Protein–RNA interactions for Protein: O14543

SOCS3, Suppressor of cytokine signaling 3, humanhuman

Predictions only

Length 225 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SOCS3O14543 PITPNA-201ENST00000313486 3912 ntAPPRIS P2 TSL 5 BASIC12.15□□□□□ -0.47
SOCS3O14543 OSBPL10-201ENST00000396556 6600 ntAPPRIS P3 TSL 1 (best) BASIC12.15□□□□□ -0.47
SOCS3O14543 FAM227B-201ENST00000299338 2008 ntAPPRIS P3 TSL 2 BASIC12.15□□□□□ -0.47
SOCS3O14543 AC019205.2-202ENST00000441363 2403 ntTSL 5 BASIC12.15□□□□□ -0.47
SOCS3O14543 XPO5-201ENST00000265351 5364 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.47
SOCS3O14543 RNF31-201ENST00000324103 3627 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.47
SOCS3O14543 NKIRAS1-208ENST00000443659 2391 ntAPPRIS P2 TSL 5 BASIC12.14□□□□□ -0.47
SOCS3O14543 ADORA1-204ENST00000367236 3407 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
SOCS3O14543 GDF2-201ENST00000581492 1955 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
SOCS3O14543 C1orf43-202ENST00000362076 1551 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
SOCS3O14543 CEP170B-203ENST00000453495 6813 ntAPPRIS ALT2 TSL 5 BASIC12.14□□□□□ -0.47
SOCS3O14543 VOPP1-207ENST00000428648 2866 ntTSL 2 BASIC12.14□□□□□ -0.47
SOCS3O14543 TMEM53-203ENST00000372242 1846 ntTSL 3 BASIC12.14□□□□□ -0.47
SOCS3O14543 CCHCR1-202ENST00000396263 2490 ntTSL 5 BASIC12.14□□□□□ -0.47
SOCS3O14543 NWD2-201ENST00000309447 8325 ntAPPRIS P1 TSL 5 BASIC12.14□□□□□ -0.47
SOCS3O14543 LMNB2-201ENST00000325327 4671 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
SOCS3O14543 WDR1-202ENST00000382451 2722 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
SOCS3O14543 B3GNT4-206ENST00000546192 2749 ntAPPRIS P1 TSL 2 BASIC12.14□□□□□ -0.47
SOCS3O14543 BRSK1-202ENST00000326848 2095 ntTSL 5 BASIC12.14□□□□□ -0.47
SOCS3O14543 RAB3IP-202ENST00000362025 2055 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
SOCS3O14543 RNLS-201ENST00000331772 1447 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
SOCS3O14543 PCDHA4-203ENST00000530339 5251 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
SOCS3O14543 TK2-203ENST00000451102 3738 ntAPPRIS ALT2 TSL 1 (best) BASIC12.14□□□□□ -0.47
SOCS3O14543 FAM222B-202ENST00000452648 2836 ntAPPRIS P1 TSL 2 BASIC12.14□□□□□ -0.47
SOCS3O14543 SLC2A13-202ENST00000380858 3082 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
SOCS3O14543 CCDC144B-202ENST00000445752 2197 ntTSL 2 BASIC12.14□□□□□ -0.47
SOCS3O14543 CRYBA2-201ENST00000295728 893 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
SOCS3O14543 SPACA4-201ENST00000321762 972 ntAPPRIS P1 BASIC12.14□□□□□ -0.47
SOCS3O14543 BAX-203ENST00000354470 433 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
SOCS3O14543 NDUFA4L2-201ENST00000393825 1186 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
