Protein–RNA interactions for Protein: O95292

VAPB, Vesicle-associated membrane protein-associated protein B/C, humanhuman

Predictions only

Length 243 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VAPBO95292 GPRIN1-201ENST00000303991 4211 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
VAPBO95292 NTRK3-202ENST00000355254 2938 ntAPPRIS ALT2 TSL 5 BASIC16.2■□□□□ 0.18
VAPBO95292 NFAM1-201ENST00000329021 5602 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
VAPBO95292 SLC43A1-204ENST00000528450 2358 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
VAPBO95292 DIDO1-207ENST00000395343 8477 ntAPPRIS ALT2 TSL 1 (best) BASIC16.2■□□□□ 0.18
VAPBO95292 CGREF1-201ENST00000260595 1177 ntAPPRIS ALT2 TSL 5 BASIC16.2■□□□□ 0.18
VAPBO95292 PAXX-201ENST00000371620 812 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
VAPBO95292 CLIC1-208ENST00000375784 1254 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
VAPBO95292 AL049569.1-201ENST00000446261 636 ntTSL 3 BASIC16.2■□□□□ 0.18
VAPBO95292 ZNF655-216ENST00000449244 544 ntTSL 4 BASIC16.2■□□□□ 0.18
VAPBO95292 AP001471.1-201ENST00000454245 672 ntTSL 3 BASIC16.2■□□□□ 0.18
VAPBO95292 OR10S1-201ENST00000531945 1121 ntAPPRIS P2 BASIC16.2■□□□□ 0.18
VAPBO95292 AC243562.1-201ENST00000560672 389 ntBASIC16.2■□□□□ 0.18
VAPBO95292 SNHG15-206ENST00000580528 1073 ntTSL 2 BASIC16.2■□□□□ 0.18
VAPBO95292 AP000894.3-201ENST00000582554 351 ntTSL 5 BASIC16.2■□□□□ 0.18
VAPBO95292 CKMT1B-215ENST00000627381 1074 ntTSL 5 BASIC16.2■□□□□ 0.18
VAPBO95292 OR10S1-202ENST00000641123 1121 ntAPPRIS ALT2 BASIC16.2■□□□□ 0.18
VAPBO95292 CPEB2-201ENST00000259997 5612 ntAPPRIS ALT2 TSL 5 BASIC16.2■□□□□ 0.18
VAPBO95292 ATP2A3-206ENST00000397043 3197 ntAPPRIS ALT1 TSL 1 (best) BASIC16.2■□□□□ 0.18
VAPBO95292 KLK5-203ENST00000593428 1365 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
VAPBO95292 TSSC2-204ENST00000529482 2337 ntTSL 2 BASIC16.2■□□□□ 0.18
VAPBO95292 MRPS21-201ENST00000581066 1462 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
VAPBO95292 SUN2-203ENST00000406622 2725 ntAPPRIS P1 TSL 2 BASIC16.2■□□□□ 0.18
VAPBO95292 Z98749.3-201ENST00000400206 1770 ntAPPRIS P1 TSL 2 BASIC16.2■□□□□ 0.18
VAPBO95292 CANX-201ENST00000247461 4260 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
VAPBO95292 CYP4F3-202ENST00000585846 2056 ntAPPRIS ALT1 TSL 1 (best) BASIC16.2■□□□□ 0.18
VAPBO95292 PITPNM2-AS1-201ENST00000506255 2191 ntTSL 2 BASIC16.2■□□□□ 0.18
VAPBO95292 LUC7L3-202ENST00000393227 2284 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
VAPBO95292 STK40-202ENST00000373129 3846 ntAPPRIS P3 TSL 1 (best) BASIC16.2■□□□□ 0.18
VAPBO95292 ELP5-201ENST00000354429 1304 ntAPPRIS P2 TSL 5 BASIC16.19■□□□□ 0.18
VAPBO95292 TMEM53-203ENST00000372242 1846 ntTSL 3 BASIC16.19■□□□□ 0.18
VAPBO95292 DLX4-201ENST00000240306 2034 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
