Protein–RNA interactions for Protein: O60925

PFDN1, Prefoldin subunit 1, humanhuman

Predictions only

Length 122 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PFDN1O60925 ATG9B-203ENST00000469530 3489 ntAPPRIS P1 TSL 5 BASIC14.36□□□□□ -0.11
PFDN1O60925 AP003717.1-202ENST00000537019 1412 ntTSL 5 BASIC14.36□□□□□ -0.11
PFDN1O60925 C6orf62-202ENST00000378119 4134 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
PFDN1O60925 SCFD2-201ENST00000388940 2221 ntTSL 2 BASIC14.36□□□□□ -0.11
PFDN1O60925 JTB-203ENST00000368589 1216 ntTSL 2 BASIC14.36□□□□□ -0.11
PFDN1O60925 CCDC124-201ENST00000445755 938 ntAPPRIS P1 TSL 2 BASIC14.36□□□□□ -0.11
PFDN1O60925 SMIM29-206ENST00000476320 1297 ntAPPRIS P1 TSL 2 BASIC14.36□□□□□ -0.11
PFDN1O60925 DBI-210ENST00000542275 757 ntTSL 5 BASIC14.36□□□□□ -0.11
PFDN1O60925 DUX4L16-201ENST00000555130 1264 ntBASIC14.36□□□□□ -0.11
PFDN1O60925 AC009065.1-201ENST00000564055 1225 ntBASIC14.36□□□□□ -0.11
PFDN1O60925 CCDC124-203ENST00000597436 1055 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
PFDN1O60925 AL365205.1-204ENST00000359201 2098 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
PFDN1O60925 DAAM2-202ENST00000398904 6224 ntAPPRIS ALT1 TSL 5 BASIC14.36□□□□□ -0.11
PFDN1O60925 SOGA1-201ENST00000237536 14371 ntAPPRIS ALT2 TSL 5 BASIC14.36□□□□□ -0.11
PFDN1O60925 ZMIZ1-AS1-203ENST00000456353 2878 ntTSL 2 BASIC14.36□□□□□ -0.11
PFDN1O60925 SPHK2-206ENST00000598088 2866 ntAPPRIS P3 TSL 1 (best) BASIC14.36□□□□□ -0.11
PFDN1O60925 DLGAP1-205ENST00000400150 5332 ntTSL 5 BASIC14.36□□□□□ -0.11
PFDN1O60925 AP1M2-207ENST00000590923 1757 ntAPPRIS ALT1 TSL 1 (best) BASIC14.36□□□□□ -0.11
PFDN1O60925 TAGLN2-202ENST00000368096 1603 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
PFDN1O60925 CCDC136-212ENST00000487361 2268 ntAPPRIS ALT2 TSL 5 BASIC14.36□□□□□ -0.11
PFDN1O60925 RANBP17-219ENST00000523189 4588 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
PFDN1O60925 TMEM229B-207ENST00000557006 3941 ntAPPRIS P1 TSL 5 BASIC14.36□□□□□ -0.11
PFDN1O60925 NXNL2-202ENST00000375855 1457 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
PFDN1O60925 NFATC2-202ENST00000396009 7437 ntAPPRIS P3 TSL 1 (best) BASIC14.36□□□□□ -0.11
PFDN1O60925 SREBF1-205ENST00000395757 3696 ntAPPRIS ALT2 TSL 2 BASIC14.36□□□□□ -0.11
PFDN1O60925 ABCC10-204ENST00000372530 5033 ntAPPRIS ALT2 TSL 2 BASIC14.36□□□□□ -0.11
PFDN1O60925 ZNF57-201ENST00000306908 2003 ntAPPRIS P2 TSL 1 (best) BASIC14.36□□□□□ -0.11
PFDN1O60925 CHRD-206ENST00000450923 3384 ntAPPRIS ALT2 TSL 1 (best) BASIC14.36□□□□□ -0.11
PFDN1O60925 ZNF57-205ENST00000614108 2002 ntAPPRIS ALT2 TSL 5 BASIC14.36□□□□□ -0.11
PFDN1O60925 PEX13-204ENST00000444100 1533 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
PFDN1O60925 LAP3-201ENST00000226299 2213 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
PFDN1O60925 TWSG1-201ENST00000262120 3756 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