SOCS3O14543 C21orf33-205ENST00000427803 1077 ntTSL 2 BASIC12.14□□□□□ -0.47
SOCS3O14543 TTC28-AS1-213ENST00000434221 972 ntTSL 3 BASIC12.14□□□□□ -0.47
SOCS3O14543 SPCS2P4-201ENST00000436160 681 ntBASIC12.14□□□□□ -0.47
SOCS3O14543 AL390729.1-201ENST00000456651 587 ntTSL 2 BASIC12.14□□□□□ -0.47
SOCS3O14543 NTMT1-205ENST00000459968 1123 ntTSL 2 BASIC12.14□□□□□ -0.47
SOCS3O14543 HELT-204ENST00000515777 841 ntAPPRIS P4 TSL 1 (best) BASIC12.14□□□□□ -0.47
SOCS3O14543 EHF-205ENST00000527935 557 ntTSL 2 BASIC12.14□□□□□ -0.47
SOCS3O14543 AP000763.4-201ENST00000544674 752 ntTSL 5 BASIC12.14□□□□□ -0.47
SOCS3O14543 RNF34-208ENST00000555076 593 ntTSL 3 BASIC12.14□□□□□ -0.47
SOCS3O14543 AL137786.1-202ENST00000555496 789 ntTSL 5 BASIC12.14□□□□□ -0.47
SOCS3O14543 LINC01225-203ENST00000563550 1244 ntBASIC12.14□□□□□ -0.47
SOCS3O14543 SNHG15-206ENST00000580528 1073 ntTSL 2 BASIC12.14□□□□□ -0.47
SOCS3O14543 AC024267.1-201ENST00000582320 895 ntBASIC12.14□□□□□ -0.47
SOCS3O14543 HNRNPDL-206ENST00000602300 1291 ntAPPRIS ALT2 TSL 1 (best) BASIC12.14□□□□□ -0.47
SOCS3O14543 AC026120.1-201ENST00000611536 926 ntBASIC12.14□□□□□ -0.47
SOCS3O14543 AL355974.2-201ENST00000614099 556 ntTSL 4 BASIC12.14□□□□□ -0.47
SOCS3O14543 AL355974.2-202ENST00000617298 936 ntTSL 3 BASIC12.14□□□□□ -0.47
SOCS3O14543 AC254562.3-201ENST00000626627 631 ntTSL 5 BASIC12.14□□□□□ -0.47
SOCS3O14543 PSMD5-203ENST00000373904 1538 ntTSL 2 BASIC12.14□□□□□ -0.47
SOCS3O14543 PCBP4-202ENST00000355852 2015 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
SOCS3O14543 NSUN5-203ENST00000428206 2269 ntAPPRIS ALT2 TSL 2 BASIC12.14□□□□□ -0.47
SOCS3O14543 PEX5-206ENST00000434354 2253 ntTSL 2 BASIC12.14□□□□□ -0.47
SOCS3O14543 WARS-232ENST00000556645 2508 ntTSL 5 BASIC12.14□□□□□ -0.47
SOCS3O14543 CBX8-201ENST00000269385 3791 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
SOCS3O14543 PPP1R15A-201ENST00000200453 2378 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
SOCS3O14543 SEMA7A-201ENST00000261918 3885 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
SOCS3O14543 LILRB5-202ENST00000345866 1864 ntTSL 2 BASIC12.14□□□□□ -0.47
SOCS3O14543 CGREF1-205ENST00000404694 1376 ntAPPRIS ALT2 TSL 2 BASIC12.14□□□□□ -0.47
SOCS3O14543 ADAM15-208ENST00000447332 2146 ntAPPRIS ALT2 TSL 2 BASIC12.14□□□□□ -0.47
SOCS3O14543 AL121845.3-201ENST00000490623 3119 ntTSL 5 BASIC12.14□□□□□ -0.47
SOCS3O14543 CPEB2-209ENST00000538197 6878 ntAPPRIS P4 TSL 5 BASIC12.14□□□□□ -0.47
SOCS3O14543 RUNX1T1-251ENST00000615601 7372 ntAPPRIS ALT1 TSL 5 BASIC12.14□□□□□ -0.47
SOCS3O14543 ST6GALNAC6-216ENST00000622357 2396 ntAPPRIS ALT1 TSL 1 (best) BASIC12.14□□□□□ -0.47
SOCS3O14543 AC009802.1-201ENST00000637973 1609 ntTSL 5 BASIC12.14□□□□□ -0.47
SOCS3O14543 LONRF3-201ENST00000304778 2989 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
SOCS3O14543 AC134407.2-201ENST00000625089 1978 ntBASIC12.14□□□□□ -0.47
