Protein–RNA interactions for Protein: O76075

DFFB, DNA fragmentation factor subunit beta, humanhuman

Predictions only

Length 338 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DFFBO76075 RNF32-204ENST00000392743 1746 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
DFFBO76075 TSNARE1-205ENST00000520166 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC13.19□□□□□ -0.3
DFFBO76075 PEX13-204ENST00000444100 1533 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
DFFBO76075 C11orf68-203ENST00000530188 1528 ntAPPRIS ALT2 BASIC13.19□□□□□ -0.3
DFFBO76075 LUC7L3-202ENST00000393227 2284 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
DFFBO76075 LINC01101-201ENST00000622953 1884 ntBASIC13.19□□□□□ -0.3
DFFBO76075 PTPRA-201ENST00000216877 3725 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
DFFBO76075 TPM1-201ENST00000267996 1670 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
DFFBO76075 TPM1-219ENST00000559397 1655 ntTSL 2 BASIC13.19□□□□□ -0.3
DFFBO76075 WDR4-201ENST00000330317 1471 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
DFFBO76075 ARHGAP8-201ENST00000336963 1487 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
DFFBO76075 SH2B1-206ENST00000545570 1488 ntTSL 2 BASIC13.19□□□□□ -0.3
DFFBO76075 AFAP1-201ENST00000358461 7516 ntAPPRIS P3 TSL 2 BASIC13.19□□□□□ -0.3
DFFBO76075 PSCA-201ENST00000301258 1020 ntAPPRIS P2 TSL 1 (best) BASIC13.19□□□□□ -0.3
DFFBO76075 TMEM213-202ENST00000413208 480 ntAPPRIS ALT2 TSL 3 BASIC13.19□□□□□ -0.3
DFFBO76075 WDR53-204ENST00000433160 887 ntTSL 5 BASIC13.19□□□□□ -0.3
DFFBO76075 DYNC1LI2-202ENST00000440564 1145 ntTSL 2 BASIC13.19□□□□□ -0.3
DFFBO76075 KRT16P4-201ENST00000453883 522 ntBASIC13.19□□□□□ -0.3
DFFBO76075 S100A2-206ENST00000497140 697 ntTSL 2 BASIC13.19□□□□□ -0.3
DFFBO76075 EFCAB11-211ENST00000556609 568 ntTSL 3 BASIC13.19□□□□□ -0.3
DFFBO76075 GZMM-202ENST00000592501 941 ntTSL 3 BASIC13.19□□□□□ -0.3
DFFBO76075 MUC1-224ENST00000611577 1023 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
DFFBO76075 AC020765.3-201ENST00000613051 740 ntBASIC13.19□□□□□ -0.3
DFFBO76075 AC005632.4-201ENST00000613759 431 ntTSL 3 BASIC13.19□□□□□ -0.3
DFFBO76075 AL117335.1-203ENST00000619200 948 ntTSL 5 BASIC13.19□□□□□ -0.3
DFFBO76075 RNF11-201ENST00000242719 3084 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
DFFBO76075 EXOC6B-202ENST00000410104 5795 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
DFFBO76075 COCH-202ENST00000396618 2536 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
DFFBO76075 TDRP-205ENST00000613071 3421 ntAPPRIS P1 TSL 3 BASIC13.19□□□□□ -0.3
DFFBO76075 DENND4C-209ENST00000602925 6831 ntAPPRIS P1 TSL 5 BASIC13.19□□□□□ -0.3
DFFBO76075 LFNG-202ENST00000338732 1968 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
DFFBO76075 PRICKLE1-201ENST00000345127 5902 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
