Protein–RNA interactions for Protein: O75677

RFPL1, Ret finger protein-like 1, humanhuman

Predictions only

Length 317 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFPL1O75677 SPAG6-201ENST00000313311 2421 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
RFPL1O75677 TPBG-202ENST00000535040 3392 ntAPPRIS P1 TSL 2 BASIC16.17■□□□□ 0.18
RFPL1O75677 SYT5-207ENST00000590851 3619 ntTSL 2 BASIC16.17■□□□□ 0.18
RFPL1O75677 LINC01565-201ENST00000356020 2697 ntTSL 2 BASIC16.17■□□□□ 0.18
RFPL1O75677 AC138904.3-201ENST00000635780 2681 ntTSL 5 BASIC16.17■□□□□ 0.18
RFPL1O75677 GATA4-201ENST00000335135 3414 ntAPPRIS P3 TSL 5 BASIC16.17■□□□□ 0.18
RFPL1O75677 AC099063.4-201ENST00000641099 1602 ntBASIC16.17■□□□□ 0.18
RFPL1O75677 C6orf99-202ENST00000367073 769 ntTSL 5 BASIC16.17■□□□□ 0.18
RFPL1O75677 AP1S3-203ENST00000396654 830 ntAPPRIS P2 TSL 2 BASIC16.17■□□□□ 0.18
RFPL1O75677 THAP7-202ENST00000399133 1144 ntAPPRIS P1 TSL 2 BASIC16.17■□□□□ 0.18
RFPL1O75677 FAM19A5-204ENST00000406880 833 ntTSL 3 BASIC16.17■□□□□ 0.18
RFPL1O75677 FTCD-AS1-201ENST00000446649 500 ntTSL 2 BASIC16.17■□□□□ 0.18
RFPL1O75677 AC119403.1-201ENST00000520090 776 ntTSL 5 BASIC16.17■□□□□ 0.18
RFPL1O75677 SNHG6-201ENST00000520348 648 ntTSL 2 BASIC16.17■□□□□ 0.18
RFPL1O75677 CCND1-203ENST00000536559 553 ntTSL 3 BASIC16.17■□□□□ 0.18
RFPL1O75677 AL359317.2-203ENST00000557409 538 ntTSL 4 BASIC16.17■□□□□ 0.18
RFPL1O75677 ORC5-208ENST00000626700 344 ntTSL 3 BASIC16.17■□□□□ 0.18
RFPL1O75677 LLGL2-201ENST00000167462 3480 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
RFPL1O75677 NQO2-201ENST00000338130 1515 ntAPPRIS P1 TSL 2 BASIC16.17■□□□□ 0.18
RFPL1O75677 BUD13-202ENST00000375445 1793 ntAPPRIS ALT2 TSL 1 (best) BASIC16.17■□□□□ 0.18
RFPL1O75677 AP1M2-207ENST00000590923 1757 ntAPPRIS ALT1 TSL 1 (best) BASIC16.17■□□□□ 0.18
RFPL1O75677 ZNF208-205ENST00000601773 2027 ntTSL 2 BASIC16.17■□□□□ 0.18
RFPL1O75677 PDE4C-202ENST00000355502 5979 ntAPPRIS P3 TSL 2 BASIC16.17■□□□□ 0.18
RFPL1O75677 KHDRBS1-202ENST00000327300 2757 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
RFPL1O75677 FAM83A-202ENST00000518448 5393 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
RFPL1O75677 C5orf24-204ENST00000504727 2923 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
RFPL1O75677 POM121C-206ENST00000607367 3690 ntAPPRIS ALT2 TSL 5 BASIC16.17■□□□□ 0.18
RFPL1O75677 MAP3K8-201ENST00000263056 3096 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
RFPL1O75677 TEX264-202ENST00000395057 1555 ntAPPRIS P3 TSL 1 (best) BASIC16.17■□□□□ 0.18
RFPL1O75677 FAM131A-207ENST00000450976 1335 ntTSL 3 BASIC16.17■□□□□ 0.18
RFPL1O75677 PHACTR3-204ENST00000371015 2728 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
RFPL1O75677 COX11-201ENST00000299335 2497 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
RFPL1O75677 TRIM33-201ENST00000358465 8339 ntAPPRIS P4 TSL 1 (best) BASIC16.17■□□□□ 0.18