SOCS3O14543 SERPINF2-203ENST00000450523 1462 ntTSL 2 BASIC12.14□□□□□ -0.47
SOCS3O14543 KCNC2-209ENST00000550433 2931 ntAPPRIS ALT2 TSL 1 (best) BASIC12.14□□□□□ -0.47
SOCS3O14543 SEPT8-205ENST00000378701 1817 ntTSL 2 BASIC12.14□□□□□ -0.47
SOCS3O14543 ALDH2-202ENST00000416293 1572 ntTSL 2 BASIC12.13□□□□□ -0.47
SOCS3O14543 ST3GAL2-201ENST00000342907 4450 ntAPPRIS P1 TSL 5 BASIC12.13□□□□□ -0.47
SOCS3O14543 CTPS2-201ENST00000359276 3629 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
SOCS3O14543 ETV2-205ENST00000479824 1342 ntAPPRIS ALT2 TSL 1 (best) BASIC12.13□□□□□ -0.47
SOCS3O14543 CELF3-201ENST00000290583 3246 ntAPPRIS P3 TSL 1 (best) BASIC12.13□□□□□ -0.47
SOCS3O14543 STOML1-204ENST00000541638 6336 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
SOCS3O14543 DEPDC7-202ENST00000311388 2012 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
SOCS3O14543 IFT140-201ENST00000361339 2987 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
SOCS3O14543 NFATC4-206ENST00000539237 5686 ntAPPRIS ALT2 TSL 1 (best) BASIC12.13□□□□□ -0.47
SOCS3O14543 ZNF135-202ENST00000359978 2120 ntTSL 2 BASIC12.13□□□□□ -0.47
SOCS3O14543 GMPPA-202ENST00000341142 1524 ntAPPRIS P1 TSL 5 BASIC12.13□□□□□ -0.47
SOCS3O14543 C18orf25-206ENST00000619301 5264 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
SOCS3O14543 TMEM140-201ENST00000275767 1997 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
SOCS3O14543 PDLIM7-201ENST00000355572 977 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
SOCS3O14543 MIR346-201ENST00000362234 95 ntBASIC12.13□□□□□ -0.47
SOCS3O14543 S100A16-204ENST00000368706 1118 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
SOCS3O14543 FAM220BP-201ENST00000377689 816 ntBASIC12.13□□□□□ -0.47
SOCS3O14543 PMP22-202ENST00000395936 816 ntTSL 3 BASIC12.13□□□□□ -0.47
SOCS3O14543 MIR940-201ENST00000401276 94 ntBASIC12.13□□□□□ -0.47
SOCS3O14543 PABPN1L-201ENST00000411789 873 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
SOCS3O14543 LINC00029-202ENST00000414668 1117 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
SOCS3O14543 ACTG1P14-201ENST00000446382 1122 ntBASIC12.13□□□□□ -0.47
SOCS3O14543 SS18L2-202ENST00000447630 1047 ntAPPRIS P1 TSL 2 BASIC12.13□□□□□ -0.47
SOCS3O14543 LINC01640-201ENST00000452505 550 ntTSL 4 BASIC12.13□□□□□ -0.47
SOCS3O14543 AL391335.1-201ENST00000504583 535 ntTSL 4 BASIC12.13□□□□□ -0.47
SOCS3O14543 POLD2P1-201ENST00000511220 997 ntBASIC12.13□□□□□ -0.47
SOCS3O14543 KRT8P48-201ENST00000515599 1220 ntBASIC12.13□□□□□ -0.47
SOCS3O14543 C17orf49-203ENST00000546760 764 ntTSL 5 BASIC12.13□□□□□ -0.47
SOCS3O14543 AP000842.3-202ENST00000569238 1080 ntBASIC12.13□□□□□ -0.47
SOCS3O14543 ELOF1-204ENST00000587806 1172 ntTSL 2 BASIC12.13□□□□□ -0.47
SOCS3O14543 ABHD17A-204ENST00000590661 1079 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
Retrieved 100 of 98,524 protein–RNA pairs in 56.9 ms