Protein–RNA interactions for Protein: O75473

LGR5, Leucine-rich repeat-containing G-protein coupled receptor 5, humanhuman

Predictions only

Length 907 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LGR5O75473 SNX31-201ENST00000311812 2457 ntAPPRIS P1 TSL 2 BASIC17.78■□□□□ 0.44
LGR5O75473 SPAST-202ENST00000345662 5116 ntAPPRIS ALT1 TSL 1 (best) BASIC17.78■□□□□ 0.44
LGR5O75473 SEPT8-204ENST00000378699 2289 ntTSL 5 BASIC17.78■□□□□ 0.44
LGR5O75473 IGHA1-202ENST00000641837 1310 ntAPPRIS P5 BASIC17.78■□□□□ 0.44
LGR5O75473 ACSM1-204ENST00000520010 1894 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
LGR5O75473 DMAC2-201ENST00000221943 1692 ntAPPRIS P1 TSL 2 BASIC17.78■□□□□ 0.44
LGR5O75473 SLC19A2-202ENST00000367804 2976 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
LGR5O75473 ATP6V0E2-212ENST00000611515 2565 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
LGR5O75473 AGTRAP-202ENST00000376627 1055 ntTSL 5 BASIC17.78■□□□□ 0.44
LGR5O75473 PQLC3-202ENST00000402361 696 ntTSL 2 BASIC17.78■□□□□ 0.44
LGR5O75473 MIR1909-201ENST00000411312 80 ntBASIC17.78■□□□□ 0.44
LGR5O75473 AL133456.1-201ENST00000415655 577 ntTSL 4 BASIC17.78■□□□□ 0.44
LGR5O75473 AC112492.5-201ENST00000421897 457 ntBASIC17.78■□□□□ 0.44
LGR5O75473 MOGAT3-203ENST00000440203 1219 ntAPPRIS ALT2 TSL 2 BASIC17.78■□□□□ 0.44
LGR5O75473 NME4-207ENST00000450036 985 ntTSL 3 BASIC17.78■□□□□ 0.44
LGR5O75473 ELK1P1-201ENST00000485699 580 ntBASIC17.78■□□□□ 0.44
LGR5O75473 RCHY1-210ENST00000513257 759 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
LGR5O75473 AC025442.1-201ENST00000521596 481 ntTSL 2 BASIC17.78■□□□□ 0.44
LGR5O75473 KRT17P8-201ENST00000540749 863 ntBASIC17.78■□□□□ 0.44
LGR5O75473 AC123567.1-201ENST00000548294 1261 ntBASIC17.78■□□□□ 0.44
LGR5O75473 MALAT1-213ENST00000618227 593 ntTSL 3 BASIC17.78■□□□□ 0.44
LGR5O75473 PLBD2-201ENST00000280800 4800 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
LGR5O75473 DEK-201ENST00000244776 1441 ntTSL 2 BASIC17.78■□□□□ 0.44
LGR5O75473 TSPEAR-202ENST00000397916 2114 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
LGR5O75473 HPS1-202ENST00000338546 1580 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
LGR5O75473 SLC22A1-202ENST00000366963 1948 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
LGR5O75473 DDC-202ENST00000380984 1366 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
LGR5O75473 SPRED3-201ENST00000338502 4778 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
LGR5O75473 TAF1B-201ENST00000263663 2387 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
LGR5O75473 AC005253.1-201ENST00000597411 2001 ntTSL 4 BASIC17.77■□□□□ 0.44
LGR5O75473 RARA-206ENST00000425707 3041 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
LGR5O75473 CHRDL1-204ENST00000444321 1658 ntAPPRIS ALT1 TSL 1 (best) BASIC17.77■□□□□ 0.44