RFPL1O75677 STAT3-201ENST00000264657 5047 ntAPPRIS P4 TSL 1 (best) BASIC16.17■□□□□ 0.18
RFPL1O75677 SLC18A1-207ENST00000519026 1980 ntTSL 5 BASIC16.17■□□□□ 0.18
RFPL1O75677 USP27X-201ENST00000621775 2618 ntAPPRIS P1 BASIC16.16■□□□□ 0.18
RFPL1O75677 KCNQ2-204ENST00000359125 3253 ntAPPRIS P4 TSL 1 (best) BASIC16.16■□□□□ 0.18
RFPL1O75677 FBXO45-202ENST00000440469 3689 ntTSL 2 BASIC16.16■□□□□ 0.18
RFPL1O75677 MCF2L2-208ENST00000473233 4748 ntAPPRIS ALT2 TSL 5 BASIC16.16■□□□□ 0.18
RFPL1O75677 RIF1-204ENST00000430328 7992 ntAPPRIS ALT2 TSL 1 (best) BASIC16.16■□□□□ 0.18
RFPL1O75677 AC009802.1-201ENST00000637973 1609 ntTSL 5 BASIC16.16■□□□□ 0.18
RFPL1O75677 KL-201ENST00000380099 5006 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
RFPL1O75677 PLIN1-201ENST00000300055 2953 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
RFPL1O75677 RNF25-201ENST00000295704 1914 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
RFPL1O75677 DTNB-228ENST00000496972 2328 ntTSL 2 BASIC16.16■□□□□ 0.18
RFPL1O75677 TSPAN3-201ENST00000267970 6467 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
RFPL1O75677 TERF1-201ENST00000276602 3268 ntAPPRIS ALT2 TSL 1 (best) BASIC16.16■□□□□ 0.18
RFPL1O75677 C11orf24-201ENST00000304271 2063 ntAPPRIS P3 TSL 1 (best) BASIC16.16■□□□□ 0.18
RFPL1O75677 OASL-204ENST00000620239 1695 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
RFPL1O75677 HMGN4-201ENST00000377575 1225 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
RFPL1O75677 METTL21A-202ENST00000406927 1103 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
RFPL1O75677 AL354836.1-201ENST00000414042 681 ntTSL 2 BASIC16.16■□□□□ 0.18
RFPL1O75677 MIPEPP3-202ENST00000424756 347 ntTSL 3 BASIC16.16■□□□□ 0.18
RFPL1O75677 AL049612.1-201ENST00000427017 694 ntTSL 5 BASIC16.16■□□□□ 0.18
RFPL1O75677 LINC01786-201ENST00000434139 268 ntTSL 5 BASIC16.16■□□□□ 0.18
RFPL1O75677 AKIRIN1-203ENST00000446189 1243 ntTSL 2 BASIC16.16■□□□□ 0.18
RFPL1O75677 SWI5-205ENST00000495313 466 ntAPPRIS ALT2 TSL 3 BASIC16.16■□□□□ 0.18
RFPL1O75677 SLC30A5-203ENST00000502979 681 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
RFPL1O75677 SMN2-210ENST00000511812 867 ntTSL 2 BASIC16.16■□□□□ 0.18
RFPL1O75677 POLD4-207ENST00000531239 584 ntTSL 2 BASIC16.16■□□□□ 0.18
RFPL1O75677 AC069503.2-201ENST00000546333 576 ntAPPRIS P1 TSL 5 BASIC16.16■□□□□ 0.18
RFPL1O75677 AC092115.3-201ENST00000575838 592 ntTSL 5 BASIC16.16■□□□□ 0.18
RFPL1O75677 AC068594.1-203ENST00000581153 695 ntTSL 2 BASIC16.16■□□□□ 0.18
RFPL1O75677 AC011476.2-201ENST00000585492 1271 ntTSL 2 BASIC16.16■□□□□ 0.18
RFPL1O75677 AC138035.3-201ENST00000622706 2791 ntBASIC16.16■□□□□ 0.18
RFPL1O75677 LAT2-202ENST00000344995 2363 ntAPPRIS P2 TSL 1 (best) BASIC16.16■□□□□ 0.18
RFPL1O75677 SPSB1-202ENST00000357898 1439 ntAPPRIS P1 TSL 5 BASIC16.16■□□□□ 0.18
RFPL1O75677 TMEM120A-201ENST00000417509 1444 ntTSL 2 BASIC16.16■□□□□ 0.18
