Protein–RNA interactions for Protein: O43175

PHGDH, D-3-phosphoglycerate dehydrogenase, humanhuman

Known RBP Predictions only

Length 533 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDHO43175 ZNF197-203ENST00000383744 1989 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
PHGDHO43175 GRID2IP-201ENST00000435185 3215 ntTSL 5 BASIC16.06■□□□□ 0.16
PHGDHO43175 YY1AP1-210ENST00000368339 3073 ntAPPRIS ALT2 TSL 2 BASIC16.05■□□□□ 0.16
PHGDHO43175 AQP3-201ENST00000297991 1849 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
PHGDHO43175 UEVLD-203ENST00000379387 1848 ntTSL 2 BASIC16.05■□□□□ 0.16
PHGDHO43175 CBWD1-201ENST00000314367 1771 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
PHGDHO43175 AC012507.2-203ENST00000415628 1765 ntTSL 3 BASIC16.05■□□□□ 0.16
PHGDHO43175 ALMS1P1-202ENST00000450720 1601 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
PHGDHO43175 PRR19-204ENST00000598490 1641 ntAPPRIS ALT2 TSL 1 (best) BASIC16.05■□□□□ 0.16
PHGDHO43175 GLG1-202ENST00000422840 4748 ntAPPRIS ALT2 TSL 1 (best) BASIC16.05■□□□□ 0.16
PHGDHO43175 DCBLD1-202ENST00000338728 3626 ntAPPRIS ALT2 TSL 5 BASIC16.05■□□□□ 0.16
PHGDHO43175 ZNF276-201ENST00000289816 4589 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
PHGDHO43175 KIF25-202ENST00000354419 1510 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
PHGDHO43175 FBP1-201ENST00000375326 1462 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
PHGDHO43175 FHAD1-205ENST00000375997 1459 ntTSL 3 BASIC16.05■□□□□ 0.16
PHGDHO43175 TNRC18-202ENST00000399434 1459 ntTSL 2 BASIC16.05■□□□□ 0.16
PHGDHO43175 LRFN1-201ENST00000248668 3381 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
PHGDHO43175 PPP1R16B-202ENST00000373331 6106 ntTSL 5 BASIC16.05■□□□□ 0.16
PHGDHO43175 TATDN3-214ENST00000532324 1381 ntTSL 2 BASIC16.05■□□□□ 0.16
PHGDHO43175 SIRT6-214ENST00000601488 1361 ntTSL 3 BASIC16.05■□□□□ 0.16
PHGDHO43175 NSUN5-203ENST00000428206 2269 ntAPPRIS ALT2 TSL 2 BASIC16.05■□□□□ 0.16
PHGDHO43175 CEP19-202ENST00000409690 2201 ntAPPRIS P2 TSL 1 (best) BASIC16.05■□□□□ 0.16
PHGDHO43175 BEX4-202ENST00000372695 1328 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
PHGDHO43175 PMS2P7-201ENST00000506558 1336 ntBASIC16.05■□□□□ 0.16
PHGDHO43175 TBXAS1-201ENST00000336425 2185 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
PHGDHO43175 HSPA4L-204ENST00000508776 3020 ntAPPRIS P1 TSL 2 BASIC16.05■□□□□ 0.16
PHGDHO43175 LIM2-201ENST00000221973 983 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
PHGDHO43175 DCTN3-201ENST00000259632 808 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
PHGDHO43175 C22orf39-201ENST00000333059 1221 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
PHGDHO43175 ZNF593-202ENST00000374266 675 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
PHGDHO43175 FAM19A5-204ENST00000406880 833 ntTSL 3 BASIC16.05■□□□□ 0.16