PFDN1O60925 GDPGP1-202ENST00000558017 5323 ntAPPRIS P1 TSL 2 BASIC14.35□□□□□ -0.11
PFDN1O60925 GRTP1-203ENST00000375431 1384 ntAPPRIS P3 TSL 1 (best) BASIC14.35□□□□□ -0.11
PFDN1O60925 RNF26-201ENST00000311413 2787 ntAPPRIS P1 BASIC14.35□□□□□ -0.11
PFDN1O60925 AC125611.4-201ENST00000553259 4166 ntTSL 2 BASIC14.35□□□□□ -0.11
PFDN1O60925 CACNA1G-214ENST00000505165 6633 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
PFDN1O60925 FXYD6-201ENST00000260282 1929 ntAPPRIS P2 TSL 1 (best) BASIC14.35□□□□□ -0.11
PFDN1O60925 ALOX15B-201ENST00000380173 2605 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
PFDN1O60925 CALD1-204ENST00000417172 1915 ntTSL 5 BASIC14.35□□□□□ -0.11
PFDN1O60925 KIF25-AS1-201ENST00000414364 1420 ntTSL 2 BASIC14.35□□□□□ -0.11
PFDN1O60925 PRICKLE1-203ENST00000455697 4277 ntAPPRIS P1 TSL 5 BASIC14.35□□□□□ -0.11
PFDN1O60925 PCDHGA3-203ENST00000619750 2695 ntAPPRIS ALT2 BASIC14.35□□□□□ -0.11
PFDN1O60925 ABCB8-202ENST00000358849 4683 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
PFDN1O60925 P2RY6-209ENST00000540342 1611 ntAPPRIS P1 TSL 2 BASIC14.35□□□□□ -0.11
PFDN1O60925 LOX-206ENST00000639739 1626 ntTSL 5 BASIC14.35□□□□□ -0.11
PFDN1O60925 GCKR-201ENST00000264717 2186 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
PFDN1O60925 C1QTNF1-203ENST00000354124 2714 ntAPPRIS P1 TSL 4 BASIC14.35□□□□□ -0.11
PFDN1O60925 CITED1-201ENST00000246139 1231 ntAPPRIS P3 TSL 1 (best) BASIC14.35□□□□□ -0.11
PFDN1O60925 COQ10B-203ENST00000409398 879 ntTSL 3 BASIC14.35□□□□□ -0.11
PFDN1O60925 PHYHD1-207ENST00000421063 1182 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
PFDN1O60925 AC009061.1-201ENST00000567261 475 ntTSL 3 BASIC14.35□□□□□ -0.11
PFDN1O60925 PPHLN1-201ENST00000256678 1820 ntTSL 2 BASIC14.35□□□□□ -0.11
PFDN1O60925 JAKMIP1-205ENST00000410077 1835 ntTSL 2 BASIC14.35□□□□□ -0.11
PFDN1O60925 THUMPD3-210ENST00000515662 2390 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
PFDN1O60925 AC005253.1-201ENST00000597411 2001 ntTSL 4 BASIC14.35□□□□□ -0.11
PFDN1O60925 SGSH-201ENST00000326317 2784 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
PFDN1O60925 UQCC1-204ENST00000374384 2201 ntTSL 2 BASIC14.35□□□□□ -0.11
PFDN1O60925 POLD1-214ENST00000613923 3542 ntTSL 5 BASIC14.35□□□□□ -0.11
PFDN1O60925 USP2-201ENST00000260187 3732 ntAPPRIS P4 TSL 1 (best) BASIC14.35□□□□□ -0.11
PFDN1O60925 TNIP3-201ENST00000057513 2416 ntAPPRIS P3 TSL 1 (best) BASIC14.35□□□□□ -0.11
PFDN1O60925 HIC2-203ENST00000443632 6940 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
PFDN1O60925 GLB1L2-205ENST00000535456 3365 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
PFDN1O60925 SOGA3-207ENST00000481848 11464 ntAPPRIS P5 TSL 5 BASIC14.35□□□□□ -0.11
PFDN1O60925 BAIAP2-202ENST00000321300 2879 ntAPPRIS P4 TSL 1 (best) BASIC14.35□□□□□ -0.11
PFDN1O60925 MANBAL-201ENST00000373605 1915 ntAPPRIS P1 TSL 2 BASIC14.35□□□□□ -0.11
PFDN1O60925 PRKD2-202ENST00000433867 3321 ntAPPRIS P3 TSL 5 BASIC14.35□□□□□ -0.11
