Protein–RNA interactions for Protein: O43525

KCNQ3, Potassium voltage-gated channel subfamily KQT member 3, humanhuman

Predictions only

Length 872 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KCNQ3O43525 AC107871.1-202ENST00000562767 3389 ntAPPRIS P1 TSL 3 BASIC20.43■□□□□ 0.86
KCNQ3O43525 PPDPF-201ENST00000370177 627 ntTSL 2 BASIC20.43■□□□□ 0.86
KCNQ3O43525 AGTRAP-202ENST00000376627 1055 ntTSL 5 BASIC20.43■□□□□ 0.86
KCNQ3O43525 LNCPRESS1-201ENST00000429254 756 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
KCNQ3O43525 AP001360.1-202ENST00000526934 479 ntTSL 3 BASIC20.43■□□□□ 0.86
KCNQ3O43525 AC021054.1-202ENST00000543884 599 ntTSL 3 BASIC20.43■□□□□ 0.86
KCNQ3O43525 NAA38-206ENST00000576384 424 ntTSL 2 BASIC20.43■□□□□ 0.86
KCNQ3O43525 AC079336.2-201ENST00000578408 927 ntTSL 3 BASIC20.43■□□□□ 0.86
KCNQ3O43525 SNAP47-AS1-201ENST00000413347 1708 ntTSL 2 BASIC20.43■□□□□ 0.86
KCNQ3O43525 RUSC1-201ENST00000292254 2163 ntAPPRIS P3 TSL 1 (best) BASIC20.43■□□□□ 0.86
KCNQ3O43525 TADA1-201ENST00000367874 2159 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
KCNQ3O43525 SEPT9-237ENST00000591198 2160 ntTSL 2 BASIC20.43■□□□□ 0.86
KCNQ3O43525 NOMO1-208ENST00000620755 3921 ntAPPRIS ALT2 TSL 1 (best) BASIC20.43■□□□□ 0.86
KCNQ3O43525 UBQLN1-201ENST00000257468 2299 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
KCNQ3O43525 TRMT44-201ENST00000389737 2799 ntAPPRIS P2 TSL 5 BASIC20.43■□□□□ 0.86
KCNQ3O43525 AZIN1-201ENST00000337198 4721 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
KCNQ3O43525 MIB2-217ENST00000504599 3311 ntAPPRIS ALT2 TSL 2 BASIC20.43■□□□□ 0.86
KCNQ3O43525 MAPKAP1-208ENST00000394063 2977 ntTSL 5 BASIC20.43■□□□□ 0.86
KCNQ3O43525 ARL4C-202ENST00000390645 4013 ntAPPRIS P1 BASIC20.43■□□□□ 0.86
KCNQ3O43525 RARA-206ENST00000425707 3041 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
KCNQ3O43525 TMEM222-210ENST00000608611 1511 ntAPPRIS ALT1 TSL 1 (best) BASIC20.43■□□□□ 0.86
KCNQ3O43525 RABEPK-206ENST00000628863 1537 ntTSL 5 BASIC20.43■□□□□ 0.86
KCNQ3O43525 GAREM2-202ENST00000407684 5138 ntTSL 2 BASIC20.42■□□□□ 0.86
KCNQ3O43525 HPS1-202ENST00000338546 1580 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
KCNQ3O43525 GOLIM4-201ENST00000309027 2100 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
KCNQ3O43525 FOXN1-203ENST00000579795 2145 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
KCNQ3O43525 PCCB-218ENST00000490504 1613 ntTSL 3 BASIC20.42■□□□□ 0.86
KCNQ3O43525 EPHX2-202ENST00000517536 1600 ntTSL 5 BASIC20.42■□□□□ 0.86
KCNQ3O43525 KANSL2-212ENST00000550347 2714 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
KCNQ3O43525 ZNF853-201ENST00000457543 3857 ntAPPRIS P1 TSL 3 BASIC20.42■□□□□ 0.86
KCNQ3O43525 SLC27A1-201ENST00000252595 3594 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
KCNQ3O43525 WNT10B-203ENST00000407467 1802 ntTSL 2 BASIC20.42■□□□□ 0.86