LGR5O75473 UEVLD-203ENST00000379387 1848 ntTSL 2 BASIC17.77■□□□□ 0.44
LGR5O75473 DDOST-206ENST00000602624 1963 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
LGR5O75473 LSMEM2-201ENST00000316436 1494 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
LGR5O75473 DENR-201ENST00000280557 2769 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
LGR5O75473 BMI1-201ENST00000376663 3428 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
LGR5O75473 PRPF31-203ENST00000419967 2269 ntTSL 5 BASIC17.77■□□□□ 0.44
LGR5O75473 SYNGAP1-202ENST00000418600 5828 ntTSL 5 BASIC17.77■□□□□ 0.44
LGR5O75473 CDC73-201ENST00000367435 4969 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
LGR5O75473 MIR648-201ENST00000385046 94 ntBASIC17.77■□□□□ 0.44
LGR5O75473 RAB34-206ENST00000415040 1293 ntTSL 2 BASIC17.77■□□□□ 0.44
LGR5O75473 AC136604.1-201ENST00000418535 575 ntBASIC17.77■□□□□ 0.44
LGR5O75473 H2AFV-207ENST00000446531 1041 ntTSL 2 BASIC17.77■□□□□ 0.44
LGR5O75473 MYCLP2-201ENST00000449268 967 ntBASIC17.77■□□□□ 0.44
LGR5O75473 RN7SL837P-201ENST00000463010 287 ntBASIC17.77■□□□□ 0.44
LGR5O75473 LINC01184-209ENST00000514573 609 ntTSL 3 BASIC17.77■□□□□ 0.44
LGR5O75473 PNOC-204ENST00000522209 1007 ntTSL 2 BASIC17.77■□□□□ 0.44
LGR5O75473 TMEM218-210ENST00000529609 734 ntTSL 3 BASIC17.77■□□□□ 0.44
LGR5O75473 AC009163.1-201ENST00000530512 573 ntTSL 4 BASIC17.77■□□□□ 0.44
LGR5O75473 LINC02356-202ENST00000552663 314 ntTSL 3 BASIC17.77■□□□□ 0.44
LGR5O75473 AC008969.1-205ENST00000553254 876 ntTSL 2 BASIC17.77■□□□□ 0.44
LGR5O75473 RAB43P1-201ENST00000561790 589 ntBASIC17.77■□□□□ 0.44
LGR5O75473 GABARAPL2-202ENST00000563744 791 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
LGR5O75473 ELOF1-206ENST00000590700 585 ntAPPRIS P1 TSL 3 BASIC17.77■□□□□ 0.44
LGR5O75473 MIR6805-201ENST00000615055 62 ntBASIC17.77■□□□□ 0.44
LGR5O75473 MGLL-204ENST00000434178 4941 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
LGR5O75473 PIAS4-201ENST00000262971 3159 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
LGR5O75473 ZNF385A-212ENST00000551109 2369 ntTSL 5 BASIC17.77■□□□□ 0.44
LGR5O75473 CAMK2B-208ENST00000395747 1557 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
LGR5O75473 ZYG11A-202ENST00000371532 3942 ntTSL 5 BASIC17.77■□□□□ 0.44
LGR5O75473 OAZ2-207ENST00000560258 1744 ntTSL 5 BASIC17.77■□□□□ 0.44
LGR5O75473 COQ8B-201ENST00000243583 2041 ntAPPRIS ALT2 TSL 1 (best) BASIC17.77■□□□□ 0.43
LGR5O75473 PCTP-201ENST00000268896 2044 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
LGR5O75473 NEIL2-204ENST00000455213 2323 ntAPPRIS P1 TSL 5 BASIC17.77■□□□□ 0.43
LGR5O75473 SEMA3B-213ENST00000618865 2925 ntAPPRIS P3 TSL 5 BASIC17.77■□□□□ 0.43
LGR5O75473 DACH1-202ENST00000613252 5233 ntAPPRIS P2 TSL 1 (best) BASIC17.77■□□□□ 0.43
