Protein–RNA interactions for Protein: O15050

TRANK1, TPR and ankyrin repeat-containing protein 1, humanhuman

Predictions only

Length 2,925 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRANK1O15050 AC124301.1-201ENST00000524885 602 ntTSL 3 BASIC16.52■□□□□ 0.24
TRANK1O15050 AP003171.2-201ENST00000528208 925 ntBASIC16.52■□□□□ 0.24
TRANK1O15050 ZFAND6-211ENST00000559157 1559 ntTSL 2 BASIC16.52■□□□□ 0.24
TRANK1O15050 TXNDC17-202ENST00000570330 459 ntTSL 2 BASIC16.52■□□□□ 0.24
TRANK1O15050 MIR6756-201ENST00000616240 63 ntBASIC16.52■□□□□ 0.24
TRANK1O15050 AC100757.4-201ENST00000626934 759 ntBASIC16.52■□□□□ 0.24
TRANK1O15050 LSM12-204ENST00000591247 2484 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
TRANK1O15050 NEU3-206ENST00000532963 1643 ntTSL 2 BASIC16.52■□□□□ 0.24
TRANK1O15050 ACSM2A-213ENST00000575690 2322 ntAPPRIS P1 TSL 2 BASIC16.52■□□□□ 0.24
TRANK1O15050 TTLL10-202ENST00000379289 2259 ntAPPRIS P1 TSL 2 BASIC16.52■□□□□ 0.24
TRANK1O15050 MGAT1-203ENST00000393340 3077 ntAPPRIS P1 TSL 2 BASIC16.52■□□□□ 0.24
TRANK1O15050 TNNT2-206ENST00000367320 1007 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
TRANK1O15050 AL391832.2-201ENST00000418557 889 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
TRANK1O15050 SRSF10-211ENST00000484146 1089 ntTSL 2 BASIC16.52■□□□□ 0.24
TRANK1O15050 ANAPC13-205ENST00000511751 896 ntAPPRIS P1 TSL 3 BASIC16.52■□□□□ 0.24
TRANK1O15050 NCK2-206ENST00000522586 490 ntTSL 5 BASIC16.52■□□□□ 0.24
TRANK1O15050 NSMAF-202ENST00000427130 3371 ntTSL 2 BASIC16.52■□□□□ 0.24
TRANK1O15050 TRIML1-201ENST00000332517 1797 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
TRANK1O15050 ANP32A-203ENST00000465139 2440 ntAPPRIS P2 TSL 1 (best) BASIC16.52■□□□□ 0.24
TRANK1O15050 TAF6-209ENST00000452041 2297 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
TRANK1O15050 Z98749.3-201ENST00000400206 1770 ntAPPRIS P1 TSL 2 BASIC16.52■□□□□ 0.23
TRANK1O15050 CHRDL1-205ENST00000482160 1537 ntTSL 2 BASIC16.52■□□□□ 0.23
TRANK1O15050 CAPZB-201ENST00000264202 858 ntAPPRIS P3 TSL 1 (best) BASIC16.52■□□□□ 0.23
TRANK1O15050 CALCA-201ENST00000331587 843 ntTSL 1 (best) BASIC16.52■□□□□ 0.23
TRANK1O15050 TNFAIP8L2-201ENST00000368910 1178 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
TRANK1O15050 TMEM107-203ENST00000431792 455 ntTSL 3 BASIC16.52■□□□□ 0.23
TRANK1O15050 AL590617.2-201ENST00000432673 917 ntTSL 3 BASIC16.52■□□□□ 0.23
TRANK1O15050 AC018680.1-202ENST00000500324 525 ntTSL 3 BASIC16.52■□□□□ 0.23
TRANK1O15050 AL049795.2-201ENST00000515055 667 ntTSL 2 BASIC16.52■□□□□ 0.23
TRANK1O15050 AP000439.4-201ENST00000567742 664 ntTSL 3 BASIC16.52■□□□□ 0.23
TRANK1O15050 GRIA3-205ENST00000611689 936 ntTSL 1 (best) BASIC16.52■□□□□ 0.23
TRANK1O15050 FP565260.3-204ENST00000623795 2238 ntTSL 2 BASIC16.52■□□□□ 0.23
TRANK1O15050 ADAM22-202ENST00000398201 2784 ntAPPRIS ALT2 TSL 1 (best) BASIC16.51■□□□□ 0.23
