Protein–RNA interactions for Protein: A6NGU7

LINC01546, Putative uncharacterized protein encoded by LINC01546, humanhuman

Predictions only

Length 62 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01546A6NGU7 SLC25A36-203ENST00000446041 4638 ntAPPRIS P3 TSL 2 BASIC11.35□□□□□ -0.59
LINC01546A6NGU7 KMT5B-205ENST00000402789 1599 ntTSL 5 BASIC11.35□□□□□ -0.59
LINC01546A6NGU7 PAX6-276ENST00000640684 1557 ntTSL 5 BASIC11.35□□□□□ -0.59
LINC01546A6NGU7 RGS20-201ENST00000276500 1664 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
LINC01546A6NGU7 CYP1B1-AS1-201ENST00000413828 1781 ntTSL 5 BASIC11.35□□□□□ -0.59
LINC01546A6NGU7 ZNF586-202ENST00000396150 1977 ntTSL 1 (best) BASIC11.35□□□□□ -0.59
LINC01546A6NGU7 C22orf34-204ENST00000414287 2197 ntTSL 1 (best) BASIC11.35□□□□□ -0.59
LINC01546A6NGU7 SALL3-201ENST00000536229 3997 ntTSL 3 BASIC11.35□□□□□ -0.59
LINC01546A6NGU7 SCART1-206ENST00000640237 4351 ntAPPRIS P1 TSL 5 BASIC11.35□□□□□ -0.59
LINC01546A6NGU7 GLG1-201ENST00000205061 8261 ntAPPRIS P3 TSL 1 (best) BASIC11.35□□□□□ -0.59
LINC01546A6NGU7 CACNA1A-215ENST00000635727 7536 ntAPPRIS ALT2 TSL 5 BASIC11.35□□□□□ -0.59
LINC01546A6NGU7 KRT77-201ENST00000341809 3305 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
LINC01546A6NGU7 LINC01138-206ENST00000622328 2212 ntTSL 2 BASIC11.35□□□□□ -0.59
LINC01546A6NGU7 DCAF5-201ENST00000341516 5953 ntAPPRIS P3 TSL 1 (best) BASIC11.35□□□□□ -0.59
LINC01546A6NGU7 RMND5B-201ENST00000313386 1929 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
LINC01546A6NGU7 ACTL6A-202ENST00000429709 1901 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
LINC01546A6NGU7 ALDH4A1-205ENST00000538309 1940 ntTSL 2 BASIC11.35□□□□□ -0.59
LINC01546A6NGU7 PDE4DIP-201ENST00000313431 5676 ntTSL 1 (best) BASIC11.35□□□□□ -0.59
LINC01546A6NGU7 C1orf43-206ENST00000368521 1708 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
LINC01546A6NGU7 COQ6-220ENST00000629426 1538 ntTSL 5 BASIC11.35□□□□□ -0.59
LINC01546A6NGU7 TMEM120A-201ENST00000417509 1444 ntTSL 2 BASIC11.35□□□□□ -0.59
LINC01546A6NGU7 SPAG16-209ENST00000447990 1330 ntTSL 1 (best) BASIC11.35□□□□□ -0.59
LINC01546A6NGU7 AC008969.1-201ENST00000550135 6438 ntTSL 2 BASIC11.35□□□□□ -0.59
LINC01546A6NGU7 SLC52A3-202ENST00000381944 3060 ntTSL 2 BASIC11.34□□□□□ -0.59
LINC01546A6NGU7 BCR-201ENST00000305877 7082 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
LINC01546A6NGU7 SIN3B-201ENST00000248054 5037 ntAPPRIS ALT2 TSL 1 (best) BASIC11.34□□□□□ -0.59
LINC01546A6NGU7 PCSK5-205ENST00000545128 9538 ntAPPRIS ALT2 TSL 5 BASIC11.34□□□□□ -0.59
LINC01546A6NGU7 TRMT1-201ENST00000221504 2179 ntAPPRIS ALT2 TSL 1 (best) BASIC11.34□□□□□ -0.59
LINC01546A6NGU7 STAU2-219ENST00000522509 2173 ntTSL 2 BASIC11.34□□□□□ -0.59
LINC01546A6NGU7 MPHOSPH10-205ENST00000498451 2068 ntTSL 1 (best) BASIC11.34□□□□□ -0.59
LINC01546A6NGU7 ZFP41-201ENST00000330701 4797 ntAPPRIS P1 TSL 2 BASIC11.34□□□□□ -0.59
LINC01546A6NGU7 MTCL1-203ENST00000400050 6042 ntAPPRIS P2 TSL 5 BASIC11.34□□□□□ -0.59