DFFBO76075 CLEC18C-203ENST00000541793 1955 ntAPPRIS P2 TSL 1 (best) BASIC13.19□□□□□ -0.3
DFFBO76075 CLEC18C-210ENST00000569347 1970 ntAPPRIS P2 TSL 1 (best) BASIC13.19□□□□□ -0.3
DFFBO76075 MAP2K3-202ENST00000342679 2303 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
DFFBO76075 SPHK2-210ENST00000599748 2683 ntAPPRIS ALT2 TSL 1 (best) BASIC13.19□□□□□ -0.3
DFFBO76075 FBXO42-201ENST00000375592 6202 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
DFFBO76075 MSMO1-202ENST00000393766 1789 ntTSL 2 BASIC13.19□□□□□ -0.3
DFFBO76075 ST6GAL2-204ENST00000409382 7275 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
DFFBO76075 SLC4A3-202ENST00000317151 4069 ntAPPRIS P1 TSL 5 BASIC13.19□□□□□ -0.3
DFFBO76075 PSEN2-203ENST00000422240 1947 ntAPPRIS ALT1 TSL 2 BASIC13.19□□□□□ -0.3
DFFBO76075 SCAP-215ENST00000545718 2950 ntTSL 5 BASIC13.19□□□□□ -0.3
DFFBO76075 BAIAP3-216ENST00000628027 4732 ntTSL 5 BASIC13.19□□□□□ -0.3
DFFBO76075 TRPM2-204ENST00000397932 5216 ntAPPRIS ALT2 TSL 1 (best) BASIC13.19□□□□□ -0.3
DFFBO76075 SNX18-202ENST00000343017 3140 ntBASIC13.19□□□□□ -0.3
DFFBO76075 KCNMA1-262ENST00000639489 4302 ntAPPRIS ALT2 TSL 5 BASIC13.19□□□□□ -0.3
DFFBO76075 FERMT1-201ENST00000217289 5151 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
DFFBO76075 MMADHC-203ENST00000428879 1726 ntAPPRIS P1 TSL 2 BASIC13.19□□□□□ -0.3
DFFBO76075 SLC24A3-201ENST00000328041 3929 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
DFFBO76075 DPP6-205ENST00000427557 2388 ntTSL 2 BASIC13.18□□□□□ -0.3
DFFBO76075 TRIB3-202ENST00000422053 1533 ntAPPRIS ALT2 TSL 2 BASIC13.18□□□□□ -0.3
DFFBO76075 AP000866.1-201ENST00000499143 2886 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
DFFBO76075 ZNF514-201ENST00000295208 3011 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
DFFBO76075 HYAL3-207ENST00000621157 1696 ntAPPRIS P1 TSL 5 BASIC13.18□□□□□ -0.3
DFFBO76075 DNAJC2-203ENST00000379263 2167 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
DFFBO76075 STRN3-201ENST00000355683 3970 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
DFFBO76075 CSPG4P12-202ENST00000559989 7790 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
DFFBO76075 DCUN1D4-203ENST00000451288 4269 ntTSL 2 BASIC13.18□□□□□ -0.3
DFFBO76075 WBP4-201ENST00000379487 2623 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
DFFBO76075 LONP1-213ENST00000590729 2626 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
DFFBO76075 ZNF135-202ENST00000359978 2120 ntTSL 2 BASIC13.18□□□□□ -0.3
DFFBO76075 XXYLT1-205ENST00000437101 2149 ntTSL 2 BASIC13.18□□□□□ -0.3
DFFBO76075 KIF7-201ENST00000394412 4551 ntAPPRIS P1 TSL 5 BASIC13.18□□□□□ -0.3
DFFBO76075 ATP6V0A1-204ENST00000537728 2774 ntTSL 2 BASIC13.18□□□□□ -0.3
DFFBO76075 RGN-203ENST00000397180 2257 ntAPPRIS P1 TSL 5 BASIC13.18□□□□□ -0.3
DFFBO76075 ST7L-202ENST00000358039 4528 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
