
LTAP01374 USH1C-207ENST00000527720 2278 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
LTAP01374 WDR20-202ENST00000322340 3060 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
LTAP01374 FECH-202ENST00000382873 2526 ntAPPRIS ALT2 TSL 2 BASIC12.14□□□□□ -0.47
LTAP01374 LINC00926-201ENST00000501726 2530 ntTSL 2 BASIC12.14□□□□□ -0.47
Retrieved 100 of 98,524 protein–RNA pairs in 51.8 ms