TRANK1O15050 PODNL1-202ENST00000339560 2165 ntAPPRIS P3 TSL 1 (best) BASIC16.51■□□□□ 0.23
TRANK1O15050 PLA1A-201ENST00000273371 1786 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
TRANK1O15050 ADCYAP1R1-203ENST00000409363 1889 ntAPPRIS ALT2 TSL 1 (best) BASIC16.51■□□□□ 0.23
TRANK1O15050 PPP1R3B-202ENST00000519699 2334 ntAPPRIS P1 TSL 2 BASIC16.51■□□□□ 0.23
TRANK1O15050 DBNDD2-201ENST00000357275 1036 ntAPPRIS P1 TSL 5 BASIC16.51■□□□□ 0.23
TRANK1O15050 FAM24B-202ENST00000368898 745 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
TRANK1O15050 UBL4A-201ENST00000369653 711 ntTSL 3 BASIC16.51■□□□□ 0.23
TRANK1O15050 GABARAPL2-201ENST00000037243 1002 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
TRANK1O15050 STX1A-202ENST00000395154 1022 ntTSL 3 BASIC16.51■□□□□ 0.23
TRANK1O15050 RN7SL774P-201ENST00000577467 290 ntBASIC16.51■□□□□ 0.23
TRANK1O15050 C7orf33-201ENST00000307003 1354 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
TRANK1O15050 RAPH1-211ENST00000457812 2673 ntAPPRIS ALT2 TSL 2 BASIC16.51■□□□□ 0.23
TRANK1O15050 ATP6AP2-215ENST00000636409 1962 ntAPPRIS ALT2 TSL 2 BASIC16.51■□□□□ 0.23
TRANK1O15050 SH3GLB2-205ENST00000416629 1415 ntTSL 5 BASIC16.51■□□□□ 0.23
TRANK1O15050 TCF7-218ENST00000520958 1408 ntTSL 2 BASIC16.51■□□□□ 0.23
TRANK1O15050 RAB4B-EGLN2-201ENST00000594136 2554 ntAPPRIS P1 TSL 2 BASIC16.51■□□□□ 0.23
TRANK1O15050 CLCF1-201ENST00000312438 1844 ntAPPRIS P3 TSL 1 (best) BASIC16.51■□□□□ 0.23
TRANK1O15050 CLEC18B-206ENST00000620745 1847 ntTSL 5 BASIC16.51■□□□□ 0.23
TRANK1O15050 SYCE2-201ENST00000293695 1231 ntAPPRIS P2 TSL 1 (best) BASIC16.51■□□□□ 0.23
TRANK1O15050 MRPS22-201ENST00000310776 1120 ntAPPRIS P2 TSL 1 (best) BASIC16.51■□□□□ 0.23
TRANK1O15050 DBI-203ENST00000393103 599 ntAPPRIS P4 TSL 1 (best) BASIC16.51■□□□□ 0.23
TRANK1O15050 ACTG1P2-201ENST00000415776 1125 ntBASIC16.51■□□□□ 0.23
TRANK1O15050 ACTG1P11-201ENST00000425411 1125 ntBASIC16.51■□□□□ 0.23
TRANK1O15050 PSORS1C1-206ENST00000547221 655 ntAPPRIS ALT2 TSL 3 BASIC16.51■□□□□ 0.23
TRANK1O15050 TPGS2-209ENST00000589049 1102 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
TRANK1O15050 AC004834.1-204ENST00000640670 1055 ntTSL 5 BASIC16.51■□□□□ 0.23
TRANK1O15050 CERNA1-202ENST00000560518 1972 ntTSL 2 BASIC16.51■□□□□ 0.23
TRANK1O15050 CDCA5-201ENST00000275517 2587 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
TRANK1O15050 CNNM3-201ENST00000305510 3447 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
TRANK1O15050 GPER1-206ENST00000617001 1900 ntTSL 5 BASIC16.51■□□□□ 0.23
TRANK1O15050 RGR-201ENST00000358110 1349 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
TRANK1O15050 OBSL1-201ENST00000289656 2274 ntTSL 5 BASIC16.5■□□□□ 0.23
TRANK1O15050 SAR1B-208ENST00000507419 2287 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