DFFBO76075 GPRASP1-205ENST00000537097 5980 ntAPPRIS P1 TSL 2 BASIC13.18□□□□□ -0.3
DFFBO76075 VSIR-201ENST00000394957 4689 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
DFFBO76075 SEMA4C-201ENST00000305476 3545 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
DFFBO76075 CRK-202ENST00000398970 3675 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
DFFBO76075 SLC25A32-201ENST00000297578 2891 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
DFFBO76075 QRFP-201ENST00000343079 411 ntAPPRIS P1 BASIC13.18□□□□□ -0.3
DFFBO76075 EDN3-203ENST00000371025 1153 ntAPPRIS ALT2 TSL 1 (best) BASIC13.18□□□□□ -0.3
DFFBO76075 NAT6-202ENST00000417393 1163 ntAPPRIS ALT2 TSL 1 (best) BASIC13.18□□□□□ -0.3
DFFBO76075 AL645608.6-201ENST00000418300 402 ntTSL 3 BASIC13.18□□□□□ -0.3
DFFBO76075 LINC00982-205ENST00000420957 435 ntBASIC13.18□□□□□ -0.3
DFFBO76075 NMU-205ENST00000511469 756 ntTSL 3 BASIC13.18□□□□□ -0.3
DFFBO76075 RAP1B-229ENST00000543393 874 ntTSL 3 BASIC13.18□□□□□ -0.3
DFFBO76075 MPDU1-223ENST00000582151 728 ntBASIC13.18□□□□□ -0.3
DFFBO76075 LCE1C-202ENST00000607093 644 ntAPPRIS P2 BASIC13.18□□□□□ -0.3
DFFBO76075 AL121772.3-201ENST00000610840 674 ntBASIC13.18□□□□□ -0.3
DFFBO76075 AL732314.6-201ENST00000627721 484 ntTSL 4 BASIC13.18□□□□□ -0.3
DFFBO76075 COL17A1-201ENST00000353479 5734 ntAPPRIS P2 TSL 1 (best) BASIC13.18□□□□□ -0.3
DFFBO76075 GRIN2C-201ENST00000293190 4261 ntAPPRIS P3 TSL 1 (best) BASIC13.18□□□□□ -0.3
DFFBO76075 PDK2-201ENST00000007708 2384 ntTSL 2 BASIC13.18□□□□□ -0.3
DFFBO76075 PCK2-203ENST00000545054 2505 ntTSL 2 BASIC13.18□□□□□ -0.3
DFFBO76075 PMPCAP1-201ENST00000508114 1576 ntBASIC13.18□□□□□ -0.3
DFFBO76075 ALG1-204ENST00000588623 2671 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
DFFBO76075 ARPC1B-211ENST00000451682 1715 ntAPPRIS P1 TSL 5 BASIC13.18□□□□□ -0.3
DFFBO76075 YTHDF3-205ENST00000539294 5163 ntAPPRIS P2 TSL 1 (best) BASIC13.18□□□□□ -0.3
DFFBO76075 SAE1-202ENST00000392776 1851 ntTSL 3 BASIC13.18□□□□□ -0.3
DFFBO76075 KNSTRN-202ENST00000416151 1899 ntTSL 3 BASIC13.18□□□□□ -0.3
DFFBO76075 TNFSF13-202ENST00000349228 2036 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
DFFBO76075 FLAD1-201ENST00000292180 2160 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
DFFBO76075 TNIK-204ENST00000436636 6970 ntAPPRIS P3 TSL 1 (best) BASIC13.18□□□□□ -0.3
DFFBO76075 AC009053.1-201ENST00000566802 2320 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
DFFBO76075 RSPH6A-202ENST00000597055 2306 ntAPPRIS ALT2 TSL 1 (best) BASIC13.18□□□□□ -0.3
DFFBO76075 RASA4B-207ENST00000541662 2794 ntAPPRIS P2 TSL 2 BASIC13.18□□□□□ -0.3
DFFBO76075 LRRN1-201ENST00000319331 3823 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
DFFBO76075 AMZ2-203ENST00000392720 1378 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Retrieved 100 of 98,524 protein–RNA pairs in 45.6 ms