LGR5O75473 IDH3B-201ENST00000380843 1545 ntAPPRIS P4 TSL 1 (best) BASIC17.77■□□□□ 0.43
LGR5O75473 ZBTB32-201ENST00000262630 1960 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
LGR5O75473 SLFNL1-201ENST00000302946 1951 ntAPPRIS P3 TSL 1 (best) BASIC17.77■□□□□ 0.43
LGR5O75473 SLC22A16-202ENST00000368919 1987 ntAPPRIS P2 TSL 1 (best) BASIC17.77■□□□□ 0.43
LGR5O75473 REXO1L1P-202ENST00000608646 1974 ntBASIC17.77■□□□□ 0.43
LGR5O75473 IFT74-203ENST00000433700 2119 ntAPPRIS P1 TSL 5 BASIC17.77■□□□□ 0.43
LGR5O75473 TMEM97-201ENST00000226230 2568 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
LGR5O75473 CDCA5-201ENST00000275517 2587 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
LGR5O75473 BX088651.4-201ENST00000435586 2579 ntTSL 2 BASIC17.77■□□□□ 0.43
LGR5O75473 GUCY1A2-202ENST00000347596 2532 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
LGR5O75473 PSEN2-203ENST00000422240 1947 ntAPPRIS ALT1 TSL 2 BASIC17.76■□□□□ 0.43
LGR5O75473 PCBP1-201ENST00000303577 1750 ntAPPRIS P1 BASIC17.76■□□□□ 0.43
LGR5O75473 DMRT2-202ENST00000302441 1495 ntTSL 5 BASIC17.76■□□□□ 0.43
LGR5O75473 HIST1H2AC-203ENST00000602637 1462 ntAPPRIS P1 TSL 2 BASIC17.76■□□□□ 0.43
LGR5O75473 PCDH8P1-201ENST00000428983 2773 ntBASIC17.76■□□□□ 0.43
LGR5O75473 RIMS4-201ENST00000372851 5203 ntAPPRIS P3 TSL 1 (best) BASIC17.76■□□□□ 0.43
LGR5O75473 SUSD4-202ENST00000343846 3480 ntAPPRIS P1 TSL 2 BASIC17.76■□□□□ 0.43
LGR5O75473 CELF6-201ENST00000287202 3345 ntAPPRIS P3 TSL 1 (best) BASIC17.76■□□□□ 0.43
LGR5O75473 POLG2-201ENST00000539111 1564 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
LGR5O75473 TCAF2-203ENST00000425618 2448 ntTSL 2 BASIC17.76■□□□□ 0.43
LGR5O75473 ZDHHC13-202ENST00000446113 2445 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
LGR5O75473 TEAD2-203ENST00000539846 1444 ntTSL 2 BASIC17.76■□□□□ 0.43
LGR5O75473 EEF1B2-201ENST00000236957 844 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
LGR5O75473 PRPF31-201ENST00000321030 2126 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
LGR5O75473 STPG3-201ENST00000388931 1207 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
LGR5O75473 AL513303.2-201ENST00000413339 536 ntTSL 2 BASIC17.76■□□□□ 0.43
LGR5O75473 AL645941.1-201ENST00000415875 338 ntTSL 3 BASIC17.76■□□□□ 0.43
LGR5O75473 AL161638.1-201ENST00000420354 481 ntTSL 3 BASIC17.76■□□□□ 0.43
LGR5O75473 AL669970.3-201ENST00000435284 428 ntTSL 3 BASIC17.76■□□□□ 0.43
LGR5O75473 RPS2P32-201ENST00000439199 892 ntBASIC17.76■□□□□ 0.43
LGR5O75473 SNHG6-201ENST00000520348 648 ntTSL 2 BASIC17.76■□□□□ 0.43
LGR5O75473 AP000721.1-201ENST00000535431 559 ntAPPRIS P1 TSL 5 BASIC17.76■□□□□ 0.43
LGR5O75473 HNRNPUP1-201ENST00000554987 333 ntBASIC17.76■□□□□ 0.43
Retrieved 100 of 98,524 protein–RNA pairs in 30.5 ms