RFPL1O75677 YY1AP1-211ENST00000368340 2927 ntAPPRIS ALT2 TSL 1 (best) BASIC16.16■□□□□ 0.18
RFPL1O75677 GDF2-201ENST00000581492 1955 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
RFPL1O75677 DEGS1-201ENST00000323699 2101 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
RFPL1O75677 PDE8B-204ENST00000342343 2677 ntAPPRIS ALT2 TSL 1 (best) BASIC16.16■□□□□ 0.18
RFPL1O75677 SEMA4C-201ENST00000305476 3545 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
RFPL1O75677 TNFRSF14-AS1-201ENST00000416860 3522 ntTSL 2 BASIC16.16■□□□□ 0.18
RFPL1O75677 INPP5K-204ENST00000421807 2988 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
RFPL1O75677 B3GAT1-201ENST00000312527 3652 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
RFPL1O75677 CRK-202ENST00000398970 3675 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
RFPL1O75677 ADAMTS13-206ENST00000371929 4934 ntAPPRIS P4 TSL 1 (best) BASIC16.16■□□□□ 0.18
RFPL1O75677 FAM46A-201ENST00000320172 5609 ntAPPRIS P2 TSL 1 (best) BASIC16.16■□□□□ 0.18
RFPL1O75677 SFN-201ENST00000339276 1320 ntAPPRIS P1 BASIC16.16■□□□□ 0.18
RFPL1O75677 SERHL2-203ENST00000340239 1315 ntTSL 5 BASIC16.16■□□□□ 0.18
RFPL1O75677 API5-202ENST00000420461 2009 ntTSL 2 BASIC16.16■□□□□ 0.18
RFPL1O75677 MAGI1-216ENST00000497477 3555 ntTSL 5 BASIC16.16■□□□□ 0.18
RFPL1O75677 FLAD1-201ENST00000292180 2160 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
RFPL1O75677 FUT3-209ENST00000589918 2182 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
RFPL1O75677 RAB33B-201ENST00000305626 4562 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
RFPL1O75677 DHX36-201ENST00000308361 3487 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
RFPL1O75677 DGKZ-205ENST00000456247 3482 ntAPPRIS ALT2 TSL 1 (best) BASIC16.15■□□□□ 0.18
RFPL1O75677 ATP6V0A1-204ENST00000537728 2774 ntTSL 2 BASIC16.15■□□□□ 0.18
RFPL1O75677 RBFOX3-211ENST00000583458 2934 ntAPPRIS ALT2 TSL 5 BASIC16.15■□□□□ 0.18
RFPL1O75677 ADGRA1-202ENST00000392607 4283 ntAPPRIS P2 TSL 5 BASIC16.15■□□□□ 0.18
RFPL1O75677 ENOSF1-202ENST00000340116 1658 ntTSL 5 BASIC16.15■□□□□ 0.18
RFPL1O75677 PSMA8-202ENST00000343848 1675 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
RFPL1O75677 FGFR2-207ENST00000359354 1680 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
RFPL1O75677 HIST1H2AC-202ENST00000377791 1654 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
RFPL1O75677 GABRD-218ENST00000640949 1684 ntTSL 5 BASIC16.15■□□□□ 0.18
RFPL1O75677 UEVLD-203ENST00000379387 1848 ntTSL 2 BASIC16.15■□□□□ 0.18
RFPL1O75677 C14orf93-207ENST00000397382 1986 ntAPPRIS P1 TSL 5 BASIC16.15■□□□□ 0.18
RFPL1O75677 SLC29A1-206ENST00000371755 2112 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
RFPL1O75677 NISCH-202ENST00000420808 2589 ntAPPRIS ALT2 TSL 5 BASIC16.15■□□□□ 0.18
Retrieved 100 of 98,524 protein–RNA pairs in 36.5 ms