TRANK1O15050 SQOR-208ENST00000568606 1792 ntAPPRIS P1 TSL 5 BASIC16.5■□□□□ 0.23
TRANK1O15050 KRTAP21-2-201ENST00000333892 440 ntAPPRIS P1 BASIC16.5■□□□□ 0.23
TRANK1O15050 FAM27C-201ENST00000377542 616 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
TRANK1O15050 RGS5-214ENST00000429865 754 ntTSL 3 BASIC16.5■□□□□ 0.23
TRANK1O15050 AC093151.3-202ENST00000445073 709 ntTSL 3 BASIC16.5■□□□□ 0.23
TRANK1O15050 PCBP4-205ENST00000461554 2147 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
TRANK1O15050 SZRD1-203ENST00000471507 892 ntAPPRIS ALT1 TSL 2 BASIC16.5■□□□□ 0.23
TRANK1O15050 PDCD6-202ENST00000505221 672 ntTSL 3 BASIC16.5■□□□□ 0.23
TRANK1O15050 SDHD-202ENST00000525291 790 ntTSL 3 BASIC16.5■□□□□ 0.23
TRANK1O15050 ANAPC15-208ENST00000538393 867 ntAPPRIS P3 TSL 2 BASIC16.5■□□□□ 0.23
TRANK1O15050 AC015660.1-201ENST00000560103 395 ntTSL 3 BASIC16.5■□□□□ 0.23
TRANK1O15050 TRAPPC2L-206ENST00000564365 1060 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
TRANK1O15050 IGHV3OR16-8-201ENST00000565407 349 ntAPPRIS P1 BASIC16.5■□□□□ 0.23
TRANK1O15050 AC136428.1-201ENST00000569103 349 ntAPPRIS P1 TSL 5 BASIC16.5■□□□□ 0.23
TRANK1O15050 AC008805.2-201ENST00000590069 435 ntTSL 5 BASIC16.5■□□□□ 0.23
TRANK1O15050 PYY-202ENST00000592796 580 ntAPPRIS ALT1 TSL 1 (best) BASIC16.5■□□□□ 0.23
TRANK1O15050 AC011510.1-201ENST00000598541 286 ntTSL 3 BASIC16.5■□□□□ 0.23
TRANK1O15050 AL353726.2-201ENST00000623259 884 ntBASIC16.5■□□□□ 0.23
TRANK1O15050 FADS3-207ENST00000527697 1640 ntTSL 5 BASIC16.5■□□□□ 0.23
TRANK1O15050 FAM192A-201ENST00000309137 2848 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
TRANK1O15050 ATP6V0E2-203ENST00000456496 2722 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
TRANK1O15050 ATP6V0E2-213ENST00000615196 2727 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
TRANK1O15050 IGFBP3-203ENST00000381086 2322 ntTSL 2 BASIC16.5■□□□□ 0.23
TRANK1O15050 FAM213B-201ENST00000378424 2765 ntAPPRIS ALT2 TSL 5 BASIC16.5■□□□□ 0.23
TRANK1O15050 ERCC1-203ENST00000340192 949 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
TRANK1O15050 FAM177A1-202ENST00000382406 858 ntAPPRIS ALT2 TSL 1 (best) BASIC16.5■□□□□ 0.23
TRANK1O15050 ZMYND10-AS1-201ENST00000440013 250 ntTSL 3 BASIC16.5■□□□□ 0.23
TRANK1O15050 ATP6V0CP2-201ENST00000469409 207 ntBASIC16.5■□□□□ 0.23
TRANK1O15050 AC024681.1-201ENST00000521917 487 ntBASIC16.5■□□□□ 0.23
TRANK1O15050 PAX5-211ENST00000522003 1019 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
TRANK1O15050 TPO-215ENST00000539820 1157 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
TRANK1O15050 PRKXP1-201ENST00000561423 1122 ntBASIC16.5■□□□□ 0.23
TRANK1O15050 NAT9-212ENST00000581136 1011 ntAPPRIS P1 TSL 2 BASIC16.5■□□□□ 0.23
TRANK1O15050 AC063977.3-201ENST00000597569 547 ntTSL 4 BASIC16.5■□□□□ 0.23
Retrieved 100 of 98,524 protein–RNA pairs in 34.8 ms