PFDN1O60925 SH2D5-201ENST00000375031 3705 ntTSL 2 BASIC14.35□□□□□ -0.11
PFDN1O60925 CD9-203ENST00000382518 1556 ntAPPRIS P1 TSL 5 BASIC14.34□□□□□ -0.11
PFDN1O60925 DTWD1-202ENST00000403028 1584 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
PFDN1O60925 GDF2-201ENST00000581492 1955 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
PFDN1O60925 MYLK-202ENST00000354792 7531 ntAPPRIS ALT2 TSL 5 BASIC14.34□□□□□ -0.11
PFDN1O60925 MICAL1-202ENST00000358807 3645 ntAPPRIS P3 TSL 1 (best) BASIC14.34□□□□□ -0.11
PFDN1O60925 KANK2-205ENST00000589359 3048 ntAPPRIS ALT2 TSL 5 BASIC14.34□□□□□ -0.11
PFDN1O60925 NRSN1-203ENST00000378478 2408 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
PFDN1O60925 AJ239322.1-201ENST00000419362 2209 ntTSL 2 BASIC14.34□□□□□ -0.11
PFDN1O60925 ATG101-201ENST00000336854 1439 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
PFDN1O60925 SDCBP2-201ENST00000339987 1404 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
PFDN1O60925 ARID3C-201ENST00000378909 1411 ntAPPRIS P1 TSL 2 BASIC14.34□□□□□ -0.11
PFDN1O60925 PELP1-201ENST00000301396 3673 ntAPPRIS P2 TSL 1 (best) BASIC14.34□□□□□ -0.11
PFDN1O60925 PPME1-201ENST00000328257 2677 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
PFDN1O60925 PLA2G4F-202ENST00000397272 5587 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
PFDN1O60925 DNAJC22-201ENST00000395069 2059 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
PFDN1O60925 LINC00116-201ENST00000414416 2051 ntAPPRIS P5 TSL 1 (best) BASIC14.34□□□□□ -0.11
PFDN1O60925 CYB5D1-203ENST00000571846 1870 ntTSL 5 BASIC14.34□□□□□ -0.11
PFDN1O60925 PSEN2-202ENST00000366783 2306 ntAPPRIS P3 TSL 5 BASIC14.34□□□□□ -0.11
PFDN1O60925 IL17C-201ENST00000244241 1044 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
PFDN1O60925 IFI6-203ENST00000362020 828 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
PFDN1O60925 S100A6-201ENST00000368719 665 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
PFDN1O60925 EP300-AS1-201ENST00000420537 457 ntTSL 3 BASIC14.34□□□□□ -0.11
PFDN1O60925 APTR-203ENST00000430801 583 ntTSL 5 BASIC14.34□□□□□ -0.11
PFDN1O60925 NEBL-AS1-202ENST00000439097 661 ntTSL 2 BASIC14.34□□□□□ -0.11
PFDN1O60925 LILRB5-203ENST00000449561 2137 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
PFDN1O60925 ZNF717-203ENST00000477374 1169 ntTSL 2 BASIC14.34□□□□□ -0.11
PFDN1O60925 CAPN5-206ENST00000531028 534 ntTSL 5 BASIC14.34□□□□□ -0.11
PFDN1O60925 TESMIN-209ENST00000544963 1235 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
PFDN1O60925 SGMS1-203ENST00000429490 3634 ntTSL 5 BASIC14.34□□□□□ -0.11
PFDN1O60925 ENO2-214ENST00000545045 1911 ntTSL 5 BASIC14.34□□□□□ -0.11
PFDN1O60925 SNCAIP-203ENST00000379538 2588 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
PFDN1O60925 LINC00163-201ENST00000434081 2155 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Retrieved 100 of 98,524 protein–RNA pairs in 35.4 ms