LINC01546A6NGU7 TRAF3-204ENST00000539721 1786 ntTSL 2 BASIC11.34□□□□□ -0.59
LINC01546A6NGU7 SYT12-203ENST00000525457 1678 ntAPPRIS P1 TSL 2 BASIC11.34□□□□□ -0.59
LINC01546A6NGU7 NUP54-217ENST00000514987 1563 ntTSL 2 BASIC11.34□□□□□ -0.59
LINC01546A6NGU7 ABHD11-201ENST00000222800 1483 ntAPPRIS P3 TSL 1 (best) BASIC11.34□□□□□ -0.59
LINC01546A6NGU7 BTBD1-202ENST00000379403 1467 ntTSL 5 BASIC11.34□□□□□ -0.59
LINC01546A6NGU7 ZXDA-201ENST00000358697 4113 ntAPPRIS P1 BASIC11.34□□□□□ -0.59
LINC01546A6NGU7 AKAP9-205ENST00000394564 1356 ntTSL 1 (best) BASIC11.34□□□□□ -0.59
LINC01546A6NGU7 AC233702.3-201ENST00000578656 1387 ntBASIC11.34□□□□□ -0.59
LINC01546A6NGU7 ZC3HAV1-204ENST00000471652 3182 ntTSL 1 (best) BASIC11.34□□□□□ -0.59
LINC01546A6NGU7 MAPK7-203ENST00000395602 3059 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
LINC01546A6NGU7 DPP6-203ENST00000404039 4798 ntTSL 1 (best) BASIC11.34□□□□□ -0.59
LINC01546A6NGU7 CACNG7-201ENST00000222212 1016 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
LINC01546A6NGU7 GGCT-202ENST00000275428 1173 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
LINC01546A6NGU7 TSTD1-202ENST00000368023 574 ntAPPRIS ALT2 TSL 2 BASIC11.34□□□□□ -0.59
LINC01546A6NGU7 MADCAM1-203ENST00000382683 603 ntTSL 1 (best) BASIC11.34□□□□□ -0.59
LINC01546A6NGU7 MCF2L-207ENST00000397024 490 ntTSL 5 BASIC11.34□□□□□ -0.59
LINC01546A6NGU7 SMAGP-202ENST00000398453 1062 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
LINC01546A6NGU7 PLEKHB2-203ENST00000404460 1167 ntTSL 2 BASIC11.34□□□□□ -0.59
LINC01546A6NGU7 HDAC11-205ENST00000404548 577 ntTSL 4 BASIC11.34□□□□□ -0.59
LINC01546A6NGU7 GGT1-208ENST00000404920 657 ntTSL 1 (best) BASIC11.34□□□□□ -0.59
LINC01546A6NGU7 MLF1-206ENST00000471745 1266 ntTSL 2 BASIC11.34□□□□□ -0.59
LINC01546A6NGU7 GGTLC2-203ENST00000480559 657 ntTSL 1 (best) BASIC11.34□□□□□ -0.59
LINC01546A6NGU7 MTRF1LP2-201ENST00000506027 1122 ntBASIC11.34□□□□□ -0.59
LINC01546A6NGU7 CCNG1-211ENST00000512163 919 ntTSL 2 BASIC11.34□□□□□ -0.59
LINC01546A6NGU7 AC127526.4-201ENST00000527970 983 ntTSL 3 BASIC11.34□□□□□ -0.59
LINC01546A6NGU7 H2AFJ-203ENST00000544848 644 ntAPPRIS P1 BASIC11.34□□□□□ -0.59
LINC01546A6NGU7 ELAC2-212ENST00000578071 579 ntTSL 4 BASIC11.34□□□□□ -0.59
LINC01546A6NGU7 ARHGAP6-204ENST00000380718 3632 ntAPPRIS ALT2 TSL 1 (best) BASIC11.34□□□□□ -0.59
LINC01546A6NGU7 ITGB2-206ENST00000397852 2769 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
LINC01546A6NGU7 P4HA1-205ENST00000440381 2790 ntTSL 3 BASIC11.34□□□□□ -0.59
LINC01546A6NGU7 PWWP2A-201ENST00000307063 3346 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
LINC01546A6NGU7 DAAM2-211ENST00000633794 3871 ntTSL 5 BASIC11.34□□□□□ -0.59
LINC01546A6NGU7 ADI1-201ENST00000327435 2391 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
LINC01546A6NGU7 C17orf53-201ENST00000245382 2272 ntAPPRIS ALT2 TSL 1 (best) BASIC11.34□□□□□ -0.59
LINC01546A6NGU7 AC013460.1-202ENST00000435062 2253 ntTSL 2 BASIC11.34□□□□□ -0.59