KCNQ3O43525 ITM2C-201ENST00000326407 1888 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
KCNQ3O43525 CBSL-201ENST00000398168 2514 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
KCNQ3O43525 ETFB-201ENST00000309244 900 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
KCNQ3O43525 MAGEA12-203ENST00000393900 1299 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
KCNQ3O43525 PQLC3-202ENST00000402361 696 ntTSL 2 BASIC20.42■□□□□ 0.86
KCNQ3O43525 AL442647.2-201ENST00000429864 857 ntBASIC20.42■□□□□ 0.86
KCNQ3O43525 AJ271736.1-201ENST00000483543 773 ntTSL 5 BASIC20.42■□□□□ 0.86
KCNQ3O43525 BRF2-202ENST00000520601 1192 ntTSL 3 BASIC20.42■□□□□ 0.86
KCNQ3O43525 LINC01595-201ENST00000555406 639 ntTSL 3 BASIC20.42■□□□□ 0.86
KCNQ3O43525 C17orf62-239ENST00000585080 741 ntAPPRIS P1 TSL 5 BASIC20.42■□□□□ 0.86
KCNQ3O43525 AC011497.1-201ENST00000596781 561 ntTSL 4 BASIC20.42■□□□□ 0.86
KCNQ3O43525 AC131235.3-202ENST00000608135 362 ntTSL 5 BASIC20.42■□□□□ 0.86
KCNQ3O43525 RPP40-207ENST00000618533 1056 ntTSL 5 BASIC20.42■□□□□ 0.86
KCNQ3O43525 KISS1-202ENST00000625357 435 ntAPPRIS ALT2 TSL 5 BASIC20.42■□□□□ 0.86
KCNQ3O43525 BX088651.4-201ENST00000435586 2579 ntTSL 2 BASIC20.42■□□□□ 0.86
KCNQ3O43525 FHL1-207ENST00000394155 2706 ntTSL 5 BASIC20.42■□□□□ 0.86
KCNQ3O43525 KCTD11-201ENST00000333751 2783 ntAPPRIS P1 BASIC20.42■□□□□ 0.86
KCNQ3O43525 GCH1-204ENST00000491895 2943 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
KCNQ3O43525 RAPSN-202ENST00000352508 1452 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
KCNQ3O43525 AADAT-201ENST00000337664 2261 ntAPPRIS P3 TSL 1 (best) BASIC20.42■□□□□ 0.86
KCNQ3O43525 TUBA3E-201ENST00000312988 1542 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
KCNQ3O43525 TMEM222-211ENST00000611517 1613 ntAPPRIS P2 TSL 1 (best) BASIC20.42■□□□□ 0.86
KCNQ3O43525 ASB7-202ENST00000343276 1694 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
KCNQ3O43525 ELN-221ENST00000445912 2583 ntAPPRIS ALT2 TSL 2 BASIC20.41■□□□□ 0.86
KCNQ3O43525 CYP2R1-207ENST00000532378 1746 ntTSL 5 BASIC20.41■□□□□ 0.86
KCNQ3O43525 RBPMS2-202ENST00000560606 1746 ntTSL 2 BASIC20.41■□□□□ 0.86
KCNQ3O43525 PRKCD-201ENST00000330452 2680 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
KCNQ3O43525 ATP6AP2-226ENST00000637526 1862 ntAPPRIS ALT2 TSL 5 BASIC20.41■□□□□ 0.86
KCNQ3O43525 SQLE-201ENST00000265896 2961 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
KCNQ3O43525 KCNJ12-201ENST00000331718 2198 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
KCNQ3O43525 C14orf93-202ENST00000341470 2221 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
KCNQ3O43525 GPR135-201ENST00000395116 4578 ntAPPRIS P1 BASIC20.41■□□□□ 0.86
KCNQ3O43525 CYMP-AS1-201ENST00000457402 2351 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
KCNQ3O43525 WT1-209ENST00000530998 2421 ntTSL 2 BASIC20.41■□□□□ 0.86
KCNQ3O43525 TAP2-202ENST00000374899 2497 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