PHGDHO43175 EPB41L4A-AS1-201ENST00000413221 2969 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
PHGDHO43175 CMPK1-205ENST00000471289 816 ntTSL 2 BASIC16.05■□□□□ 0.16
PHGDHO43175 RPL13AP23-201ENST00000480739 586 ntBASIC16.05■□□□□ 0.16
PHGDHO43175 AL133375.1-201ENST00000500590 980 ntTSL 5 BASIC16.05■□□□□ 0.16
PHGDHO43175 SMN2-210ENST00000511812 867 ntTSL 2 BASIC16.05■□□□□ 0.16
PHGDHO43175 DDIAS-202ENST00000524921 607 ntAPPRIS ALT2 TSL 4 BASIC16.05■□□□□ 0.16
PHGDHO43175 AC009133.1-203ENST00000569039 589 ntTSL 2 BASIC16.05■□□□□ 0.16
PHGDHO43175 AC068137.2-201ENST00000605408 478 ntBASIC16.05■□□□□ 0.16
PHGDHO43175 SBK3-202ENST00000612221 1270 ntAPPRIS P1 TSL 5 BASIC16.05■□□□□ 0.16
PHGDHO43175 C5orf24-204ENST00000504727 2923 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
PHGDHO43175 TFAP2C-201ENST00000201031 2866 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
PHGDHO43175 HSP90B1-201ENST00000299767 2858 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
PHGDHO43175 AGPAT1-202ENST00000375104 2017 ntAPPRIS P1 TSL 2 BASIC16.05■□□□□ 0.16
PHGDHO43175 C2orf54-202ENST00000388934 1911 ntAPPRIS P4 TSL 2 BASIC16.05■□□□□ 0.16
PHGDHO43175 POLR1D-212ENST00000630983 1931 ntTSL 5 BASIC16.05■□□□□ 0.16
PHGDHO43175 LINC02495-201ENST00000508601 4167 ntTSL 2 BASIC16.05■□□□□ 0.16
PHGDHO43175 MLKL-202ENST00000308807 2523 ntAPPRIS P1 TSL 2 BASIC16.05■□□□□ 0.16
PHGDHO43175 PAX6-203ENST00000379109 3182 ntAPPRIS ALT1 TSL 2 BASIC16.05■□□□□ 0.16
PHGDHO43175 SLC39A1-201ENST00000310483 2427 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
PHGDHO43175 GPR161-202ENST00000367835 2400 ntAPPRIS P1 TSL 2 BASIC16.05■□□□□ 0.16
PHGDHO43175 SURF6-201ENST00000372022 4447 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
PHGDHO43175 FAM53C-202ENST00000434981 1686 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
PHGDHO43175 CFLAR-214ENST00000443227 1679 ntTSL 2 BASIC16.05■□□□□ 0.16
PHGDHO43175 NTRK3-202ENST00000355254 2938 ntAPPRIS ALT2 TSL 5 BASIC16.05■□□□□ 0.16
PHGDHO43175 FUT8-213ENST00000557164 2269 ntTSL 2 BASIC16.05■□□□□ 0.16
PHGDHO43175 TCF25-201ENST00000263346 2233 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
PHGDHO43175 SEMA4F-201ENST00000339773 2177 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
PHGDHO43175 ASXL1-210ENST00000613218 7038 ntAPPRIS ALT2 TSL 5 BASIC16.04■□□□□ 0.16
PHGDHO43175 F10-202ENST00000375559 1517 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
PHGDHO43175 CHAF1A-201ENST00000301280 3339 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
PHGDHO43175 CYP4F3-202ENST00000585846 2056 ntAPPRIS ALT1 TSL 1 (best) BASIC16.04■□□□□ 0.16
PHGDHO43175 ELFN1-201ENST00000424383 3845 ntAPPRIS P1 TSL 5 BASIC16.04■□□□□ 0.16
PHGDHO43175 PLXNC1-201ENST00000258526 7346 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
PHGDHO43175 UBE2D1-204ENST00000615793 2621 ntTSL 2 BASIC16.04■□□□□ 0.16