VAPBO95292 FAM151A-201ENST00000302250 2005 ntAPPRIS P2 TSL 1 (best) BASIC16.19■□□□□ 0.18
VAPBO95292 MIR137HG-202ENST00000424528 2639 ntTSL 2 BASIC16.19■□□□□ 0.18
VAPBO95292 MGAT4B-202ENST00000337755 3027 ntTSL 2 BASIC16.19■□□□□ 0.18
VAPBO95292 SHTN1-201ENST00000260777 5308 ntAPPRIS ALT2 TSL 2 BASIC16.19■□□□□ 0.18
VAPBO95292 COLGALT2-201ENST00000361927 5177 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
VAPBO95292 C16orf58-201ENST00000327237 2793 ntAPPRIS P2 TSL 1 (best) BASIC16.19■□□□□ 0.18
VAPBO95292 ITGB2-207ENST00000397854 2592 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
VAPBO95292 AC134407.2-201ENST00000625089 1978 ntBASIC16.19■□□□□ 0.18
VAPBO95292 WDR45-202ENST00000356463 1688 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
VAPBO95292 ALDH2-202ENST00000416293 1572 ntTSL 2 BASIC16.19■□□□□ 0.18
VAPBO95292 RAB7A-203ENST00000482525 1589 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
VAPBO95292 BORCS8-203ENST00000477565 1489 ntAPPRIS ALT1 TSL 1 (best) BASIC16.19■□□□□ 0.18
VAPBO95292 SYCE1-203ENST00000368517 1377 ntAPPRIS P3 TSL 5 BASIC16.19■□□□□ 0.18
VAPBO95292 NKG7-201ENST00000221978 843 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
VAPBO95292 CCDC12-201ENST00000292314 1017 ntTSL 5 BASIC16.19■□□□□ 0.18
VAPBO95292 BAX-203ENST00000354470 433 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
VAPBO95292 MOB1B-202ENST00000396051 1107 ntTSL 2 BASIC16.19■□□□□ 0.18
VAPBO95292 ADH5P3-201ENST00000433842 1137 ntBASIC16.19■□□□□ 0.18
VAPBO95292 AC097532.1-201ENST00000440802 322 ntTSL 2 BASIC16.19■□□□□ 0.18
VAPBO95292 RN7SL589P-201ENST00000481268 310 ntBASIC16.19■□□□□ 0.18
VAPBO95292 AL138781.1-202ENST00000563018 775 ntTSL 3 BASIC16.19■□□□□ 0.18
VAPBO95292 ABHD17A-204ENST00000590661 1079 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
VAPBO95292 NKG7-205ENST00000600427 520 ntTSL 3 BASIC16.19■□□□□ 0.18
VAPBO95292 HNRNPDL-206ENST00000602300 1291 ntAPPRIS ALT2 TSL 1 (best) BASIC16.19■□□□□ 0.18
VAPBO95292 CERK-201ENST00000216264 4450 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
VAPBO95292 DAAM2-211ENST00000633794 3871 ntTSL 5 BASIC16.19■□□□□ 0.18
VAPBO95292 CACNA2D2-203ENST00000423994 5329 ntAPPRIS ALT2 TSL 5 BASIC16.19■□□□□ 0.18
VAPBO95292 SRCIN1-215ENST00000621492 4644 ntAPPRIS ALT2 TSL 5 BASIC16.19■□□□□ 0.18
VAPBO95292 HSPA12B-201ENST00000254963 3151 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
VAPBO95292 KLHL42-201ENST00000381271 6703 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
VAPBO95292 GMPPA-202ENST00000341142 1524 ntAPPRIS P1 TSL 5 BASIC16.19■□□□□ 0.18
VAPBO95292 YARS-201ENST00000373477 3238 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
VAPBO95292 SSFA2-202ENST00000409001 4987 ntAPPRIS ALT2 TSL 1 (best) BASIC16.18■□□□□ 0.18