KCNQ3O43525 UCHL3-201ENST00000377595 844 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
KCNQ3O43525 AC021491.2-201ENST00000513017 607 ntTSL 3 BASIC20.41■□□□□ 0.86
KCNQ3O43525 AC083973.1-206ENST00000518213 815 ntTSL 3 BASIC20.41■□□□□ 0.86
KCNQ3O43525 ATXN2-AS-201ENST00000547021 485 ntTSL 2 BASIC20.41■□□□□ 0.86
KCNQ3O43525 C12orf10-204ENST00000548632 988 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
KCNQ3O43525 AC124283.3-201ENST00000570869 594 ntBASIC20.41■□□□□ 0.86
KCNQ3O43525 GPX4-206ENST00000588919 803 ntTSL 2 BASIC20.41■□□□□ 0.86
KCNQ3O43525 FAM66C-209ENST00000544214 2623 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
KCNQ3O43525 EWSR1-206ENST00000397938 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC20.41■□□□□ 0.86
KCNQ3O43525 ENC1-201ENST00000302351 5520 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
KCNQ3O43525 SYVN1-202ENST00000307289 2841 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
KCNQ3O43525 KRT8P22-201ENST00000562317 1415 ntBASIC20.41■□□□□ 0.86
KCNQ3O43525 SSC5D-201ENST00000389623 4845 ntAPPRIS P3 TSL 1 (best) BASIC20.41■□□□□ 0.86
KCNQ3O43525 GFAP-233ENST00000639277 1783 ntTSL 5 BASIC20.41■□□□□ 0.86
KCNQ3O43525 PHLDA1-202ENST00000602540 5741 ntAPPRIS ALT2 TSL 1 (best) BASIC20.41■□□□□ 0.86
KCNQ3O43525 CTSB-201ENST00000345125 2028 ntAPPRIS P1 TSL 5 BASIC20.41■□□□□ 0.86
KCNQ3O43525 DLC1-203ENST00000358919 4392 ntAPPRIS ALT2 TSL 1 (best) BASIC20.41■□□□□ 0.86
KCNQ3O43525 NSUN5-203ENST00000428206 2269 ntAPPRIS ALT2 TSL 2 BASIC20.41■□□□□ 0.86
KCNQ3O43525 SULF2-201ENST00000359930 4915 ntAPPRIS P4 TSL 1 (best) BASIC20.4■□□□□ 0.86
KCNQ3O43525 SLMAP-201ENST00000295951 5433 ntAPPRIS P1 TSL 5 BASIC20.4■□□□□ 0.86
KCNQ3O43525 MIOX-201ENST00000216075 1130 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
KCNQ3O43525 EFNB3-201ENST00000226091 3222 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
KCNQ3O43525 SMO-201ENST00000249373 3738 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
KCNQ3O43525 PDE4C-201ENST00000262805 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC20.4■□□□□ 0.86
KCNQ3O43525 WDR45-202ENST00000356463 1688 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
KCNQ3O43525 PKIG-203ENST00000372887 769 ntTSL 3 BASIC20.4■□□□□ 0.86
KCNQ3O43525 CCDC107-204ENST00000378409 1173 ntAPPRIS ALT2 TSL 1 (best) BASIC20.4■□□□□ 0.86
KCNQ3O43525 FAM221A-203ENST00000409653 761 ntTSL 5 BASIC20.4■□□□□ 0.86
KCNQ3O43525 FAM221A-204ENST00000409994 1136 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
KCNQ3O43525 FBP1-203ENST00000415431 1487 ntAPPRIS P1 TSL 2 BASIC20.4■□□□□ 0.86
KCNQ3O43525 HIST1H2BPS3-201ENST00000419683 341 ntBASIC20.4■□□□□ 0.86
KCNQ3O43525 RPS2P32-201ENST00000439199 892 ntBASIC20.4■□□□□ 0.86
KCNQ3O43525 RALY-AS1-203ENST00000440595 660 ntTSL 3 BASIC20.4■□□□□ 0.86
Retrieved 100 of 98,524 protein–RNA pairs in 75.9 ms