LINC01546A6NGU7 EMB-204ENST00000508934 1617 ntAPPRIS ALT2 TSL 5 BASIC11.34□□□□□ -0.59
LINC01546A6NGU7 PXN-207ENST00000536957 4112 ntAPPRIS ALT2 TSL 2 BASIC11.34□□□□□ -0.59
LINC01546A6NGU7 AC007686.3-201ENST00000619017 3487 ntBASIC11.34□□□□□ -0.59
LINC01546A6NGU7 CASC2-203ENST00000435944 3270 ntTSL 1 (best) BASIC11.34□□□□□ -0.59
LINC01546A6NGU7 AMPD3-203ENST00000396554 3806 ntTSL 1 (best) BASIC11.34□□□□□ -0.59
LINC01546A6NGU7 KXD1-201ENST00000222307 1426 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
LINC01546A6NGU7 RBM14-202ENST00000393979 1426 ntTSL 1 (best) BASIC11.34□□□□□ -0.59
LINC01546A6NGU7 GAL3ST4-202ENST00000411994 1404 ntTSL 2 BASIC11.34□□□□□ -0.59
LINC01546A6NGU7 ACE3P-201ENST00000423435 1973 ntBASIC11.34□□□□□ -0.59
LINC01546A6NGU7 YME1L1-202ENST00000375972 2517 ntTSL 1 (best) BASIC11.34□□□□□ -0.59
LINC01546A6NGU7 RALGDS-202ENST00000372050 3634 ntAPPRIS P3 TSL 1 (best) BASIC11.34□□□□□ -0.59
LINC01546A6NGU7 CCNY-202ENST00000339497 4630 ntTSL 1 (best) BASIC11.34□□□□□ -0.59
LINC01546A6NGU7 TGFBR2-202ENST00000359013 4605 ntAPPRIS ALT2 TSL 1 (best) BASIC11.34□□□□□ -0.59
LINC01546A6NGU7 MPZL1-203ENST00000392121 3421 ntTSL 2 BASIC11.34□□□□□ -0.59
LINC01546A6NGU7 KDELR2-201ENST00000258739 2884 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
LINC01546A6NGU7 VANGL2-201ENST00000368061 5340 ntAPPRIS P1 TSL 2 BASIC11.33□□□□□ -0.59
LINC01546A6NGU7 SIK3-201ENST00000375300 6213 ntAPPRIS P3 TSL 2 BASIC11.33□□□□□ -0.59
LINC01546A6NGU7 CCZ1-207ENST00000628813 2218 ntTSL 2 BASIC11.33□□□□□ -0.59
LINC01546A6NGU7 MVB12B-206ENST00000489637 2666 ntTSL 1 (best) BASIC11.33□□□□□ -0.59
LINC01546A6NGU7 PCDHGB5-202ENST00000621169 2670 ntAPPRIS ALT2 BASIC11.33□□□□□ -0.59
LINC01546A6NGU7 FARS2-202ENST00000324331 1692 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
LINC01546A6NGU7 SLC17A5-201ENST00000355773 3455 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
LINC01546A6NGU7 B3GLCT-201ENST00000343307 4254 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
LINC01546A6NGU7 STAC3-206ENST00000554578 1580 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
LINC01546A6NGU7 PIGS-203ENST00000395346 2815 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
LINC01546A6NGU7 UGT3A2-201ENST00000282507 2355 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
LINC01546A6NGU7 MUTYH-210ENST00000450313 1929 ntTSL 5 BASIC11.33□□□□□ -0.6
LINC01546A6NGU7 AHSA2-202ENST00000394457 6574 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
LINC01546A6NGU7 EHF-210ENST00000531794 1481 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
LINC01546A6NGU7 LHFPL2-207ENST00000515007 4680 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
LINC01546A6NGU7 PLEKHA8P1-201ENST00000256692 1839 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
LINC01546A6NGU7 AL121757.1-201ENST00000430097 1836 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
LINC01546A6NGU7 BACE1-201ENST00000313005 6326 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Retrieved 100 of 98,524 protein–RNA pairs in 48 ms