VAPBO95292 GTPBP8-202ENST00000383677 1787 ntTSL 3 BASIC16.18■□□□□ 0.18
VAPBO95292 AC019205.2-202ENST00000441363 2403 ntTSL 5 BASIC16.18■□□□□ 0.18
VAPBO95292 C12orf40-202ENST00000405531 1656 ntAPPRIS ALT2 TSL 1 (best) BASIC16.18■□□□□ 0.18
VAPBO95292 CACFD1-206ENST00000540581 2880 ntAPPRIS ALT2 TSL 2 BASIC16.18■□□□□ 0.18
VAPBO95292 AC126177.1-201ENST00000547829 2218 ntBASIC16.18■□□□□ 0.18
VAPBO95292 COLEC11-209ENST00000418971 1595 ntTSL 2 BASIC16.18■□□□□ 0.18
VAPBO95292 HSPB7-204ENST00000411503 2128 ntAPPRIS ALT1 TSL 1 (best) BASIC16.18■□□□□ 0.18
VAPBO95292 ADAM15-208ENST00000447332 2146 ntAPPRIS ALT2 TSL 2 BASIC16.18■□□□□ 0.18
VAPBO95292 ATP6V0E2-212ENST00000611515 2565 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
VAPBO95292 PCDHGB2-202ENST00000622527 2588 ntAPPRIS P1 BASIC16.18■□□□□ 0.18
VAPBO95292 C6orf223-201ENST00000336600 3581 ntAPPRIS P2 TSL 1 (best) BASIC16.18■□□□□ 0.18
VAPBO95292 WDR45-206ENST00000376368 1381 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
VAPBO95292 EIF5A-206ENST00000571955 1366 ntAPPRIS P1 TSL 5 BASIC16.18■□□□□ 0.18
VAPBO95292 FCN3-201ENST00000270879 1030 ntAPPRIS P4 TSL 1 (best) BASIC16.18■□□□□ 0.18
VAPBO95292 FCN3-202ENST00000354982 997 ntAPPRIS ALT2 TSL 1 (best) BASIC16.18■□□□□ 0.18
VAPBO95292 ATP5G3-202ENST00000392541 842 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
VAPBO95292 NDUFA4L2-201ENST00000393825 1186 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
VAPBO95292 YBX2P1-201ENST00000394192 760 ntBASIC16.18■□□□□ 0.18
VAPBO95292 PMP22-202ENST00000395936 816 ntTSL 3 BASIC16.18■□□□□ 0.18
VAPBO95292 LINC00029-202ENST00000414668 1117 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
VAPBO95292 AC004832.2-201ENST00000426397 482 ntBASIC16.18■□□□□ 0.18
VAPBO95292 FAM41C-202ENST00000432963 504 ntTSL 2 BASIC16.18■□□□□ 0.18
VAPBO95292 AL732437.1-201ENST00000442008 595 ntTSL 4 BASIC16.18■□□□□ 0.18
VAPBO95292 SPDYE11-202ENST00000450699 704 ntBASIC16.18■□□□□ 0.18
VAPBO95292 TMEM176A-202ENST00000461345 635 ntAPPRIS ALT2 TSL 5 BASIC16.18■□□□□ 0.18
VAPBO95292 TMUB1-204ENST00000476627 882 ntAPPRIS P1 TSL 3 BASIC16.18■□□□□ 0.18
VAPBO95292 AC009567.1-201ENST00000515071 525 ntTSL 4 BASIC16.18■□□□□ 0.18
VAPBO95292 KRT8P48-201ENST00000515599 1220 ntBASIC16.18■□□□□ 0.18
VAPBO95292 HELT-204ENST00000515777 841 ntAPPRIS P4 TSL 1 (best) BASIC16.18■□□□□ 0.18
VAPBO95292 SPCS2-202ENST00000526361 772 ntTSL 2 BASIC16.18■□□□□ 0.18
VAPBO95292 AC131009.1-201ENST00000539078 426 ntTSL 5 BASIC16.18■□□□□ 0.18
VAPBO95292 KIRREL3-AS1-201ENST00000548204 586 ntTSL 3 BASIC16.18■□□□□ 0.18
VAPBO95292 AC009053.3-201ENST00000567148 574 ntTSL 4 BASIC16.18■□□□□ 0.18
VAPBO95292 SPDYE9P-201ENST00000570642 692 ntBASIC16.18■□□□□ 0.18
VAPBO95292 AC024592.3-202ENST00000586349 506 ntTSL 2 BASIC16.18■□□□□ 0.18
Retrieved 100 of 98,524 protein–RNA pairs in 75.1 ms