PHGDHO43175 SNHG15-202ENST00000577700 3116 ntTSL 2 BASIC16.04■□□□□ 0.16
PHGDHO43175 AC134407.2-201ENST00000625089 1978 ntBASIC16.04■□□□□ 0.16
PHGDHO43175 GHDC-203ENST00000428494 2518 ntTSL 5 BASIC16.04■□□□□ 0.16
PHGDHO43175 STOML1-204ENST00000541638 6336 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
PHGDHO43175 EIF2B3-210ENST00000620860 1923 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
PHGDHO43175 AC023824.1-201ENST00000562945 2975 ntBASIC16.04■□□□□ 0.16
PHGDHO43175 TMEM30A-201ENST00000230461 4594 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
PHGDHO43175 CCAR2-202ENST00000389279 3980 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
PHGDHO43175 ATRNL1-201ENST00000355044 8479 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
PHGDHO43175 SNURF-201ENST00000338327 331 ntAPPRIS P1 TSL 5 BASIC16.04■□□□□ 0.16
PHGDHO43175 GPRC5C-201ENST00000342648 1273 ntTSL 5 BASIC16.04■□□□□ 0.16
PHGDHO43175 AC245100.5-201ENST00000452108 331 ntBASIC16.04■□□□□ 0.16
PHGDHO43175 AP006621.3-203ENST00000525941 610 ntTSL 2 BASIC16.04■□□□□ 0.16
PHGDHO43175 AL133467.1-201ENST00000554161 993 ntTSL 2 BASIC16.04■□□□□ 0.16
PHGDHO43175 KRT16P2-202ENST00000579062 563 ntTSL 4 BASIC16.04■□□□□ 0.16
PHGDHO43175 AC055811.1-201ENST00000584203 1231 ntTSL 5 BASIC16.04■□□□□ 0.16
PHGDHO43175 MIR4321-201ENST00000592276 80 ntBASIC16.04■□□□□ 0.16
PHGDHO43175 FHL2-212ENST00000607522 759 ntTSL 2 BASIC16.04■□□□□ 0.16
PHGDHO43175 DEF8-228ENST00000610455 816 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
PHGDHO43175 DHX40-202ENST00000425628 2255 ntTSL 2 BASIC16.04■□□□□ 0.16
PHGDHO43175 AC022532.1-201ENST00000624563 1728 ntBASIC16.04■□□□□ 0.16
PHGDHO43175 RRBP1-204ENST00000377813 5041 ntAPPRIS ALT2 TSL 1 (best) BASIC16.04■□□□□ 0.16
PHGDHO43175 ATP6V0E2-212ENST00000611515 2565 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
PHGDHO43175 MBD1-202ENST00000269471 2980 ntAPPRIS ALT2 TSL 5 BASIC16.04■□□□□ 0.16
PHGDHO43175 NIPAL4-201ENST00000311946 3274 ntAPPRIS P3 TSL 1 (best) BASIC16.04■□□□□ 0.16
PHGDHO43175 MRPS22-212ENST00000495075 1547 ntAPPRIS P2 TSL 1 (best) BASIC16.04■□□□□ 0.16
PHGDHO43175 TUSC3-204ENST00000506802 1546 ntTSL 5 BASIC16.04■□□□□ 0.16
PHGDHO43175 HSD17B6-203ENST00000554150 1547 ntAPPRIS P1 TSL 5 BASIC16.04■□□□□ 0.16
PHGDHO43175 PODNL1-204ENST00000538517 2744 ntTSL 2 BASIC16.03■□□□□ 0.16
PHGDHO43175 PIGT-201ENST00000279035 1880 ntTSL 2 BASIC16.03■□□□□ 0.16
PHGDHO43175 PEX5-206ENST00000434354 2253 ntTSL 2 BASIC16.03■□□□□ 0.16
PHGDHO43175 SSR4P1-203ENST00000599569 2260 ntBASIC16.03■□□□□ 0.16
PHGDHO43175 PLTP-204ENST00000420868 1420 ntTSL 2 BASIC16.03■□□□□ 0.16
PHGDHO43175 POM121-203ENST00000434423 3750 ntAPPRIS ALT2 TSL 5 BASIC16.03■□□□□ 0.16
PHGDHO43175 Z98749.3-201ENST00000400206 1770 ntAPPRIS P1 TSL 2 BASIC16.03■□□□□ 0.16
Retrieved 100 of 98,524 protein–RNA pairs in 53.9 ms